Literature DB >> 28280626

Current companion diagnostics in advanced colorectal cancer; getting a bigger and better piece of the pie.

Jonathan M Loree1, Scott Kopetz1, Kanwal P S Raghav1.   

Abstract

While the treatment of colorectal cancer continues to rely heavily on conventional cytotoxic therapy, an increasing number of targeted agents are under development. Many of these treatments require companion diagnostic tests in order to define an appropriate population that will derive benefit. In addition, a growing number of biomarkers provide prognostic information about a patient's malignancy. As we learn more about these biomarkers and their assays, selecting the appropriate companion diagnostic becomes increasingly important. In the case of many biomarkers, there are numerous assays which could provide the same information to a treating physician, however each assay has strengths and weaknesses. Institutions must balance cost, assay sensitivity, turn-around time, and labor resources when selecting which assay to offer. In this review we will discuss the current state of companion diagnostics available in metastatic colorectal cancer and explore emerging biomarkers and their assays. We will focus on KRAS, BRAF, HER2, and PIK3CA testing, as well as microsatellite stability assessment and multigene panels.

Entities:  

Keywords:  Colorectal cancer; biomarker; companion diagnostic; next generation sequencing (NGS)

Year:  2017        PMID: 28280626      PMCID: PMC5334060          DOI: 10.21037/jgo.2017.01.01

Source DB:  PubMed          Journal:  J Gastrointest Oncol        ISSN: 2078-6891


  123 in total

1.  Optimized allele-specific real-time PCR assays for the detection of common mutations in KRAS and BRAF.

Authors:  Alois H Lang; Heinz Drexel; Simone Geller-Rhomberg; Nicole Stark; Thomas Winder; Kathrin Geiger; Axel Muendlein
Journal:  J Mol Diagn       Date:  2010-12-23       Impact factor: 5.568

2.  BRAFV600E immunohistochemistry facilitates universal screening of colorectal cancers for Lynch syndrome.

Authors:  Christopher W Toon; Michael D Walsh; Angela Chou; David Capper; Adele Clarkson; Loretta Sioson; Stephen Clarke; Scott Mead; Rhiannon J Walters; Mark Clendenning; Christophe Rosty; Joanne P Young; Aung Ko Win; John L Hopper; Ashley Crook; Andreas von Deimling; Mark A Jenkins; Daniel D Buchanan; Anthony J Gill
Journal:  Am J Surg Pathol       Date:  2013-10       Impact factor: 6.394

3.  Non-invasive sensitive detection of KRAS and BRAF mutation in circulating tumor cells of colorectal cancer patients.

Authors:  Nur-Afidah Mohamed Suhaimi; Yu Miin Foong; Daniel Yoke San Lee; Wai Min Phyo; Igor Cima; Esther Xing Wei Lee; Wei Lin Goh; Wei-Yen Lim; Kee Seng Chia; Say Li Kong; Min Gong; Bing Lim; Axel M Hillmer; Poh Koon Koh; Jackie Y Ying; Min-Han Tan
Journal:  Mol Oncol       Date:  2015-01-07       Impact factor: 6.603

4.  Targeted next-generation sequencing of DNA regions proximal to a conserved GXGXXG signaling motif enables systematic discovery of tyrosine kinase fusions in cancer.

Authors:  Juliann Chmielecki; Martin Peifer; Peilin Jia; Nicholas D Socci; Katherine Hutchinson; Agnes Viale; Zhongming Zhao; Roman K Thomas; William Pao
Journal:  Nucleic Acids Res       Date:  2010-06-29       Impact factor: 16.971

5.  Epidermal growth factor receptor and Kras gene expression: reliability of mutational analysis on cytological samples.

Authors:  Cecilia Bozzetti; Francesca V Negri; Cinzia Azzoni; Nadia Naldi; Rita Nizzoli; Beatrice Bortesi; Valentina Zobbi; Lorena Bottarelli; Marcello Tiseo; Enrico Maria Silini; Andrea Ardizzoni
Journal:  Diagn Cytopathol       Date:  2012-07-26       Impact factor: 1.582

6.  Comparison of COBAS 4800 KRAS, TaqMan PCR and high resolution melting PCR assays for the detection of KRAS somatic mutations in formalin-fixed paraffin embedded colorectal carcinomas.

Authors:  Alexandre Harlé; Benoit Busser; Marie Rouyer; Valentin Harter; Pascal Genin; Agnès Leroux; Jean-Louis Merlin
Journal:  Virchows Arch       Date:  2013-02-12       Impact factor: 4.064

7.  Different metastatic pattern according to the KRAS mutational status and site-specific discordance of KRAS status in patients with colorectal cancer.

Authors:  Mi-Jung Kim; Hye Seung Lee; Jee Hyun Kim; Yu Jung Kim; Ji Hyun Kwon; Jeong-Ok Lee; Soo-Mee Bang; Kyoung Un Park; Duck-Woo Kim; Sung-Bum Kang; Jae-Sung Kim; Jong Seok Lee; Keun-Wook Lee
Journal:  BMC Cancer       Date:  2012-08-09       Impact factor: 4.430

8.  KRAS analysis in colorectal carcinoma: analytical aspects of Pyrosequencing and allele-specific PCR in clinical practice.

