Literature DB >> 28254941

DNA Fountain enables a robust and efficient storage architecture.

Yaniv Erlich1,2,3, Dina Zielinski4.   

Abstract

DNA is an attractive medium to store digital information. Here we report a storage strategy, called DNA Fountain, that is highly robust and approaches the information capacity per nucleotide. Using our approach, we stored a full computer operating system, movie, and other files with a total of 2.14 × 106 bytes in DNA oligonucleotides and perfectly retrieved the information from a sequencing coverage equivalent to a single tile of Illumina sequencing. We also tested a process that can allow 2.18 × 1015 retrievals using the original DNA sample and were able to perfectly decode the data. Finally, we explored the limit of our architecture in terms of bytes per molecule and obtained a perfect retrieval from a density of 215 petabytes per gram of DNA, orders of magnitude higher than previous reports.
Copyright © 2017, American Association for the Advancement of Science.

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Year:  2017        PMID: 28254941     DOI: 10.1126/science.aaj2038

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  71 in total

Review 1.  Carbon-based archiving: current progress and future prospects of DNA-based data storage.

Authors:  Zhi Ping; Dongzhao Ma; Xiaoluo Huang; Shihong Chen; Longying Liu; Fei Guo; Sha Joe Zhu; Yue Shen
Journal:  Gigascience       Date:  2019-06-01       Impact factor: 6.524

Review 2.  DNA-based memory devices for recording cellular events.

Authors:  Ravi U Sheth; Harris H Wang
Journal:  Nat Rev Genet       Date:  2018-11       Impact factor: 53.242

3.  An archive written in DNA.

Authors:  Reinhard Heckel
Journal:  Nat Biotechnol       Date:  2018-03-06       Impact factor: 54.908

4.  Random access in large-scale DNA data storage.

Authors:  Lee Organick; Siena Dumas Ang; Yuan-Jyue Chen; Randolph Lopez; Sergey Yekhanin; Konstantin Makarychev; Miklos Z Racz; Govinda Kamath; Parikshit Gopalan; Bichlien Nguyen; Christopher N Takahashi; Sharon Newman; Hsing-Yeh Parker; Cyrus Rashtchian; Kendall Stewart; Gagan Gupta; Robert Carlson; John Mulligan; Douglas Carmean; Georg Seelig; Luis Ceze; Karin Strauss
Journal:  Nat Biotechnol       Date:  2018-02-19       Impact factor: 54.908

Review 5.  DNA as a digital information storage device: hope or hype?

Authors:  Darshan Panda; Kutubuddin Ali Molla; Mirza Jainul Baig; Alaka Swain; Deeptirekha Behera; Manaswini Dash
Journal:  3 Biotech       Date:  2018-05-04       Impact factor: 2.406

6.  A high storage density strategy for digital information based on synthetic DNA.

Authors:  Shufang Zhang; Beibei Huang; Xiangming Song; Tao Zhang; Hanjie Wang; Yuhong Liu
Journal:  3 Biotech       Date:  2019-08-24       Impact factor: 2.406

7.  Encrypted Oligonucleotide Arrays for Molecular Authentication.

Authors:  Matthew T Holden; Lloyd M Smith
Journal:  ACS Comb Sci       Date:  2019-07-15       Impact factor: 3.784

8.  Bioinspired MXene-integrated colloidal crystal arrays for multichannel bioinformation coding.

Authors:  Feika Bian; Lingyu Sun; Lijun Cai; Yu Wang; Yuanjin Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

9.  Correlation between polar surface area and bioferroelectricity in DNA and RNA nucleobases.

Authors:  See-Chuan Yam; Sharifuddin Md Zain; Vannajan Sanghiran Lee; Khian-Hooi Chew
Journal:  Eur Phys J E Soft Matter       Date:  2018-07-18       Impact factor: 1.890

10.  An Intelligent Optimization Algorithm for Constructing a DNA Storage Code: NOL-HHO.

Authors:  Qiang Yin; Ben Cao; Xue Li; Bin Wang; Qiang Zhang; Xiaopeng Wei
Journal:  Int J Mol Sci       Date:  2020-03-22       Impact factor: 5.923

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