Literature DB >> 28232884

Can proteins be intrinsically disordered inside a membrane?

Magnus Kjaergaard1.   

Abstract

Intrinsically disorder has evolved in many soluble proteins because it confers a unique set of functional advantages. In contrast, the functions of membrane proteins are largely understood in terms of well-defined structures. This raises the question: Why would the evolutionary pressures that select for disorder leave membrane proteins untouched. In this hypothesis piece, I argue that intrinsic disorder may exist in membrane embedded proteins, but that it will take a different form due to the different environment. Disordered membrane proteins are thus likely to have fully formed secondary structure, but little tertiary structure. Furthermore, the sequence signature for disorder in membrane proteins is likely to be reversed; so disordered proteins are more hydrophobic than their folded counterparts. At present it is impossible to tell how common this type of disordered membrane protein is.

Entities:  

Keywords:  Intrinsic disorder; binding promiscuity; hydrophobicity; membrane protein; sequence signature

Year:  2015        PMID: 28232884      PMCID: PMC5314916          DOI: 10.4161/21690707.2014.984570

Source DB:  PubMed          Journal:  Intrinsically Disord Proteins        ISSN: 2169-0707


  44 in total

1.  Polar side chains drive the association of model transmembrane peptides.

Authors:  H Gratkowski; J D Lear; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

Review 2.  Membrane protein folding and stability: physical principles.

Authors:  S H White; W C Wimley
Journal:  Annu Rev Biophys Biomol Struct       Date:  1999

3.  Why are "natively unfolded" proteins unstructured under physiologic conditions?

Authors:  V N Uversky; J R Gillespie; A L Fink
Journal:  Proteins       Date:  2000-11-15

Review 4.  Natively unfolded proteins: a point where biology waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

Review 5.  Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm.

Authors:  P E Wright; H J Dyson
Journal:  J Mol Biol       Date:  1999-10-22       Impact factor: 5.469

6.  Evolutionary rate heterogeneity in proteins with long disordered regions.

Authors:  Celeste J Brown; Sachiko Takayama; Andrew M Campen; Pam Vise; Thomas W Marshall; Christopher J Oldfield; Christopher J Williams; A Keith Dunker
Journal:  J Mol Evol       Date:  2002-07       Impact factor: 2.395

Review 7.  Signals for sorting of transmembrane proteins to endosomes and lysosomes.

Authors:  Juan S Bonifacino; Linton M Traub
Journal:  Annu Rev Biochem       Date:  2003-03-06       Impact factor: 23.643

8.  Polar residues drive association of polyleucine transmembrane helices.

Authors:  F X Zhou; H J Merianos; A T Brunger; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

9.  Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

Authors:  A Senes; M Gerstein; D M Engelman
Journal:  J Mol Biol       Date:  2000-02-25       Impact factor: 5.469

10.  Intrinsic protein disorder in complete genomes.

Authors:  A K Dunker; Z Obradovic; P Romero; E C Garner; C J Brown
Journal:  Genome Inform Ser Workshop Genome Inform       Date:  2000
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  4 in total

Review 1.  Dancing Protein Clouds: The Strange Biology and Chaotic Physics of Intrinsically Disordered Proteins.

Authors:  Vladimir N Uversky
Journal:  J Biol Chem       Date:  2016-02-05       Impact factor: 5.157

Review 2.  Functions of intrinsic disorder in transmembrane proteins.

Authors:  Magnus Kjaergaard; Birthe B Kragelund
Journal:  Cell Mol Life Sci       Date:  2017-06-10       Impact factor: 9.261

Review 3.  Insights into Membrane Curvature Sensing and Membrane Remodeling by Intrinsically Disordered Proteins and Protein Regions.

Authors:  Chandra Has; P Sivadas; Sovan Lal Das
Journal:  J Membr Biol       Date:  2022-04-22       Impact factor: 2.426

4.  Assessing the Expression of Aquaporin 3 Antigen-Recognition Sites in Oral Squamous Cell Carcinoma.

Authors:  Chatchaphan Udompatanakorn; Naomi Yada; Kou Matsuo
Journal:  Appl Immunohistochem Mol Morphol       Date:  2020-09
  4 in total

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