| Literature DB >> 28264508 |
Sandra Mejía1, Julio M Hernández-Pérez2, Jacinto Sandoval-Lira3, Fernando Sartillo-Piscil4.
Abstract
Recently, strong evidence that supports the presence of an intramolecular C-H···O hydrogen bond inEntities:
Keywords: C−H···O interaction; MP2; chiral lactams; α-methylbenzylamine
Mesh:
Substances:
Year: 2017 PMID: 28264508 PMCID: PMC6155423 DOI: 10.3390/molecules22030361
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Systems studied.
Figure 2The dihedral angle Φ is formed by atoms H(1), C(2), N(3), and C(4). (a) Closed, when Φ presents values near 0.0°; and (b) open, when Φ presents values near 180°.
Dihedral angles and relative energies of open and close conformer.
| Lactam | Φ, Open (°) | Φ, Closed (°) | ΔE (kcal/mol) |
|---|---|---|---|
| 166.71 | 33.415 | 1.20 | |
| 163.10 | 28.003 | 0.34 | |
| 156.24 | 20.410 | −2.19 | |
| 166.56 | 9.837 | −2.11 | |
| 156.39 | 8.575 | −4.04 | |
| 157.02 | 3.847 | −2.90 |
Figure 3Observed conformers of lactam 6, and their relative energies.
Geometrical parameters of closed structures.
| Lactam | O…H (Å) | C−H (Å) | C2...O (Å) | C−H...O (°) |
|---|---|---|---|---|
| 3.3600 | 1.1105 | 3.3501 | 79.97 | |
| 2.7605 | 1.1042 | 3.1269 | 98.85 | |
| 2.3449 | 1.1023 | 2.8585 | 106.37 | |
| 2.1785 | 1.0999 | 2.7425 | 109.07 | |
| 2.1933 | 1.1000 | 2.7655 | 109.71 | |
| 2.1390 | 1.0995 | 2.7340 | 111.09 |
C−H Distance and NBO analysis in closed conformers. The data for 4 open (4b) is used as reference.
| Lactam | C−Hα (Å) | s-Character % at C2 | Polarization of C−Hα Bond | Charge (u.a.) | Population σ*(C−Hα) | E(2) (kcal/mol) | ||
|---|---|---|---|---|---|---|---|---|
| % C | % H | at C | at Hα | |||||
| 1.1046 | 20.99 | 60.43 | 39.57 | 0.01615 | 0.20563 | 0.01615 | - | |
| 1.1042 | 22.05 | 62.010 | 37.990 | 0.01694 | 0.23853 | 0.01694 | 0.11 | |
| 1.1023 | 22.49 | 62.750 | 37.350 | 0.01781 | 0.25087 | 0.01781 | 0.75 | |
| 1.0999 | 22.87 | 63.390 | 36.610 | 0.01889 | 0.26308 | 0.01889 | 1.26 | |
| 1.1000 | 22.75 | 63.190 | 36.810 | 0.01826 | 0.25905 | 0.01826 | 1.29 | |
| 1.0995 | 22.76 | 63.440 | 36.560 | 0.01888 | 0.26374 | 0.01888 | 1.60 | |
Figure 4(a) Correlation of population of charges for H and C in the C−Hα bond with the C−Hα distance (charge of H in blue and for C in red); (b) NBO plots illustrate the overlap of the n(o) orbital and the σ*(C−Hα) orbital in the conformer 4a.
Calculated frequencies of the fundamental C−Hα stretching, and their corresponding relative infrared shifts (%RIS).
| Lactam | Conformers a | Conformers b | |
|---|---|---|---|
| ν (cm−1) | ν (cm−1) | %RIS | |
| 3105.26 | 3074.69 | 0.99 | |
| 3123.34 | 3074.32 | 1.59 | |
| 3145.59 | 3078.07 | 2.19 | |
| 3145.03 | 3078.42 | 2.16 | |
| 3147.57 | 3074.81 | 2.37 |
Figure 5Correlation of %RIS for C−H bond with C2···O distance donor–acceptor. %RIS = 813.64Exp(−2.153*distance), R2 = 0.9806.
Values of electron density and Laplacian of electron density in the C−Hα···O bond critical point.
| Lactam | ρ (BCP) | ∇2ρ(r) (BCP) |
|---|---|---|
| 0.0226 | 0.0843 | |
| 0.0219 | 0.0816 | |
| 0.0241 | 0.0870 |