Literature DB >> 28265061

Amyotrophic lateral sclerosis-linked mutations increase the viscosity of liquid-like TDP-43 RNP granules in neurons.

Pallavi P Gopal1,2, Jeffrey J Nirschl2,3, Eva Klinman2,3, Erika L F Holzbaur4,3.   

Abstract

Ribonucleoprotein (RNP) granules are enriched in specific RNAs and RNA-binding proteins (RBPs) and mediate critical cellular processes. Purified RBPs form liquid droplets in vitro through liquid-liquid phase separation and liquid-like non-membrane-bound structures in cells. Mutations in the human RBPs TAR-DNA binding protein 43 (TDP-43) and RNA-binding protein FUS cause amyotrophic lateral sclerosis (ALS), but the biophysical properties of these proteins have not yet been studied in neurons. Here, we show that TDP-43 RNP granules in axons of rodent primary cortical neurons display liquid-like properties, including fusion with rapid relaxation to circular shape, shear stress-induced deformation, and rapid fluorescence recovery after photobleaching. RNP granules formed from wild-type TDP-43 show distinct biophysical properties depending on axonal location, suggesting maturation to a more stabilized structure is dependent on subcellular context, including local density and aging. Superresolution microscopy demonstrates that the stabilized population of TDP-43 RNP granules in the proximal axon is less circular and shows spiculated edges, whereas more distal granules are both more spherical and more dynamic. RNP granules formed by ALS-linked mutant TDP-43 are more viscous and exhibit disrupted transport dynamics. We propose these altered properties may confer toxic gain of function and reflect differential propensity for pathological transformation.

Entities:  

Keywords:  TDP-43; amyotrophic lateral sclerosis; liquid droplets; neurons; ribonucleoprotein granules

Mesh:

Substances:

Year:  2017        PMID: 28265061      PMCID: PMC5373408          DOI: 10.1073/pnas.1614462114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  58 in total

1.  A photoactivatable GFP for selective photolabeling of proteins and cells.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

Review 2.  Getting RNA and protein in phase.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

Review 3.  The cell as a material.

Authors:  Karen E Kasza; Amy C Rowat; Jiayu Liu; Thomas E Angelini; Clifford P Brangwynne; Gijsje H Koenderink; David A Weitz
Journal:  Curr Opin Cell Biol       Date:  2006-12-15       Impact factor: 8.382

4.  RNA transport and long-term memory storage.

Authors:  Sathyanarayanan V Puthanveettil
Journal:  RNA Biol       Date:  2013-12-10       Impact factor: 4.652

5.  ALS-linked mutations enlarge TDP-43-enriched neuronal RNA granules in the dendritic arbor.

Authors:  Liqun Liu-Yesucevitz; Amy Y Lin; Atsushi Ebata; Joon Y Boon; Whitney Reid; Ya-Fei Xu; Kendra Kobrin; George J Murphy; Leonard Petrucelli; Benjamin Wolozin
Journal:  J Neurosci       Date:  2014-03-19       Impact factor: 6.167

Review 6.  Liquid-liquid phase separation in biology.

Authors:  Anthony A Hyman; Christoph A Weber; Frank Jülicher
Journal:  Annu Rev Cell Dev Biol       Date:  2014       Impact factor: 13.827

7.  A Surveillance Function of the HSPB8-BAG3-HSP70 Chaperone Complex Ensures Stress Granule Integrity and Dynamism.

Authors:  Massimo Ganassi; Daniel Mateju; Ilaria Bigi; Laura Mediani; Ina Poser; Hyun O Lee; Samuel J Seguin; Federica F Morelli; Jonathan Vinet; Giuseppina Leo; Orietta Pansarasa; Cristina Cereda; Angelo Poletti; Simon Alberti; Serena Carra
Journal:  Mol Cell       Date:  2016-08-25       Impact factor: 17.970

8.  Optogenetic control of organelle transport using a photocaged chemical inducer of dimerization.

Authors:  Edward R Ballister; Swathi Ayloo; David M Chenoweth; Michael A Lampson; Erika L F Holzbaur
Journal:  Curr Biol       Date:  2015-05-18       Impact factor: 10.834

9.  Characterization and functional implications of the RNA binding properties of nuclear factor TDP-43, a novel splicing regulator of CFTR exon 9.

Authors:  E Buratti; F E Baralle
Journal:  J Biol Chem       Date:  2001-07-24       Impact factor: 5.157

10.  ALS/FTD Mutation-Induced Phase Transition of FUS Liquid Droplets and Reversible Hydrogels into Irreversible Hydrogels Impairs RNP Granule Function.

