Literature DB >> 28233994

Structures and Properties of As(OH)3 Adsorption Complexes on Hydrated Mackinawite (FeS) Surfaces: A DFT-D2 Study.

Nelson Y Dzade1, Alberto Roldan2, Nora H de Leeuw1,2.   

Abstract

Reactive mineral-water interfaces exert control on the bioavailability of contaminant arsenic species in natural aqueous systems. However, the ability to accurately predict As surface complexation is limited by the lack of molecular-level understanding of As-water-mineral interactions. In the present study, we report the structures and properties of the adsorption complexes of arsenous acid (As(OH)3) on hydrated mackinawite (FeS) surfaces, obtained from density functional theory (DFT) calculations. The fundamental aspects of the adsorption, including the registries of the adsorption complexes, adsorption energies, and structural parameters are presented. The FeS surfaces are shown to be stabilized by hydration, as is perhaps to be expected because the adsorbed water molecules stabilize the low-coordinated surface atoms. As(OH)3 adsorbs weakly at the water-FeS(001) interface through a network of hydrogen-bonded interactions with water molecules on the surface, with the lowest-energy structure calculated to be an As-up outer-sphere complex. Compared to the water-FeS(001) interface, stronger adsorption was calculated for As(OH)3 on the water-FeS(011) and water-FeS(111) interfaces, characterized by strong hybridization between the S-p and O-p states of As(OH)3 and the surface Fe-d states. The As(OH)3 molecule displayed a variety of chemisorption geometries on the water-FeS(011) and water-FeS(111) interfaces, where the most stable configuration at the water-FeS(011) interface is a bidentate Fe-AsO-Fe complex, but on the water-FeS(111) interface, a monodentate Fe-O-Fe complex was found. Detailed information regarding the adsorption mechanisms has been obtained via projected density of states (PDOS) and electron density difference iso-surface analyses and vibrational frequency assignments of the adsorbed As(OH)3 molecule.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28233994      PMCID: PMC5362745          DOI: 10.1021/acs.est.7b00107

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


Introduction

Arsenic is recognized as one of the most serious inorganic contaminants in soil and groundwater worldwide, with significant public health implications. Arsenic often makes its way into soil and water courses by the natural processes of weathering and dissolution of minerals such as arsenian pyrite, Fe(As,S)2, and arsenopyrite, FeAsS.[1] Anthropogenic activities, particularly mineral extraction and processing can also introduce arsenic-rich effluents into the environment if not carefully monitored and controlled.[2] The effects of arsenic on human health are highly detrimental, with arsenic poisoning being linked to neurological disorders, dermatological and gastrointestinal problems, and it is also a known carcinogen.[3,4] Arsenic can exist in a range of oxidation states from −3 to +5, although in aqueous solutions it is most commonly found as As(III) or As(V) oxyacids. As(III) is both more toxic (20–65 times) and more mobile (being able to travel five to six times faster) than As(V) and is one of the main toxic species in natural waters.[5−7] Analyses of hydrothermal fluids show that As is transported mainly as As(III),[8] and the uptake of As(III) from aqueous solutions is reported to occur via neutral molecules, which suggest that arsenous acid (As(OH)3) or related species could be the common form of arsenic in contaminated waters.[9,10] An understanding of the geochemistry of As(OH)3 in low temperature anoxic sedimentary environments is therefore crucial to the development of safe drinking water and food supplies in many countries.[11,12] Of the processes influencing arsenite mobility, reactive mineral–water interfaces exert control on the bioavailability of contaminant arsenic species in natural aqueous systems. The adsorption of arsenic species onto mineral surfaces strongly affects their concentrations in aqueous environments.[13] In recent years, iron sulfide mackinawite (FeS), has attracted significant interests for environmental remediation due to its natural abundance and high treatment efficiency in anoxic environments.[14−26] FeS is a layered iron sulfide mineral that crystallizes in the tetragonal structure shown in Figure ,[27,28] and it is known to be the first crystalline ferrous sulfide phase to form under sulfate reducing conditions.[29,30] FeS is a nontoxic mineral and a precursor to other stable iron sulfide minerals, such as greigite and pyrite.[29,30] Like other 2D layered materials, for example, MoS2, FeS possesses a high specific surface area and reactive surfaces that are ideal for the uptake of aqueous contaminants. Furthermore, FeS nanoparticles can be synthesized easily,[31−35] which makes it a promising candidate for the treatment of groundwater and soil contaminated with arsenic,[14−18] selenium,[19,20] and heavy metals, including mercury,[21−23] and chromium.[24−26]
Figure 1

Layered structure of mackinawite, with the tetragonal unit cell highlighted by dash lines. (Color scheme: Fe = gray, S = yellow).

