Literature DB >> 28362436

In vivo imaging of neural activity.

Weijian Yang1, Rafael Yuste1.   

Abstract

Since the introduction of calcium imaging to monitor neuronal activity with single-cell resolution, optical imaging methods have revolutionized neuroscience by enabling systematic recordings of neuronal circuits in living animals. The plethora of methods for functional neural imaging can be daunting to the nonexpert to navigate. Here we review advanced microscopy techniques for in vivo functional imaging and offer guidelines for which technologies are best suited for particular applications.

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Year:  2017        PMID: 28362436      PMCID: PMC5903578          DOI: 10.1038/nmeth.4230

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  95 in total

1.  In vivo multiphoton microscopy of deep brain tissue.

Authors:  Michael J Levene; Daniel A Dombeck; Karl A Kasischke; Raymond P Molloy; Watt W Webb
Journal:  J Neurophysiol       Date:  2003-12-10       Impact factor: 2.714

Review 2.  Deep tissue two-photon microscopy.

Authors:  Fritjof Helmchen; Winfried Denk
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

3.  Temporal focusing with spatially modulated excitation.

Authors:  Eirini Papagiakoumou; Vincent de Sars; Valentina Emiliani; Dan Oron
Journal:  Opt Express       Date:  2009-03-30       Impact factor: 3.894

4.  Two-photon laser scanning fluorescence microscopy.

Authors:  W Denk; J H Strickler; W W Webb
Journal:  Science       Date:  1990-04-06       Impact factor: 47.728

5.  Optimizing multiphoton fluorescence microscopy light collection from living tissue by noncontact total emission detection (epiTED).

Authors:  C A Combs; A Smirnov; D Chess; D B McGavern; J L Schroeder; J Riley; S S Kang; M Lugar-Hammer; A Gandjbakhche; J R Knutson; R S Balaban
Journal:  J Microsc       Date:  2010-06-21       Impact factor: 1.758

6.  Deep tissue fluorescence imaging and in vivo biological applications.

Authors:  Viera Crosignani; Alexander Dvornikov; Jose S Aguilar; Chiara Stringari; Robert Edwards; William W Mantulin; Enrico Gratton
Journal:  J Biomed Opt       Date:  2012-11       Impact factor: 3.170

7.  Video-rate volumetric functional imaging of the brain at synaptic resolution.

Authors:  Rongwen Lu; Wenzhi Sun; Yajie Liang; Aaron Kerlin; Jens Bierfeld; Johannes D Seelig; Daniel E Wilson; Benjamin Scholl; Boaz Mohar; Masashi Tanimoto; Minoru Koyama; David Fitzpatrick; Michael B Orger; Na Ji
Journal:  Nat Neurosci       Date:  2017-02-27       Impact factor: 24.884

8.  Long-term dynamics of CA1 hippocampal place codes.

Authors:  Yaniv Ziv; Laurie D Burns; Eric D Cocker; Elizabeth O Hamel; Kunal K Ghosh; Lacey J Kitch; Abbas El Gamal; Mark J Schnitzer
Journal:  Nat Neurosci       Date:  2013-02-10       Impact factor: 24.884

9.  Simultaneous imaging of neural activity in three dimensions.

Authors:  Sean Quirin; Jesse Jackson; Darcy S Peterka; Rafael Yuste
Journal:  Front Neural Circuits       Date:  2014-04-03       Impact factor: 3.492

10.  Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain.

Authors:  Jeffrey N Stirman; Ikuko T Smith; Michael W Kudenov; Spencer L Smith
Journal:  Nat Biotechnol       Date:  2016-06-27       Impact factor: 54.908

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  112 in total

Review 1.  Playing the piano with the cortex: role of neuronal ensembles and pattern completion in perception and behavior.

Authors:  Luis Carrillo-Reid; Rafael Yuste
Journal:  Curr Opin Neurobiol       Date:  2020-04-10       Impact factor: 6.627

2.  High-speed volumetric imaging of neuronal activity in freely moving rodents.

Authors:  Oliver Skocek; Tobias Nöbauer; Lukas Weilguny; Francisca Martínez Traub; Chuying Naomi Xia; Maxim I Molodtsov; Abhinav Grama; Masahito Yamagata; Daniel Aharoni; David D Cox; Peyman Golshani; Alipasha Vaziri
Journal:  Nat Methods       Date:  2018-05-07       Impact factor: 28.547

Review 3.  WONOEP appraisal: Network concept from an imaging perspective.

Authors:  Robert C Wykes; Hui Ming Khoo; Lorenzo Caciagli; Hal Blumenfeld; Peyman Golshani; Jaideep Kapur; John M Stern; Andrea Bernasconi; Stefanie Dedeurwaerdere; Neda Bernasconi
Journal:  Epilepsia       Date:  2019-06-09       Impact factor: 5.864

Review 4.  Recent trends in two-photon auto-fluorescence lifetime imaging (2P-FLIM) and its biomedical applications.

Authors:  Harsh Ranawat; Sagnik Pal; Nirmal Mazumder
Journal:  Biomed Eng Lett       Date:  2019-07-01

5.  Brain maps at the nanoscale.

Authors:  Weijian Yang; Rafael Yuste
Journal:  Nat Biotechnol       Date:  2019-04       Impact factor: 54.908

6.  Ultrafast optical clearing method for three-dimensional imaging with cellular resolution.

Authors:  Xinpei Zhu; Limeng Huang; Yao Zheng; Yanchun Song; Qiaoqi Xu; Jiahao Wang; Ke Si; Shumin Duan; Wei Gong
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-17       Impact factor: 11.205

7.  Two-Photon Fluorescence Imaging.

Authors:  Fan Feng; Heng Mao; Aimin Wang; Liangyi Chen
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 8.  Neuronal cell-type classification: challenges, opportunities and the path forward.

Authors:  Hongkui Zeng; Joshua R Sanes
Journal:  Nat Rev Neurosci       Date:  2017-08-03       Impact factor: 34.870

Review 9.  A roadmap to integrate astrocytes into Systems Neuroscience.

Authors:  Ksenia V Kastanenka; Rubén Moreno-Bote; Maurizio De Pittà; Gertrudis Perea; Abel Eraso-Pichot; Roser Masgrau; Kira E Poskanzer; Elena Galea
Journal:  Glia       Date:  2019-05-06       Impact factor: 7.452

10.  Reduced Repertoire of Cortical Microstates and Neuronal Ensembles in Medically Induced Loss of Consciousness.

Authors:  Michael Wenzel; Shuting Han; Elliot H Smith; Erik Hoel; Bradley Greger; Paul A House; Rafael Yuste
Journal:  Cell Syst       Date:  2019-05-01       Impact factor: 10.304

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