Authors:  Magnus Sundström; Karolina Edlund; Monica Lindell; Bengt Glimelius; Helgi Birgisson; Patrick Micke; Johan Botling
Journal:  BMC Cancer       Date:  2010-12-01       Impact factor: 4.430

9.  Clinical Validation of Targeted Next Generation Sequencing for Colon and Lung Cancers.

Authors:  Nicky D'Haene; Marie Le Mercier; Nancy De Nève; Oriane Blanchard; Mélanie Delaunoy; Hakim El Housni; Barbara Dessars; Pierre Heimann; Myriam Remmelink; Pieter Demetter; Sabine Tejpar; Isabelle Salmon
Journal:  PLoS One       Date:  2015-09-14       Impact factor: 3.240

10.  Validation of targeted next-generation sequencing for RAS mutation detection in FFPE colorectal cancer tissues: comparison with Sanger sequencing and ARMS-Scorpion real-time PCR.

Authors:  Jie Gao; Huanwen Wu; Li Wang; Hui Zhang; Huanli Duan; Junliang Lu; Zhiyong Liang
Journal:  BMJ Open       Date:  2016-01-08       Impact factor: 2.692

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  11 in total

1.  Clinical Evaluation of IntelliPlex™ KRAS G12/13 Mutation Kit for Detection of KRAS Mutations in Codon 12 and 13: A Novel Multiplex Approach.

Authors:  Chi-Long Chen; Chi-Kuan Chen; Chung-Liang Ho; Wei-Ming Chi; Chien-Hsuan Yeh; Shian-Pin Hu; Peter Friebe; Stuart Palmer; Chin-Shiou Huang
Journal:  Mol Diagn Ther       Date:  2019-10       Impact factor: 4.074

2.  Population-based Screening for BRAF V600E in Metastatic Colorectal Cancer Reveals Increased Prevalence and Poor Prognosis.

Authors:  Jenny E Chu; Benny Johnson; Laveniya Kugathasan; Van K Morris; Kanwal Raghav; Lucas Swanson; Howard J Lim; Daniel J Renouf; Sharlene Gill; Robert Wolber; Aly Karsan; Scott Kopetz; David F Schaeffer; Jonathan M Loree
Journal:  Clin Cancer Res       Date:  2020-06-22       Impact factor: 12.531

Review 3.  Current and emerging biomarkers in metastatic colorectal cancer.

Authors:  M K C Lee; J M Loree
Journal:  Curr Oncol       Date:  2019-11-01       Impact factor: 3.677

4.  Cationic copolymers that enhance wild-type-specific suppression in BNA-clamp PCR and preferentially increase the T m of fully matched complementary DNA and BNA strands.

Authors:  Ami Tachibana; Nahohiro Fujimura; Minoru Takeuchi; Koji Watanabe; Yoko Teruuchi; Tomoaki Uchiki
Journal:  Biol Methods Protoc       Date:  2022-03-30

5.  Report from the 20th annual Western Canadian Gastrointestinal Cancer Consensus Conference; Saskatoon, Saskatchewan; 28-29 September 2018.

Authors:  D M Le; S Ahmed; S Ahmed; B Brunet; J Davies; C Doll; M Ferguson; N Ginther; V Gordon; T Hamilton; P Hebbard; R Helewa; C A Kim; R Lee-Ying; H Lim; J M Loree; J P McGhie; K Mulder; J Park; D Renouf; R P W Wong; A Zaidi; T Asif
Journal:  Curr Oncol       Date:  2019-12-01       Impact factor: 3.677

6.  Molecular Landscape of ERBB2/ERBB3 Mutated Colorectal Cancer.

Authors:  Jonathan M Loree; Ann M Bailey; Amber M Johnson; Yao Yu; Wenhui Wu; Christopher A Bristow; Jennifer S Davis; Kenna R Shaw; Russell Broaddus; Kimberly C Banks; Richard B Lanman; Funda Meric-Bernstam; Michael J Overman; Scott Kopetz; Kanwal Raghav
Journal:  J Natl Cancer Inst       Date:  2018-12-01       Impact factor: 13.506

Review 7.  Recent developments in the treatment of metastatic colorectal cancer.

Authors:  Jonathan M Loree; Scott Kopetz
Journal:  Ther Adv Med Oncol       Date:  2017-06-29       Impact factor: 8.168

8.  Expanded Low Allele Frequency RAS and BRAF V600E Testing in Metastatic Colorectal Cancer as Predictive Biomarkers for Cetuximab in the Randomized CO.17 Trial.

Authors:  Jonathan M Loree; Anthony Dowers; Dongsheng Tu; Derek J Jonker; Daniel L Edelstein; Hannah Quinn; Frank Holtrup; Timothy Price; John R Zalcberg; Malcolm J Moore; Christos S Karapetis; Chris J O'Callaghan; Paul Waring; Hagen F Kennecke; Stanley R Hamilton; Scott Kopetz
Journal:  Clin Cancer Res       Date:  2020-10-21       Impact factor: 13.801

9.  Neoplastic cell percentage estimation in tissue samples for molecular oncology: recommendations from a modified Delphi study.

Authors:  Kelly Dufraing; J Henricus van Krieken; Gert De Hertogh; Gerald Hoefler; Anca Oniscu; Tine P Kuhlmann; Wilko Weichert; Caterina Marchiò; Ari Ristimäki; Aleš Ryška; Jean-Yves Scoazec; Elisabeth Dequeker
Journal:  Histopathology       Date:  2019-07-18       Impact factor: 5.087

Review 10.  The Prospect of Identifying Resistance Mechanisms for Castrate-Resistant Prostate Cancer Using Circulating Tumor Cells: Is Epithelial-to-Mesenchymal Transition a Key Player?

Authors:  Tanzila Khan; Kieran F Scott; Therese M Becker; John Lock; Mohammed Nimir; Yafeng Ma; Paul de Souza
Journal:  Prostate Cancer       Date:  2020-03-30
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