Layered structure of mackinawite, with the tetragonal unit cell highlighted by dash lines. (Color scheme: Fe = gray, S = yellow). Owing to its unique structure and surface chemical properties, mackinawite has been reported to be very effective in immobilizing divalent metals such as Mg2+, Ca2+, Mn2+, Ni2+, Cd2+, and Hg2+ from aqueous solutions.[36−39] FeS has also been shown to have a high removal capacity for inorganic oxyanions, including As under anoxic conditions.[14−20] It has been reported that mackinawite suspensions and synthetic nanoparticulate mackinawite can effectively remove As(III) at a pH range of 5–10.[14,40] A comparative study of the removal capacity of As(III) and As(V) in aqueous solutions by goethite, lepidocrocite, mackinawite, and pyrite, by Farquhar et al.[17] has shown that mackinawite was more efficient than iron-oxide phases or pyrite. Their results suggested that the arsenic uptake by freshly prepared mackinawite was due to outer-sphere complexation,[17] but fundamental aspects of this process, including the registries of the adsorption complexes, adsorption energies, and structural parameters remain unclear. Such information cannot be obtained directly from experimental work and the underlying physical driving forces that control the reactivity of arsenic species with the FeS surfaces remain poorly understood. The diverse interactions and reactions occurring at the mineral–water interfaces often create complex situations that are difficult to interpret. However, molecular simulations provide an alternative way to gain fundamental insight into these processes.[41−44] Calculations based on the density functional theory (DFT) have become indispensable in unravelling the interactions of organic and inorganic molecules with solid surfaces as they are capable of accurately predicting lowest-energy adsorption geometries and identifying charge transfer and other electronic effects.[45−47] For example, DFT-based studies have been instrumental in elucidating the complex adsorption processes of arsenic and arsenate on iron oxide mineral surfaces.[42,43] Goffinet and Mason employed spin-polarized DFT calculations to study the inner-sphere As(III) complexes on hydrated α-Fe2O3(0001) surface models.[42] Blanchard and co-workers have modeled arsenate adsorption on the hydrated (10–12) hematite surface, investigating charged inner- and outer-sphere complexes using DFT calculations.[43] To date, no systematic theoretical study has been conducted to investigate the detailed adsorption mechanism of arsenous acid at the waterFeS interface, which makes this investigation timely. In this study, the structures and properties of the adsorption complexes of As(OH)3 on hydrated mackinawite (FeS) surfaces were studied using dispersion-corrected density functional theory calculations (DFT-D2). The energetically preferred As(OH)3 surface complexes on the hydrated (001), (011), and (111) surfaces of mackinawite have been identified. Detailed structural analysis of the adsorption complexes and insight into the nature of adsorption on the different surfaces was determined via analysis of projected density of states and differential charge density iso-surfaces. Vibrational frequency assignment of the different identified adsorption complexes of As(OH)3 was carried out, which will be useful for comparison with any future experimental studies.

