| Literature DB >> 28259893 |
Ming-Li Zhu1, Cui-Yue Wang2, Cheng-Mian Xu1, Wei-Ping Bi1, Xiu-Ying ZHou3.
Abstract
BACKGROUNDEntities:
Mesh:
Substances:
Year: 2017 PMID: 28259893 PMCID: PMC5349244 DOI: 10.12659/msm.899646
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Figure 1ATP binding site showing hydrophobic region, sugar pocket, adenine region, and hydrophobic region.
Figure 2Reported anticancer compounds and designed benzothiazole derivatives showing bioisosteric replacement.
Figure 3The crystal structure of EGFR kinase domain (pdb code 1XKK) in complex with lapatinib.
Docking analysis of compounds.
| Sr. No. | Compound | Amino acid | Bond | Binding energy | Inhibitory constant (uM) | Inter molecular energy | Electrostatic energy |
|---|---|---|---|---|---|---|---|
| 1 | LEPATINIB | LYS806, ILE938, Gly–512 | HO, HH, NH | −10.26 | 125.89 | −10.54 | −3.5 |
| − | − | − | |||||
| 3 | BT2 | LYS806; LYS806 | HN; HN | −5.94 | 44.42 | −7.13 | −0.22 |
| 4 | BT3 | LYS806 | HH | −5.31 | 128.27 | −6.5 | 0.09 |
| − | − | − | |||||
| 6 | BT5 | LYS806 | – | −5.35 | 119.49 | −6.54 | −0.08 |
| 7 | BT6 | LYS806 | – | −5.72 | 63.69 | −6.92 | −0.05 |
| 8 | BT7 | LYS806 | HN | −4.88 | 265.76 | −6.07 | −0.09 |
| − | − | − | |||||
| 10 | BT9 | ARG803 | HO | −5.87 | 49.59 | −7.07 | −0.18 |
| 11 | BT10 | LYS806; LYS806 | HO; HN | −5.62 | 76.57 | −7.11 | −0.25 |
| 12 | BT11 | LYS806 | – | −5.65 | 72.3 | −7.14 | −0.15 |
| 13 | BT12 | LYS806 | HO | −5.66 | 70.71 | −6.86 | −0.1 |
| 14 | BT13 | – | – | −5.38 | 113.31 | −6.58 | 0.03 |
| 15 | BT14 | – | – | −5.47 | 98.3 | −6.66 | 0.01 |
| 16 | BT15 | LYS806 | HN | −5.43 | 104.74 | −6.62 | −0.09 |
| − | − | − | |||||
| − | − | − | |||||
| − | − | ||||||
| 20 | BT19 | LYS806 | HO | −5.94 | 44.1 | −7.73 | −0.86 |
The bolded compounds show good binding and were used for synthetic studies.
Figure 4Docking interaction of Compound BT-1 with 1XKK. Dashed line represents H bonds.
Figure 5Docking interaction of compound BT-4 with 1XKK. Dashed line represents H bonds.
Figure 6Docking interaction of compound BT-16 with 1XKK. Dashed line represents H bonds.
Figure 7Docking interaction of compound BT-17 with 1XKK. Dashed line represents H bonds.
Figure 8Docking interaction of compound BT-18 with 1XKK. Dashed line represents H bonds.
Figure 9Docking interaction of Lepatinib with 1XKK. D dashed line represents H bonds.
Results for anticancer evaluation at concentration 10−5 M.
| Compound No. | Subpanel tumor cell lines colon cancer | Active (selected for 5-dose 60 cell lines assay) | ||
|---|---|---|---|---|
| Assay of cell lines in 1-dose 10−5 M | ||||
| HCT-116 | HCT-15 | HT29 | ||
| BT1 | 12.36 | 10.3 | 2.9 | Active |
| BT4 | 11.41 | 9.43 | 3.0 | Active |
| BT8 | 2.46 | 11.32 | 4.5 | Active |
| BT16 | 11.46 | 0.43 | 0.23 | Inactive |
| BT17 | 15.67 | 4.23 | 6.7 | Active |
| BT18 | 7.12 | 11.10 | 14.47 | Active |
| Lapatinib | 22.31 | 27.23 | 36.12 | – |
Dose-dependent assay for anticancer evaluation.
| Compound No. | N | LogGI50 | Log TGI | Log LC50 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| N1 | Range | MG_MID | N2 | Range | MG_MID | N3 | Range | MG_MID | ||
| BT1 | 3 | 3 | −4.64 to −6.49 | −5.07 | 56 | −4.0 to −4.83 | −4.4 | 19 | −4.0 to −4.36 | −4.06 |
| BT4 | 3 | 3 | −4.64 to −6.52 | −5.33 | 37 | −4.0 to 5.08 | −4.36 | 09 | −4.0 to −4.28 | −4.02 |
| BT8 | 3 | 3 | −4.0 to −4.84 | −4.45 | 08 | −4.0 to −4.24 | −4.02 | 00 | −4.0 to −4.02 | −4.0 |
| BT17 | 3 | 3 | −4.42 to −5.02 | −4.71 | 25 | −4.0 to −4.32 | −4.07 | 03 | −4.0 to −4.08 | −4.0 |
| BT18 | 3 | 3 | −3.92 to −6.93 | −4.90 | 49 | −3.92 to −6.01 | −4.07 | 49 | −3.92 to −4.75 | −4.29 |
N – no. of human cancer cell lines tested at the IInd stage assay;
N1, N2, N3 – no. of sensitive cell lines, against which the compound possessed considerable growth inhibition as per the standard parameter (logGI50, logTGI, and log LC50 ≥4.00) (GI50 (50% of net cell growth inhibition at molar concentration of the compound.) TGI (Total inhibition at molar concentration of the compound) and LC50 (50% of net cell death at molar concentration of the compound).
The sensitivity pattern of synthesized compounds.
| Compd. No. | Cancer type | Most sensitive cell line | Log GI50 | LOG TGI | Log LC50 |
|---|---|---|---|---|---|
| BT1 | Colon cancer | HCT-116 | −5.31 | −4.64 | >−4.00 |
| HC-29 | −5.19 | −4.49 | >−4.00 | ||
| BT-4 | Colon cancer | HCT116 | −5.59 | −4.70 | >−4.00 |
| HCT15 | −5.71 | −5.28 | −4.27 | ||
| HC29 | −6.52 | −4.42 | >−4.00 | ||
| BT-8 | Colon cancer | HCT116 | −6.01 | >−4.00 | >−4.00 |
| HCT15 | −5.59 | −4.70 | >−4.00 | ||
| HC29 | −5.71 | −5.28 | −4.27 | ||
| BT-16 | Colon cancer | HCT116 | −5.59 | −4.70 | >−4.00 |
| HCT15 | −5.71 | −5.28 | −4.27 | ||
| HC29 | −5.58 | −5.07 | −4.06 | ||
| BT-17 | Colon cancer | HCT116 | −5.59 | −4.70 | >−4.00 |
| HCT15 | −5.71 | −5.28 | −4.27 | ||
| HC29 | −5.58 | −5.07 | −4.06 |