| Literature DB >> 32038705 |
Hua-Tao Wu1, Wen-Tian Chen2, Guan-Wu Li3, Jia-Xin Shen4, Qian-Qian Ye2,5, Man-Li Zhang5, Wen-Jia Chen2,5, Jing Liu2,5.
Abstract
BACKGROUND: Oral squamous cell carcinoma (OSCC) is a solid tumor, which originates from squamous epithelium, with about 400,000 new-cases/year worldwidely. Presently, chemoradiotherapy is the most important adjuvant treatment for OSCC, mostly in advanced tumors. However, clinical resistance to chemotherapy still leads to poor prognosis of OSCC patients. Via high-throughput analysis of gene expression database of OSCC, we investigated the molecular mechanisms underlying cisplatin resistance in OSCC, analyzing the differentially expressed genes (DEGs) and their regulatory relationship, to clarify the molecular basis of OSCC chemotherapy resistance and provide a theoretical foundation for the treatment of patients with OSCC and individualized therapeutic targets accurately.Entities:
Keywords: cisplatin; differentially expressed genes; miRNA; oral squamous cell carcinomas; resistance
Year: 2020 PMID: 32038705 PMCID: PMC6989555 DOI: 10.3389/fgene.2019.01328
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Figure 1Identification of cisplatin-resistant DEGs in OSCC. (A) Volcano map of GSE111585. (B) Volcano map of GSE115119. (C) 48 up-regulated DEGs was selected based on the intersection between up-regulated gene in GSE111585/GSE115119 and oncogenes. (D) Forty-nine down-regulated DEGs was selected based on the intersection between down-regulated gene in GSE111585/GSE115119 and tumor-suppressor genes.
Figure 2Functional enrichment analysis of cisplatin-resistant DEGs in OSCC. (A) BP analysis of up-regulated DEGs. (B) BP analysis of down-regulated DEGs. (C) MF analysis of up-regulated DEGs. (D) MF analysis of down-regulated DEGs. (E) CC analysis of up-regulated DEGs. (F) CC analysis of down-regulated DEGs.
Figure 3KEGG pathway analysis of cisplatin-resistant DEGs in OSCC. (A) KEGG of up-regulated DEGs. (B) KEGG of down-regulated DEGs.
Figure 4The PPI network of DEGs with Hub score. The dark color indicates high hub score, and the light color predicts low hub score.
Figure 5The construction of miRNA–mRNA network of hub genes in OSCC. The red circles predicted the potential miRNAs that can regulate multiple hub genes in OCSS.
Figure 6The mRNA expression pattern of hub genes in OSCC. (A) The expression of CTNNB1 was increased in OSCC tissues, compared with normal tissues. (B) The expression of ETS1 was increased in OSCC tissues, compared with normal tissues.
Figure 7The survival value of the expression of hub genes in cisplatin-resistant OSCC. (A) NOTCH1. (B) JUN. (C) CTNNB1. (D) CEBPA. (E) ETS1.
Figure 8The survival value of the mutations of hub genes in cisplatin-resistant OSCC. (A) NOTCH1. (B) JUN. (C) CTNNB1. (D) CEBPA. (E) ETS1.