Computational Details

The calculations were carried out using the VASP code,[48,49] which employs a basis set of plane-waves to solve the Kohn–Sham (KS) equations of the density functional theory (DFT) in a periodic system. Long-range dispersion forces were accounted for in our calculations using the Grimme DFT-D2 method,[50] which is essential for the accurate description of the FeS interlayer interactions,[51−54] as well as the interactions between the As(OH)3 molecule and the waterFeS surfaces. The D2 method was used in this study to remain consistent with previous work and to ensure that direct comparison could be made with our earlier studies. However, we have carried out a number of test calculations using the DFT-D3 method, as mentioned in the text where relevant, but no significant differences between the two methods were observed. The generalized gradient approximation (GGA), with the PW91 functional[55] was used to calculate the total free energies. The interactions between the valence electrons and the cores were described with the projected augmented wave (PAW) method[56] in the implementation of Kresse and Joubert.[57] The on-site potential, GGA+U, was not employed for these calculations as previous studies on FeS using VASP have shown that the extra localization of the d-electrons through the inclusion of a +U correction term provides inadequate structural optimizations.[54] An energy cutoff of 400 eV for the plane-wave basis set was tested to be sufficient to converge the total energy of mackinawite to within 0.0001 eV and the Brillouin zone was sampled using 11 × 11 × 7 and 5 × 5 × 1 Monkhorst–Pack[58] K-points mesh for bulk and surface calculations, respectively, which ensures electronic and ionic convergence. Geometry optimizations were performed using the conjugate gradient minimization algorithm until the magnitude of the residual Hellman–Feynman force on each relaxed atom reached 0.001 eV/Å. The bulk FeS was modeled in the tetragonal structure (Figure ). From a full geometry optimization, the equilibrium lattice parameters were predicted to be a = 3.587 Å, c = 4.908 Å, and c/a = 1.368,[44,51−54] which agree well with those measured experimentally (a = 3.674 Å, c = 5.033 Å, and c/a = 1.370).[27,28] Similar results were obtained within the DFT-D3 scheme, which predicted the lattice parameters to be a = 3.590 Å, c = 4.992 Å, and c/a = 1.390. From the fully relaxed bulk structure, we created the (001), (011), and (111) surfaces of FeS, which are the commonly observed facets in mackinawite nanoparticles.[44,59] The surfaces were created using the METADISE code,[60] which generates nonpolar supercells, avoiding dipole moments perpendicular to the surface plane, as is required for reliable and realistic surface calculations.[61] For each surface, a minimum slab thicknesses of 10 Å was used in each simulation cell, and a vacuum region of 15 Å was tested to be sufficient to avoid interactions between periodic slabs. The converged slab thickness used to model the (001), (011), and (111) surfaces were constructed of 6, 9, and 12 atomic layers, respectively. Because the processes take place in an aqueous environment, the FeS surfaces were hydrated through associative adsorption of a monolayer of water, to provide a realistic picture of the As(OH)3 complexation in natural aqueous systems at the mackinawitewater interface. In an earlier study, we showed that dissociative water adsorption did not occur spontaneously at FeS surfaces.[62] We considered that a monolayer of water was obtained when all surface cations/anions had been terminated by water. The hydrated (001), (011), and (111) surfaces are modeled by large slabs constructed as (3 × 3)–9water, (4 × 2)–8water, and (3 × 2)–6water supercells, respectively. These simulation supercells are large enough to minimize lateral interaction between the As(OH)3 molecules in neighboring image cells. Different binding modes of the As(OH)3 molecule were considered, for example, monodentate or bidentate adsorption configurations, in order to obtain the lowest-energy adsorption complexes. The adsorption energy (Eads) of the As(OH)3 on the hydrated FeS surfaces was calculated as follows:where Ewater–surf+As(OH) represents the total energy of the adsorbate–substrate system, Ewater–surf represents the total energy of the relevant hydrated FeS substrate, and EAs(OH) is the energy of the free As(OH)3 molecule. Differences in the adsorption energies reflect trends in surface reactivity, thus Eads is useful for characterizing activity trends and relative energetics. A Bader population analysis was carried out for all the As(OH)3waterFeS complexes, using the code developed by Henkelman and co-workers[63] in order to quantify any charge transfer between the substrate surfaces and the adsorbate molecule. Vibrational frequency assignment of the As–O and O–H bond stretching modes was performed within the framework of the self-consistent density functional perturbation theory.[64]

Results and Discussion

Hydrated FeS (001), (011), and (111) Surface Models

Prior to studying the adsorption and surface reactions of As(OH)3, we have characterized the interaction of water with the (001), (011), and (111) surfaces of FeS and how hydration affects their relative stabilities. Shown in Figure are the optimized structures of the hydrated (001), (011), and (111) surfaces. The relaxed surface energies (γ) of the pure symmetric stoichiometric slabs were calculated using the equation:where Eslabrelaxed and Eslabunrelaxed are the energies of the relaxed and unrelaxed slabs, respectively, nEbulk is the energy of an equal number (n) of bulk FeS units, and A is the area of one side of the slab. Considering that the adsorption of water on the FeS surfaces may affect their stability, we have also calculated the surface energies of the surfaces after water adsorption using eqs .where Eslab + waterrelaxed is the energy of the surface with adsorbed water molecules and nEwater is the energy of an equivalent number of free water molecules.
Figure 2

Side view of the geometry-optimized structures of hydrated FeS (a) (001), (b) (011), and (111) surfaces. (Color scheme: Fe = gray, S = yellow, O = red, and H = white).

Side view of the geometry-optimized structures of hydrated FeS (a) (001), (b) (011), and (111) surfaces. (Color scheme: Fe = gray, S = yellow, O = red, and H = white). The calculated surface energies of different surfaces (pristine and hydrated) as listed in Table , show that the order of increasing surface energies, and therefore decreasing stability, before and after hydration is (001) < (011) < (111). All the FeS surfaces were stabilized through hydration, as is perhaps to be expected because the adsorbed water molecules stabilize the low-coordinated surface atoms. At the FeS(001) surface, we found that the water molecules were only physisorbed with the hydrogen atoms pointing toward the terminating surface sulfur ions (Figure a), similar to results obtained from previous DFT,[53,62] and molecular dynamics (MD) simulations[65] of the structure and dynamics of water at the FeS(001) surface. The shortest H–S distance is calculated at 2.319 Å, which is larger than the typical hydrogen-bond length in water of 1.97 Å,[66] and therefore suggests that dispersion forces may play an important role in stabilizing the water molecule on the FeS(001) surface. In a previous study, we showed that the dispersion interactions contribute approximately 87% of the total adsorption energy of water on the FeS(001).[62] The average hydrogen to oxygen (H---O) interatomic distance between the water molecules on the (001) surface is calculated at 1.824 Å.
Table 1

Calculated Surface Energies of Pristine (γr) and Hydrated (γhydrated) FeSa

surfaceγr (J m–2)γhydrated (J m–2)% relaxation
(001)0.190.1426.31
(011)0.950.7125.26
(111)1.511.2119.87

The corresponding percentage relaxation after hydration is denoted as % relaxation.

