Literature DB >> 28301293

Signatures of DNA target selectivity by ETS transcription factors.

Gregory M K Poon1,2, Hye Mi Kim1.   

Abstract

The ETS family of transcription factors is a functionally heterogeneous group of gene regulators that share a structurally conserved, eponymous DNA-binding domain. DNA target specificity derives from combinatorial interactions with other proteins as well as intrinsic heterogeneity among ETS domains. Emerging evidence suggests molecular hydration as a fundamental feature that defines the intrinsic heterogeneity in DNA target selection and susceptibility to epigenetic DNA modification. This perspective invokes novel hypotheses in the regulation of ETS proteins in physiologic osmotic stress, their pioneering potential in heterochromatin, and the effects of passive and pharmacologic DNA demethylation on ETS regulation.

Keywords:  DNA methylation; ETS transcription factors; Ets-1; PU.1; epigenetics; molecular hydration; phylogeny

Mesh:

Substances:

Year:  2017        PMID: 28301293      PMCID: PMC5501379          DOI: 10.1080/21541264.2017.1302901

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  93 in total

1.  DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition.

Authors:  B R Szymczyna; C H Arrowsmith
Journal:  J Biol Chem       Date:  2000-09-15       Impact factor: 5.157

2.  Structural studies of Ets-1/Pax5 complex formation on DNA.

Authors:  C W Garvie; J Hagman; C Wolberger
Journal:  Mol Cell       Date:  2001-12       Impact factor: 17.970

3.  Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface.

Authors:  Gregory M K Poon
Journal:  J Biol Chem       Date:  2012-04-02       Impact factor: 5.157

4.  Oncogenic ETS proteins mimic activated RAS/MAPK signaling in prostate cells.

Authors:  Peter C Hollenhorst; Mary W Ferris; Megan A Hull; Heejoon Chae; Sun Kim; Barbara J Graves
Journal:  Genes Dev       Date:  2011-10-15       Impact factor: 11.361

Review 5.  Epigenetic control of myeloid cell differentiation, identity and function.

Authors:  Damiana Álvarez-Errico; Roser Vento-Tormo; Michael Sieweke; Esteban Ballestar
Journal:  Nat Rev Immunol       Date:  2015-01       Impact factor: 53.106

6.  Gcn5 is required for PU.1-dependent IL-9 induction in Th9 cells.

Authors:  Ritobrata Goswami; Mark H Kaplan
Journal:  J Immunol       Date:  2012-08-17       Impact factor: 5.422

7.  PU.1 is a suppressor of myeloid leukemia, inactivated in mice by gene deletion and mutation of its DNA binding domain.

Authors:  Wendy D Cook; Benjamin J McCaw; Christopher Herring; Deborah L John; Simon J Foote; Stephen L Nutt; Jerry M Adams
Journal:  Blood       Date:  2004-08-10       Impact factor: 22.113

8.  The transcription factor PU.1 is required for the development of IL-9-producing T cells and allergic inflammation.

Authors:  Hua-Chen Chang; Sarita Sehra; Ritobrata Goswami; Weiguo Yao; Qing Yu; Gretta L Stritesky; Rukhsana Jabeen; Carl McKinley; Ayele-Nati Ahyi; Ling Han; Evelyn T Nguyen; Michael J Robertson; Narayanan B Perumal; Robert S Tepper; Stephen L Nutt; Mark H Kaplan
Journal:  Nat Immunol       Date:  2010-05-02       Impact factor: 25.606

9.  Dynamic regulation of PU.1 expression in multipotent hematopoietic progenitors.

Authors:  Stephen L Nutt; Donald Metcalf; Angela D'Amico; Matthew Polli; Li Wu
Journal:  J Exp Med       Date:  2005-01-17       Impact factor: 14.307

Review 10.  Pioneer transcription factors in cell reprogramming.

Authors:  Makiko Iwafuchi-Doi; Kenneth S Zaret
Journal:  Genes Dev       Date:  2014-12-15       Impact factor: 11.361

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  5 in total

1.  Multiple DNA-binding modes for the ETS family transcription factor PU.1.

Authors:  Shingo Esaki; Marina G Evich; Noa Erlitzki; Markus W Germann; Gregory M K Poon
Journal:  J Biol Chem       Date:  2017-08-08       Impact factor: 5.157

2.  Mechanism of cognate sequence discrimination by the ETS-family transcription factor ETS-1.

Authors:  Kenneth Huang; Suela Xhani; Amanda V Albrecht; Van L T Ha; Shingo Esaki; Gregory M K Poon
Journal:  J Biol Chem       Date:  2019-05-02       Impact factor: 5.157

3.  Mapping interfacial hydration in ETS-family transcription factor complexes with DNA: a chimeric approach.

Authors:  Amanda V Albrecht; Hye Mi Kim; Gregory M K Poon
Journal:  Nucleic Acids Res       Date:  2018-11-16       Impact factor: 16.971

4.  Analysis of the Differentially Expressed Genes Induced by Cisplatin Resistance in Oral Squamous Cell Carcinomas and Their Interaction.

Authors:  Hua-Tao Wu; Wen-Tian Chen; Guan-Wu Li; Jia-Xin Shen; Qian-Qian Ye; Man-Li Zhang; Wen-Jia Chen; Jing Liu
Journal:  Front Genet       Date:  2020-01-23       Impact factor: 4.599

5.  Human autoinflammatory disease reveals ELF4 as a transcriptional regulator of inflammation.

Authors:  Paul M Tyler; Molly L Bucklin; Mengting Zhao; Timothy J Maher; Andrew J Rice; Weizhen Ji; Neil Warner; Jie Pan; Raffaella Morotti; Paul McCarthy; Anne Griffiths; Annemarie M C van Rossum; Iris H I M Hollink; Virgil A S H Dalm; Jason Catanzaro; Saquib A Lakhani; Aleixo M Muise; Carrie L Lucas
Journal:  Nat Immunol       Date:  2021-07-29       Impact factor: 25.606

  5 in total

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