Literature DB >> 28273355

Evaluation of segmentation methods on head and neck CT: Auto-segmentation challenge 2015.

Patrik F Raudaschl1, Paolo Zaffino2, Gregory C Sharp3, Maria Francesca Spadea2, Antong Chen4, Benoit M Dawant5, Thomas Albrecht6, Tobias Gass6, Christoph Langguth7, Marcel Lüthi7, Florian Jung8, Oliver Knapp8, Stefan Wesarg8, Richard Mannion-Haworth9, Mike Bowes9, Annaliese Ashman9, Gwenael Guillard9, Alan Brett9, Graham Vincent9, Mauricio Orbes-Arteaga10, David Cárdenas-Peña10, German Castellanos-Dominguez10, Nava Aghdasi11, Yangming Li11, Angelique Berens11, Kris Moe11, Blake Hannaford11, Rainer Schubert1, Karl D Fritscher1.   

Abstract

PURPOSE: Automated delineation of structures and organs is a key step in medical imaging. However, due to the large number and diversity of structures and the large variety of segmentation algorithms, a consensus is lacking as to which automated segmentation method works best for certain applications. Segmentation challenges are a good approach for unbiased evaluation and comparison of segmentation algorithms.
METHODS: In this work, we describe and present the results of the Head and Neck Auto-Segmentation Challenge 2015, a satellite event at the Medical Image Computing and Computer Assisted Interventions (MICCAI) 2015 conference. Six teams participated in a challenge to segment nine structures in the head and neck region of CT images: brainstem, mandible, chiasm, bilateral optic nerves, bilateral parotid glands, and bilateral submandibular glands.
RESULTS: This paper presents the quantitative results of this challenge using multiple established error metrics and a well-defined ranking system. The strengths and weaknesses of the different auto-segmentation approaches are analyzed and discussed.
CONCLUSIONS: The Head and Neck Auto-Segmentation Challenge 2015 was a good opportunity to assess the current state-of-the-art in segmentation of organs at risk for radiotherapy treatment. Participating teams had the possibility to compare their approaches to other methods under unbiased and standardized circumstances. The results demonstrate a clear tendency toward more general purpose and fewer structure-specific segmentation algorithms.
© 2017 American Association of Physicists in Medicine.

Entities:  

Keywords:  atlas-based segmentation; automated segmentation; model-based segmentation; segmentation challenge

Mesh:

Year:  2017        PMID: 28273355     DOI: 10.1002/mp.12197

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  53 in total

Review 1.  Challenges in diffusion MRI tractography - Lessons learned from international benchmark competitions.

Authors:  Kurt G Schilling; Alessandro Daducci; Klaus Maier-Hein; Cyril Poupon; Jean-Christophe Houde; Vishwesh Nath; Adam W Anderson; Bennett A Landman; Maxime Descoteaux
Journal:  Magn Reson Imaging       Date:  2018-11-29       Impact factor: 2.546

2.  Multi-organ segmentation of the head and neck area: an efficient hierarchical neural networks approach.

Authors:  Elias Tappeiner; Samuel Pröll; Markus Hönig; Patrick F Raudaschl; Paolo Zaffino; Maria F Spadea; Gregory C Sharp; Rainer Schubert; Karl Fritscher
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-03-07       Impact factor: 2.924

3.  Efficient orbital structures segmentation with prior anatomical knowledge.

Authors:  Nava Aghdasi; Yangming Li; Angelique Berens; Richard A Harbison; Kris S Moe; Blake Hannaford
Journal:  J Med Imaging (Bellingham)       Date:  2017-07-22

4.  Automatic multiatlas based organ at risk segmentation in mice.

Authors:  Brent van der Heyden; Mark Podesta; Daniëlle Bp Eekers; Ana Vaniqui; Isabel P Almeida; Lotte Ejr Schyns; Stefan J van Hoof; Frank Verhaegen
Journal:  Br J Radiol       Date:  2018-07-25       Impact factor: 3.039

5.  Hierarchical model-based object localization for auto-contouring in head and neck radiation therapy planning.

Authors:  Yubing Tong; Jayaram K Udupa; Xingyu Wu; Dewey Odhner; Gargi Pednekar; Charles B Simone; David McLaughlin; Chavanon Apinorasethkul; Geraldine Shammo; Paul James; Joseph Camaratta; Drew A Torigian
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03-12

6.  Segmentation of parotid glands from registered CT and MR images.

Authors:  Domen Močnik; Bulat Ibragimov; Lei Xing; Primož Strojan; Boštjan Likar; Franjo Pernuš; Tomaž Vrtovec
Journal:  Phys Med       Date:  2018-06-19       Impact factor: 2.685

7.  Fully automatic multi-organ segmentation for head and neck cancer radiotherapy using shape representation model constrained fully convolutional neural networks.

Authors:  Nuo Tong; Shuiping Gou; Shuyuan Yang; Dan Ruan; Ke Sheng
Journal:  Med Phys       Date:  2018-09-19       Impact factor: 4.071

8.  A Deep Learning Model for Predicting Xerostomia Due to Radiation Therapy for Head and Neck Squamous Cell Carcinoma in the RTOG 0522 Clinical Trial.

Authors:  Kuo Men; Huaizhi Geng; Haoyu Zhong; Yong Fan; Alexander Lin; Ying Xiao
Journal:  Int J Radiat Oncol Biol Phys       Date:  2019-06-13       Impact factor: 7.038

9.  AAR-RT - A system for auto-contouring organs at risk on CT images for radiation therapy planning: Principles, design, and large-scale evaluation on head-and-neck and thoracic cancer cases.

Authors:  Xingyu Wu; Jayaram K Udupa; Yubing Tong; Dewey Odhner; Gargi V Pednekar; Charles B Simone; David McLaughlin; Chavanon Apinorasethkul; Ontida Apinorasethkul; John Lukens; Dimitris Mihailidis; Geraldine Shammo; Paul James; Akhil Tiwari; Lisa Wojtowicz; Joseph Camaratta; Drew A Torigian
Journal:  Med Image Anal       Date:  2019-01-29       Impact factor: 8.545

10.  PSIGAN: Joint Probabilistic Segmentation and Image Distribution Matching for Unpaired Cross-Modality Adaptation-Based MRI Segmentation.

Authors:  Jue Jiang; Yu-Chi Hu; Neelam Tyagi; Andreas Rimner; Nancy Lee; Joseph O Deasy; Sean Berry; Harini Veeraraghavan
Journal:  IEEE Trans Med Imaging       Date:  2020-11-30       Impact factor: 10.048

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