The corresponding percentage relaxation after hydration is denoted as % relaxation. Compared to the (001) surface, the water molecules on the (011) surface are oriented in such a way that now the O atoms are closest to the surface Fe sites (average Fe–O = 2.253 Å) as shown in Figure b. The hydrogen atoms are oriented toward the sulfur ions in the next FeS layer at an average distance of 2.703 Å, which is larger than the average Fe–O bond length of 2.253 Å and therefore suggests that the major interactions between the adsorbing water molecules and the (011) surface is through the interaction of their oxygen ions with surface Fe ions. In the case of the waterFeS(111) complex (Figure c), the water molecules are located above the bridge sites between adjacent Fe ions (average Fe–O = 2.205 Å). The hydrogen atoms are oriented toward the sulfur ions in the next FeS layer at an average distance of 2.043 Å, compared to 2.703 Å at the FeS(011) surface, which indicates stronger hydrogen-bonding at the FeS(111) surface than at the FeS(011). Generally, the FeS surfaces were found to undergo modest relaxations relative to the bulk interlayer spacings upon hydration, where the topmost three percentage relaxations of the interlayer spacings are calculated to be +6.5%, + 3.3%, and −3.4% for the (001), – 24.1%, + 10.9%, and −2.3% for the (011), and +29.3%, + 12.1%, and −6.6% for the (111). The multilayer relaxations for the hydrated surfaces were calculated as the percentage difference in the surface interlayer spacing, dij-hydrated, from the layer spacing of the same orientation in the geometry of the unrelaxed surface structure, dij-unrelaxed, created from the equilibrium bulk material. In these simulations, since the models are constructed from the optimized bulk structure, the required surface layer spacing is given by the spacing of the unrelaxed bulk-terminated slab structure. Within this definition, negative values correspond to inward relaxation (contraction) and positive values denote outward relaxation (dilation) of the interlayer spacings.

As(OH)3 Structural Conformations

Arsenous acid (As(OH)3) exists in two conformations in the gas phase with either C1 or C symmetry. The optimized geometries of the C1 and C3 conformations are shown in Figure and the calculated interatomic bond distances and bond angles along with earlier theoretical results[41,67] are listed in Table . From our geometry optimization calculations, we found that the C1 symmetry is 0.03 eV more stable than the C symmetry, in agreement with earlier theoretical results of Ramírez-Solís et al.[67] and Tossell et al.[68] We show from climbing-image nudged elastic band (cNEB) calculations that the C1 conformation has to overcome an activation barrier of 0.34 eV to transform to the higher-energy C3 conformation. The three As–O bond distances of the C1 and the C3 conformers do not differ significantly, calculated to be 1.798, 1.801, and 1.811 Å for the C1 symmetry and 1.810, 1.811, and 1.813 Å for the C symmetry. Our calculated bond distances (As–O and O–H) and angles (O–As–O and As–O–H) show good agreement with earlier theoretical results[41,67,68] and with those obtained from X-ray absorption and EXAFS analysis.[69,70] In our study, we have explored several possible adsorption structures including monodentate or bidentate binding geometries on the different hydrated FeS surfaces.
Figure 3

Optimized structures and energetics of C1 and C3 conformations of As(OH)3. (Color scheme: As = green, O = red and H = white).

Table 2

Structural Data (Interatomic Bond Distance and Angles) of As(OH)3, the experimental As–O bond length is 1.77–1.82 Å[69,70]

 C1 symmetry
C3 symmetry
parameterthis workPBE[41]B3LYP[67]this workPBE[41]B3LYP[67]
d(As–O) /Å1.7981.8111.7961.8101.8291.813
 1.8011.8181.8001.8111.8291.813
 1.8111.8411.8261.8131.8291.813
 
d(O–H) /Å0.9750.9770.9670.9750.9820.970
 0.9780.9800.9690.9780.9820.970
 0.9780.9830.9700.9780.9820.970
 
α(O–As–O) /°90.1788.7990.8697.2596.9297.34
 99.8499.7599.6197.4896.9497.36
 100.94103.22100.8997.5796.9997.37
 
α(As–O–H) /°108.6105.33110.16108.6104.87109.93
 110.9109.83112.68110.8104.98109.94
 111.2111.77112.78111.0105.02109.93
Optimized structures and energetics of C1 and C3 conformations of As(OH)3. (Color scheme: As = green, O = red and H = white).