Authors:  Tetsuro Murakami; Seema Qamar; Julie Qiaojin Lin; Gabriele S Kaminski Schierle; Eric Rees; Akinori Miyashita; Ana R Costa; Roger B Dodd; Fiona T S Chan; Claire H Michel; Deborah Kronenberg-Versteeg; Yi Li; Seung-Pil Yang; Yosuke Wakutani; William Meadows; Rodylyn Rose Ferry; Liang Dong; Gian Gaetano Tartaglia; Giorgio Favrin; Wen-Lang Lin; Dennis W Dickson; Mei Zhen; David Ron; Gerold Schmitt-Ulms; Paul E Fraser; Neil A Shneider; Christine Holt; Michele Vendruscolo; Clemens F Kaminski; Peter St George-Hyslop
Journal:  Neuron       Date:  2015-10-29       Impact factor: 17.173

View more
  88 in total

Review 1.  Relation Between Stress Granules and Cytoplasmic Protein Aggregates Linked to Neurodegenerative Diseases.

Authors:  Ioana Dobra; Serhii Pankivskyi; Anastasiia Samsonova; David Pastre; Loic Hamon
Journal:  Curr Neurol Neurosci Rep       Date:  2018-11-08       Impact factor: 5.081

2.  Dysregulation of TDP-43 intracellular localization and early onset ALS are associated with a TARDBP S375G variant.

Authors:  Kathy Newell; Francesca Paron; Miguel Mompean; Jill Murrell; Elisa Salis; Cristiana Stuani; Gary Pattee; Maurizio Romano; Douglas Laurents; Bernardino Ghetti; Emanuele Buratti
Journal:  Brain Pathol       Date:  2018-12-27       Impact factor: 6.508

Review 3.  The molecular language of membraneless organelles.

Authors:  Edward Gomes; James Shorter
Journal:  J Biol Chem       Date:  2018-07-25       Impact factor: 5.157

Review 4.  Who's In and Who's Out-Compositional Control of Biomolecular Condensates.

Authors:  Jonathon A Ditlev; Lindsay B Case; Michael K Rosen
Journal:  J Mol Biol       Date:  2018-08-09       Impact factor: 5.469

5.  TAR DNA-binding protein 43 (TDP-43) liquid-liquid phase separation is mediated by just a few aromatic residues.

Authors:  Hao-Ru Li; Wan-Chin Chiang; Po-Chun Chou; Won-Jing Wang; Jie-Rong Huang
Journal:  J Biol Chem       Date:  2018-03-06       Impact factor: 5.157

Review 6.  The functional organization of axonal mRNA transport and translation.

Authors:  Irene Dalla Costa; Courtney N Buchanan; Matthew D Zdradzinski; Pabitra K Sahoo; Terika P Smith; Elizabeth Thames; Amar N Kar; Jeffery L Twiss
Journal:  Nat Rev Neurosci       Date:  2020-12-07       Impact factor: 34.870

Review 7.  mRNP assembly, axonal transport, and local translation in neurodegenerative diseases.

Authors:  Bilal Khalil; Dmytro Morderer; Phillip L Price; Feilin Liu; Wilfried Rossoll
Journal:  Brain Res       Date:  2018-02-17       Impact factor: 3.252

8.  Cytoplasmic TDP-43 De-mixing Independent of Stress Granules Drives Inhibition of Nuclear Import, Loss of Nuclear TDP-43, and Cell Death.

Authors:  Fatima Gasset-Rosa; Shan Lu; Haiyang Yu; Cong Chen; Ze'ev Melamed; Lin Guo; James Shorter; Sandrine Da Cruz; Don W Cleveland
Journal:  Neuron       Date:  2019-03-07       Impact factor: 17.173

9.  Quantifying Dynamics in Phase-Separated Condensates Using Fluorescence Recovery after Photobleaching.

Authors:  Nicole O Taylor; Ming-Tzo Wei; Howard A Stone; Clifford P Brangwynne
Journal:  Biophys J       Date:  2019-08-30       Impact factor: 4.033

10.  Inhibition of Axon Regeneration by Liquid-like TIAR-2 Granules.

Authors:  Matthew G Andrusiak; Panid Sharifnia; Xiaohui Lyu; Zhiping Wang; Andrea M Dickey; Zilu Wu; Andrew D Chisholm; Yishi Jin
Journal:  Neuron       Date:  2019-08-01       Impact factor: 17.173

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.