Literature DB >> 28237511

Coupling genetic code expansion and metabolic engineering for synthetic cells.

Jan-Stefan Völler1, Nediljko Budisa2.   

Abstract

Orthogonal protein translation with noncanonical amino acids (ncAAs) has become a standard method in biosciences. Whereas much effort is made to broaden the chemical space of ncAAs, only few attempts on their systematic low-cost in situ production are reported until now. The main aim is to engineer cells with newly designed biosynthetic pathways coupled with orthogonal aminoacyl-tRNA synthetase/tRNA pairs (o-pairs). These should provide cost-effective solutions to industrially relevant bio-production problems, such as peptide/protein production beyond the canonical set of natural molecules and to expand the arsenal of chemistries available for living cells. Therefore, coupling genetic code expansion (GCE) with metabolic engineering is the basic prerequisite to transform orthogonal translation from a standard technique in academic research to industrial biotechnology.
Copyright © 2017. Published by Elsevier Ltd.

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Year:  2017        PMID: 28237511     DOI: 10.1016/j.copbio.2017.02.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  13 in total

1.  Tuning the Properties of Protein-Based Polymers Using High-Performance Orthogonal Translation Systems for the Incorporation of Aromatic Non-Canonical Amino Acids.

Authors:  Osher Gueta; Ortal Sheinenzon; Rotem Azulay; Hadas Shalit; Daniela S Strugach; Dagan Hadar; Sigal Gelkop; Anat Milo; Miriam Amiram
Journal:  Front Bioeng Biotechnol       Date:  2022-05-30

Review 2.  Nisin Variants Generated by Protein Engineering and Their Properties.

Authors:  Yue Zheng; Yuhui Du; Zekai Qiu; Ziming Liu; Jianjun Qiao; Yanni Li; Qinggele Caiyin
Journal:  Bioengineering (Basel)       Date:  2022-06-10

3.  Esterification of Polymeric Carbohydrate Through Congener Cutinase-Like Biocatalyst.

Authors:  Valappil Sisila; Puhazhendi Puhazhselvan; Mayilvahanan Aarthy; Girimanikandan Sakkeeshyaa; Perisamy Saravanan; Numbi Ramudu Kamini; Niraikulam Ayyadurai
Journal:  Appl Biochem Biotechnol       Date:  2020-08-18       Impact factor: 2.926

4.  Engineering posttranslational proofreading to discriminate nonstandard amino acids.

Authors:  Aditya M Kunjapur; Devon A Stork; Erkin Kuru; Oscar Vargas-Rodriguez; Matthieu Landon; Dieter Söll; George M Church
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-04       Impact factor: 11.205

Review 5.  Efforts and Challenges in Engineering the Genetic Code.

Authors:  Xiao Lin; Allen Chi Shing Yu; Ting Fung Chan
Journal:  Life (Basel)       Date:  2017-03-14

6.  Expanding the Genetic Code of Lactococcus lactis and Escherichia coli to Incorporate Non-canonical Amino Acids for Production of Modified Lantibiotics.

Authors:  Maike Bartholomae; Tobias Baumann; Jessica H Nickling; David Peterhoff; Ralf Wagner; Nediljko Budisa; Oscar P Kuipers
Journal:  Front Microbiol       Date:  2018-04-06       Impact factor: 5.640

7.  In-Cell Synthesis of Bioorthogonal Alkene Tag S-Allyl-Homocysteine and Its Coupling with Reprogrammed Translation.

Authors:  Saba Nojoumi; Ying Ma; Sergej Schwagerus; Christian P R Hackenberger; Nediljko Budisa
Journal:  Int J Mol Sci       Date:  2019-05-09       Impact factor: 5.923

8.  Expanding the limits of the second genetic code with ribozymes.

Authors:  Joongoo Lee; Kenneth E Schwieter; Andrew M Watkins; Do Soon Kim; Hao Yu; Kevin J Schwarz; Jongdoo Lim; Jaime Coronado; Michelle Byrom; Eric V Anslyn; Andrew D Ellington; Jeffrey S Moore; Michael C Jewett
Journal:  Nat Commun       Date:  2019-11-08       Impact factor: 14.919

9.  Engineering 'Golden' Fluorescence by Selective Pressure Incorporation of Non-canonical Amino Acids and Protein Analysis by Mass Spectrometry and Fluorescence.

Authors:  Tobias Baumann; Franz-Josef Schmitt; Almut Pelzer; Vivian Jeanette Spiering; Georg Johannes Freiherr von Sass; Thomas Friedrich; Nediljko Budisa
Journal:  J Vis Exp       Date:  2018-04-27       Impact factor: 1.355

10.  An Engineered Escherichia coli Strain with Synthetic Metabolism for in-Cell Production of Translationally Active Methionine Derivatives.

Authors:  Christian Johannes Schipp; Ying Ma; Ammar Al-Shameri; Federico D'Alessio; Peter Neubauer; Roberto Contestabile; Nediljko Budisa; Martino Luigi di Salvo
Journal:  Chembiochem       Date:  2020-10-13       Impact factor: 3.164

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