As(OH)3 Adsorption Complexes at Water–FeS(001) Interface

Several possible modes of adsorption sites and configurations were studied for As(OH)3 adsorption at the water-FeS(001) interfaces but only the lowest-energy structure (denoted As–up–outer) is shown in Figure a (the remaining conformations and calculated binding energies are given in the Supporting Information (SI) Figure S1 and Table S1, respectively). In the lowest-energy As–up–outer complex, the As(OH)3 is adsorbed outside the water layer with the As atom pointing upward, while the hydroxyl groups form hydrogen-bonded interactions with the surface-bound water molecules. The adsorption energy of this structure is −1.14 eV, which is 0.2 eV more favorable than the As–up inner-sphere complex (SI Figure S1b), in which the As(OH)3 molecule is adsorbed within the water layer by displacing some of the water molecules during the adsorption process. In the case of As–down configurations, the inner-sphere complex (SI Figure S1c) is found to be energetically more favorable than the outer-sphere complex (SI Figure S1d) by 0.23 eV. In all adsorption geometries, we observe only small elongations in the As–O and O–H bonds (Table and SI Table S1) compared to the structural data of the free As(OH)3 molecule (Table ), which may be attributed to the hydrogen-bonded interactions with the surface water molecules. In the lowest-energy outer-sphere As–up complex, the three hydrogen atoms of the As(OH)3 molecule interact with three different surface water molecules at Hmol–Owat distances of 1.702, 1.747, and 1.960 Å. We also observe hydrogen-bonded interactions between hydrogen atoms of two water molecules and O atoms of As(OH)3 at Hwat–Omol distances of 1.639 and 1.783 Å. The Hmol–Owat and Hwat–Omol bond lengths calculated in the present study compare closely with the typical hydrogen-bond length in water of 1.97 Å,[66] which therefore suggests that hydrogen-bonded interactions contribute significantly to the stabilization of As(OH)3 at the waterFeS(001) interface.
Figure 4

Lowest-energy adsorption complexes of As(OH)3 at the (a) (001), (b) (011), and (c) (111) water–FeS interfaces, in side (top) and top (bottom) views. (Color scheme: Fe = grey, S = yellow, As = green, Owater = red, OAs(III) = pink, and H = white).

Table 3

Adsorption Energies, Variation of the Total Bader Charge, Representative Geometrical Parameters, And Interatomic Distances of the Lowest-Energy As(OH)3 Adsorption Complexes at Water–FeS (001), (011), and (111) Interfaces (the DFT-D3 Eads are shown in parentheses)

surfaceFeS(001)FeS(011)FeS(111)
configurationAs–up–outerFe–AsO–FeFe–O–Fe
Eads /eV–1.14 (−1.06)–1.82 (−1.73)–1.76 (−1.68)
∑q/e0.040.300.28
d(As–O) /Å1.8341.8891.946
 1.8351.8381.810
 1.7811.8771.765
d(O–H) /Å0.9881.0241.018
 1.0030.9771.004
 1.0050.9800.977
d(Hmol–Owat) /Å1.702, 1.747, 1.9601.6451.817
d(Hwat–Omol) /Å1.639, 1.7831.8033.240
d(Hwat–S) /Å2.301 2.034
d(As–S) /Å 3.3823.675
d(As–Fe) /Å 2.2693.365
d(O–Fe) /Å 2.1332.149
Lowest-energy adsorption complexes of As(OH)3 at the (a) (001), (b) (011), and (c) (111) waterFeS interfaces, in side (top) and top (bottom) views. (Color scheme: Fe = grey, S = yellow, As = green, Owater = red, OAs(III) = pink, and H = white).

As(OH)3 Adsorption Complexes at Water-FeS(011) Interface

As with the waterFeS(001) surface, we have considered different possible adsorption structures for As(OH)3 on the waterFeS(011) surface. During the adsorption, some of the water molecules were displaced from the surface by the As(OH)3, enabling direct stronger interactions with the surface cations sites. Shown in Figure b is the lowest-energy adsorption configuration identified (the remaining conformations are given in the SI Figure S2, whereas the calculated adsorption energies and optimized structural parameters are reported in Table and SI Table S2. The lowest-energy adsorption structure of As(OH)3 at the waterFeS(011) interface is calculated to be a bidentate FeAsO–Fe complex (Figure b), wherein the As(OH)3 molecule interacts with the surface Fe atoms via the As and one O atom. The adsorption energy of this structure is calculated at −1.82 eV, compared to the adsorption energy of −1.43 eV for the monodentate Fe–O complex (SI Figure S2b), wherein the As(OH)3 molecule interacts with the surface Fe atoms via only one O atom, – 1.06 eV for the monodentate FeAs complex (SI Figure S2c), wherein the As(OH)3 molecule interacts with the surface Fe atoms via the As atom, and −0.89 eV for the As–bridge complex (SI Figure S2d), wherein the As(OH)3 is adsorbed in a bridging position between the FeS layers and stabilized through hydrogen-bonded interactions with the surface water molecules. The As–S interatomic distances are calculated in the range of 2.960–4.147 Å, whereas the AsFe are calculated in the range of 2.269–3.787 Å (Table and SI Table S2). Similar interatomic distances were reported from spectroscopic and extended X-ray absorption fine structure (EXAFS) data fitting of As(III) sorbed on mackinawite (As–S = 3.1 Å and AsFe = 3.4–3.5 Å) in aqueous solution.[17]

