Literature DB >> 28286005

Overall Shapes of the SMC-ScpAB Complex Are Determined by Balance between Constraint and Relaxation of Its Structural Parts.

Katsuhiko Kamada1, Masayuki Su'etsugu2, Hiraku Takada2, Makoto Miyata3, Tatsuya Hirano4.   

Abstract

The SMC-ScpAB complex plays a crucial role in chromosome organization and segregation in many bacteria. It is composed of a V-shaped SMC dimer and an ScpAB subcomplex that bridges the two Structural Maintenance of Chromosomes (SMC) head domains. Despite its functional significance, the mechanistic details of SMC-ScpAB remain obscure. Here we provide evidence that ATP-dependent head-head engagement induces a lever movement of the SMC neck region, which might help to separate juxtaposed coiled-coil arms. Binding of the ScpA N-terminal domain (NTD) to the SMC neck region is negatively regulated by the ScpB C-terminal domain. Mutations in the ScpA NTD compromise this regulation and profoundly affect the overall shape of the complex. The SMC hinge domain is structurally relaxed when free from coiled-coil juxtaposition. Taken together, we propose that the structural parts of SMC-ScpAB are subjected to the balance between constraint and relaxation, cooperating to modulate dynamic conformational changes of the whole complex.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  ATPase; Bacillus subtilis; Condensin; SMC; ScpA; ScpB; chromosome organization; segregation

Mesh:

Substances:

Year:  2017        PMID: 28286005     DOI: 10.1016/j.str.2017.02.008

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  21 in total

Review 1.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

2.  Deciphering the structure of the condensin protein complex.

Authors:  Dana Krepel; Ryan R Cheng; Michele Di Pierro; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-01       Impact factor: 11.205

3.  Bacterial chromosome organization by collective dynamics of SMC condensins.

Authors:  Christiaan A Miermans; Chase P Broedersz
Journal:  J R Soc Interface       Date:  2018-10-17       Impact factor: 4.118

4.  Transient DNA Occupancy of the SMC Interarm Space in Prokaryotic Condensin.

Authors:  Roberto Vazquez Nunez; Laura B Ruiz Avila; Stephan Gruber
Journal:  Mol Cell       Date:  2019-06-11       Impact factor: 17.970

5.  Three-dimensional loop extrusion.

Authors:  Andrea Bonato; Davide Michieletto
Journal:  Biophys J       Date:  2021-11-15       Impact factor: 4.033

Review 6.  A tethered-inchworm model of SMC DNA translocation.

Authors:  Michael H Nichols; Victor G Corces
Journal:  Nat Struct Mol Biol       Date:  2018-09-24       Impact factor: 15.369

Review 7.  Structural insights into DNA loop extrusion by SMC protein complexes.

Authors:  Sumanjit Datta; Léa Lecomte; Christian H Haering
Journal:  Curr Opin Struct Biol       Date:  2020-07-13       Impact factor: 6.809

8.  Structure Basis for Shaping the Nse4 Protein by the Nse1 and Nse3 Dimer within the Smc5/6 Complex.

Authors:  Aera Jo; Shibai Li; Jin Woo Shin; Xiaolan Zhao; Yunje Cho
Journal:  J Mol Biol       Date:  2021-03-04       Impact factor: 5.469

9.  Structure of Full-Length SMC and Rearrangements Required for Chromosome Organization.

Authors:  Marie-Laure Diebold-Durand; Hansol Lee; Laura B Ruiz Avila; Haemin Noh; Ho-Chul Shin; Haeri Im; Florian P Bock; Frank Bürmann; Alexandre Durand; Alrun Basfeld; Sihyun Ham; Jérôme Basquin; Byung-Ha Oh; Stephan Gruber
Journal:  Mol Cell       Date:  2017-07-06       Impact factor: 17.970

10.  The Protein Interactome of Streptococcus pneumoniae and Bacterial Meta-interactomes Improve Function Predictions.

Authors:  S Wuchty; S V Rajagopala; S M Blazie; J R Parrish; S Khuri; R L Finley; P Uetz
Journal:  mSystems       Date:  2017-06-06       Impact factor: 6.496

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