As(OH)3 Adsorption Complexes at Water-FeS(111) Interface

Again, we have explored several possible sites and modes of adsorption of As(OH)3 on the waterFeS(111) surface. Similar to the waterFeS(011) surface, some of the water molecules were displaced by As(OH)3 during the adsorption process, which allows for the formation of direct interactions with the surface cation sites. Displayed in Figure c is the lowest-energy adsorption complex identified (the remaining conformations are given in the SI Figure S3).The lowest-energy As(OH)3 adsorption configuration at the waterFeS(111) interface was calculated to be the Fe–O–Fe complex (Figure c), wherein the As(OH)3 molecule adsorbs at the bridge site between adjacent surface Fe atoms via one O atom. The adsorption energy of this structure (Fe–O–Fe complex) is calculated at −1.76 eV, whereas the energies of the other stable adsorption configurations are calculated at −1.57 eV for the FeAsO–Fe complex (SI Figure S3b), – 1.17 eV for the FeAs complex (SI Figure S3c), and −0.86 eV for the Hwat–OH–Ssurf complex (SI Figure S3d). In the lowest-energy Fe–O–Fe complex, the bridging O–Fe distances were calculated at 2.159 and 2.138 Å, and the average values are reported in Table . The As–S and AsFe interatomic distances are converged at 3.675 and 3.365 Å, respectively. Similar interatomic distances were calculated for the As atom interacting with the surface S and Fe ions in the other adsorption configurations (SI Table S3). At all three waterFeS interfaces, we have observed elongations in the As–O bonds in all adsorption complexes (1.765–1.946 Å), especially in the complexes in which the O atom interacts directly with the surface Fe ions. O–H bond elongations were also observed (0.976–1.046 Å), which can be attributed to the presence of hydrogen-bonded interactions between the hydrogen atom of As(OH)3 and the O atom of the surface water molecules as reported in Table and SI Tables S1–S3.

Electronic Structures

To gain insight into the nature of the interactions between the As(OH)3 molecule and the different hydrated FeS surfaces, we have carried out an atom-by-atom projected density of states (PDOS) analysis of the free molecule and compared it to those of the adsorbed states. The PDOS for the free As(OH)3 molecule is shown in Figure a1, whereas those for the lowest-energy adsorption configurations at the waterFeS (001), (011), and (111) interfaces are shown in Figures b1, c1, and d1, respectively. In the free As(OH)3 PDOS, we note that the states around the Fermi level are dominated by p-states of As and O, which are associated with the lone pair electron density of the As and O atoms as shown in the highest occupied molecular orbital (HOMO) in Figure a2. These orbitals are therefore expected to interact strongly with the orbitals of the surface species during sorption processes at the mineral surfaces. Indeed, we found that at the waterFeS (011) and (111) interfaces where the As(OH)3 interacts directly with the surface Fe ions, we observe disappearance or reduction of the As-p and O-p states of As(OH)3 around the Fermi level, due to their strong hybridization with the interacting surface Fe-d states (Figures c1 and d1). At the waterFeS(001) interface, however, we only observe a shift toward lower energy levels (Figure b1), which signifies stabilization of the As(OH)3 via physisorption. The PDOS for the interacting surface Fe-d-states before and after the adsorption of As(OH)3 at the waterFeS(111) and waterFeS(011) interface, and for the interacting surface S-p-states at the waterFeS(001) interface are shown in Figure . We found that the electronic properties of the surfaces were essentially preserved after the adsorption of As(OH)3, with only small shifts in the peak positions and heights, which indicates adsorption induced changes due to the interactions between the As(OH)3 species and the waterFeS interfaces. The electron density redistributions within the adsorbate–substrate systems were determined through analyses of the iso-surface plots of the differential charge density, which is obtained by subtracting from the charge density of the total adsorbate–substrate complex, the sum of the charge densities of the As(OH)3 molecule and the hydrated FeS surface. The atomic positions of the waterFeS surface and of the As(OH)3 molecule are kept the same as those of the total adsorbate–substrate system. In this way, the presentation highlights local electron density rearrangement and bond formation in the As(OH)3waterFeS complexes. Shown in Figures b2, c2, and d2 are the isosurfaces of the electron density differences due to As(OH)3 adsorption at the waterFeS (001), (011), and (111) interfaces, respectively. An inspection of the iso-surfaces reveals electron density accumulation within the bonding regions between As(OH)3 and the waterFeS (011) and (111) interacting surface Fe ions, which is consistent with the formation of new bonds. In the case of the As(OH)3waterFeS (001) complex, we see electron density accumulation between the hydrogen and O atoms indicative of hydrogen-bonded interactions. Despite the strong electron density redistribution within the As(OH)3waterFeS complexes, only little charge transfer occurs from the interacting surface species to the adsorbed As(OH)3 molecule, as revealed from our Bader charge population analyses (Tables and SI Tables S1–S3). The charge gained by the As(OH)3 in the different adsorption complexes is calculated to be in the range of 0.01–0.04 e– at the waterFeS(001) surface, 0.08–0.30 e– at the waterFeS(011) surface, and 0.01–0.28 e– at the waterFeS(111) surface (Tables and SI Tables S1–S3).
Figure 5

(Right) PDOS for As(OH)3 in the (a) free state and adsorbed in the lowest-energy geometry at the water–FeS interfaces (b–d). (Left) the corresponding isosurfaces of the differential charge density, where the purple and orange contours indicate electron density increase and decrease by 0.02 e/Å3, respectively.

Figure 6

PDOS for the interacting surface Fe d-states before and after the adsorption of As(OH)3 at the (a) water–FeS(111) and (b) water–FeS(011) interface, and (c) for the interacting surface S-p-states at the water–FeS(001) interface.

(Right) PDOS for As(OH)3 in the (a) free state and adsorbed in the lowest-energy geometry at the waterFeS interfaces (b–d). (Left) the corresponding isosurfaces of the differential charge density, where the purple and orange contours indicate electron density increase and decrease by 0.02 e/Å3, respectively. PDOS for the interacting surface Fe d-states before and after the adsorption of As(OH)3 at the (a) waterFeS(111) and (b) waterFeS(011) interface, and (c) for the interacting surface S-p-states at the waterFeS(001) interface.

Vibrational Properties

In order to propose an assignment for the As–O and O–H stretching vibrational modes of the adsorbed As(OH)3, which can serve as a guide for future experimental identification of the different adsorption complexes of As(OH)3 at the waterFeS interfaces, we have computed the wavenumbers of the normal modes of all the stable adsorption complexes at the different waterFeS interfaces (Table and SI Table S4). Our calculated As–O and O–H stretching vibrational modes for the free As(OH)3 molecule compare closely with experimental data,[71] as shown in Table , which ensures the reliability and accuracy of our approximate assignments. The three As–O stretching vibrational modes for the free As(OH)3 molecule were calculated at 700.8, 639.1, and 638.3, which compares with the experimental values of 710.0, 655.0, and 655.0 cm–1.[71] The O–H stretching vibrational modes are calculated at 3743.5, 3715.3, and 3674.6 cm–1 which are similar to the O–H stretching modes of water.[72] Compared to the free As(OH)3 molecule, we observe a reduction in the stretching vibrational modes of the As–O bonds upon As(OH)3 adsorption, indicative of weakening of these bonds, in agreement with the elongated As–O bonds calculated for the As(OH)3 adsorption complexes at the different waterFeS surfaces (Table ). For example, the three stretching As–O bands of As(OH)3 adsorbed in the lowest-energy configuration at the waterFeS(011) and waterFeS(111) surfaces can be assigned at 580.2, 501.5, 488.9 cm–1 and 673.5, 616.5, 456.1 cm–1, respectively, which are lower than the gas phase stretching As–O band assigned at 700.8, 639.1, and 632.3 cm–1. We have also observed reductions in the stretching O–H bands of the adsorbed As(OH)3 compared to the free unbound state (Table ), which can be attributed to the formations of hydrogen-bonded interactions with the oxygen ions of the surface water molecules.
Table 4

Molecular Vibrational Frequencies (in cm–1) of Adsorbed As(OH)3 at Water–FeS Interfaces

  ν(As–O)
ν(O–H)
surfaceconfigurationAs–O1As–O2As–O3O1–HO2–HO2–H
 free As(OH)3700.8 (710)[71]639.1 (655)[71]638.3 (655)[71]3738.13711.53674.7
FeS(001)As–up–outer695.1620.7585.83465.93182.93140.5
FeS(011)Fe–AsO–Fe580.2501.5488.93715.13670.92829.1
FeS(111)Fe–O–Fe673.5616.5456.13731.23204.22884.3
The unique information provided by our atomic-level investigations provide fundamental insights into the structure–property relationships of FeSwaterAs(OH)3 interfaces. Our simulations show that As(OH)3 adsorbs weakly onto the waterFeS(001) interface through a network of hydrogen-bond interactions with water molecules at the surface. Stronger interaction is, however, calculated for As(OH)3 adsorption on the waterFeS(011) and waterFeS (111) interfaces, which is characterized by hybridization between the S-p and O-p states of As(OH)3 and the surface Fe-d states. Our calculated AsFe and As–S interatomic distances in the lowest-energy adsorption complexes at the various water-mackinawite interfaces (AsFe = 2.269–3.369 Å and As–S = 3.382–3.675 Å) show good agreement with those obtained from K-edge EXAFS and XANES spectroscopic data (AsFe = 3.4–3.5 Å and As–S = 3.1 Å).[17] The long distances obtained from experiment clearly suggest As interactions via outer sphere complexes at the FeS surface. However, from our simulation results, the short AsFe distances (2.217–2.530 Å) calculated for the FeAsO–Fe and FeAs adsorption complexes at the water-FeS (011) and (111) interfaces indicate that, depending on the surface structure and composition, inner-sphere complexation with respect to the As atom is also possible at the water-mackinawite interface. Future investigations will expand the work presented here to include classical MD simulations which will provide a complete description of the dynamic processes occurring at the As(OH)3waterFeS interfaces. The calculated interatomic distances and adsorption energies from this work will be useful in the derivation of force fields to be employed in the classical MD simulations to simulate more complex systems, including single and multiple As(OH)3 species adsorption from an explicit 3-dimensional aqueous environment.
  32 in total

1.  Atoms, molecules, solids, and surfaces: Applications of the generalized gradient approximation for exchange and correlation.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1992-09-15

2.  Experimental and theoretical characterization of arsenite in water: insights into the coordination environment of As-O.

Authors:  Alejandro Ramírez-Solís; Rita Mukopadhyay; Barry P Rosen; Timothy L Stemmler
Journal:  Inorg Chem       Date:  2004-05-03       Impact factor: 5.165

3.  A new nonsymmetric as (OH)3 species. Comparison with the known C3 species and themochemistry at the HF, DFT(B3LYP), MP2, MP4, and CCSD(T) levels of theory.

Authors:  Alejandro Ramírez-Solís; Jorge Hernandez-Cobos; Cristina Vargas
Journal:  J Phys Chem A       Date:  2006-06-22       Impact factor: 2.781

4.  Projector augmented-wave method.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1994-12-15

5.  Structure and dynamics of water at the mackinawite (001) surface.

Authors:  Umberto Terranova; Nora H de Leeuw
Journal:  J Chem Phys       Date:  2016-03-07       Impact factor: 3.488

6.  Comparative DFT study of inner-sphere As(III) complexes on hydrated α-Fe2O3(0001) surface models.

Authors:  Christoffer J Goffinet; Sara E Mason
Journal:  J Environ Monit       Date:  2012-06-20

7.  Immobilization of aqueous Hg(II) by mackinawite (FeS).

Authors:  Jianrong Liu; Kalliat T Valsaraj; Istvan Devai; R D DeLaune
Journal:  J Hazard Mater       Date:  2008-01-11       Impact factor: 10.588

Review 8.  Arsenic toxicity and potential mechanisms of action.

Authors:  Michael F Hughes
Journal:  Toxicol Lett       Date:  2002-07-07       Impact factor: 4.372

9.  XANES-EXAFS analysis of se solid-phase reaction products formed upon contacting Se(IV) with FeS2 and FeS.

Authors:  E Breynaert; C Bruggeman; A Maes
Journal:  Environ Sci Technol       Date:  2008-05-15       Impact factor: 9.028

10.  The surface chemistry of NO(x) on mackinawite (FeS) surfaces: a DFT-D2 study.

Authors:  N Y Dzade; A Roldan; N H de Leeuw
Journal:  Phys Chem Chem Phys       Date:  2014-08-07       Impact factor: 3.676

View more
  2 in total

Review 1.  Reactivity of CO2 on the surfaces of magnetite (Fe3O4), greigite (Fe3S4) and mackinawite (FeS).

Authors:  David Santos-Carballal; Alberto Roldan; Nelson Y Dzade; Nora H de Leeuw
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2018-01-13       Impact factor: 4.226

2.  Adsorption and Desulfurization Mechanism of Thiophene on Layered FeS(001), (011), and (111) Surfaces: A Dispersion-Corrected Density Functional Theory Study.

Authors:  Nelson Y Dzade; Nora H de Leeuw
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2017-11-28       Impact factor: 4.126

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.