Literature DB >> 28221004

Systems biology of oxygen homeostasis.

Debangshu Samanta1,2, Nanduri R Prabhakar3,4, Gregg L Semenza1,2,5,6,7,8,9.   

Abstract

Metazoan species maintain oxygen homeostasis through the activity of hypoxia-inducible factors, which are transcriptional activators that regulate the expression of hundreds of genes to match O2 supply and demand. Here, we review the involvement of hypoxia-inducible factors in the molecular physiology and pathophysiology of cellular O2 sensing, O2 delivery, O2 utilization, and systemic O2 sensing. WIREs Syst Biol Med 2017, 9:e1382. doi: 10.1002/wsbm.1382 For further resources related to this article, please visit the WIREs website.
© 2017 Wiley Periodicals, Inc.

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Year:  2017        PMID： 28221004      PMCID： PMC5606335          DOI： 10.1002/wsbm.1382

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN： 1939-005X


  81 in total

1.  Protein kinase G-regulated production of H2S governs oxygen sensing.

Authors:  Guoxiang Yuan; Chirag Vasavda; Ying-Jie Peng; Vladislav V Makarenko; Gayatri Raghuraman; Jayasri Nanduri; Moataz M Gadalla; Gregg L Semenza; Ganesh K Kumar; Solomon H Snyder; Nanduri R Prabhakar
Journal:  Sci Signal       Date:  2015-04-21       Impact factor: 8.192

2.  Disruption of oxygen homeostasis underlies congenital Chuvash polycythemia.

Authors:  Sonny O Ang; Hua Chen; Kiichi Hirota; Victor R Gordeuk; Jaroslav Jelinek; Yongli Guan; Enli Liu; Adelina I Sergueeva; Galina Y Miasnikova; David Mole; Patrick H Maxwell; David W Stockton; Gregg L Semenza; Josef T Prchal
Journal:  Nat Genet       Date:  2002-11-04       Impact factor: 38.330

3.  The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis.

Authors:  P H Maxwell; M S Wiesener; G W Chang; S C Clifford; E C Vaux; M E Cockman; C C Wykoff; C W Pugh; E R Maher; P J Ratcliffe
Journal:  Nature       Date:  1999-05-20       Impact factor: 49.962

Review 4.  Oxygen homeostasis.

Authors:  Gregg L Semenza
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010 May-Jun

5.  Metabolic reprogramming by HIF-1 promotes the survival of bone marrow-derived angiogenic cells in ischemic tissue.

Authors:  Sergio Rey; Weibo Luo; Larissa A Shimoda; Gregg L Semenza
Journal:  Blood       Date:  2011-03-09       Impact factor: 22.113

6.  The oxygen sensor factor-inhibiting hypoxia-inducible factor-1 controls expression of distinct genes through the bifunctional transcriptional character of hypoxia-inducible factor-1alpha.

Authors:  Frédéric Dayan; Danièle Roux; M Christiane Brahimi-Horn; Jacques Pouyssegur; Nathalie M Mazure
Journal:  Cancer Res       Date:  2006-04-01       Impact factor: 12.701

7.  Effects of aging and hypoxia-inducible factor-1 activity on angiogenic cell mobilization and recovery of perfusion after limb ischemia.

Authors:  Marta Bosch-Marce; Hiroaki Okuyama; Jacob B Wesley; Kakali Sarkar; Hideo Kimura; Ye V Liu; Huafeng Zhang; Marianne Strazza; Sergio Rey; Lindsey Savino; Yi Fu Zhou; Karin R McDonald; Youn Na; Scott Vandiver; Alireza Rabi; Yuval Shaked; Robert Kerbel; Theresa Lavallee; Gregg L Semenza
Journal:  Circ Res       Date:  2007-10-11       Impact factor: 17.367

8.  Vascular endothelial growth factor in ocular fluid of patients with diabetic retinopathy and other retinal disorders.

Authors:  L P Aiello; R L Avery; P G Arrigg; B A Keyt; H D Jampel; S T Shah; L R Pasquale; H Thieme; M A Iwamoto; J E Park
Journal:  N Engl J Med       Date:  1994-12-01       Impact factor: 91.245

9.  Hypoxia-inducible factor 2α (HIF-2α) heterozygous-null mice exhibit exaggerated carotid body sensitivity to hypoxia, breathing instability, and hypertension.

Authors:  Ying-Jie Peng; Jayasri Nanduri; Shakil A Khan; Guoxiang Yuan; Ning Wang; Brian Kinsman; Damodara R Vaddi; Ganesh K Kumar; Joseph A Garcia; Gregg L Semenza; Nanduri R Prabhakar
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-31       Impact factor: 12.779

10.  Quantitative flux analysis reveals folate-dependent NADPH production.

Authors:  Jing Fan; Jiangbin Ye; Jurre J Kamphorst; Tomer Shlomi; Craig B Thompson; Joshua D Rabinowitz
Journal:  Nature       Date:  2014-05-04       Impact factor: 49.962
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  13 in total

1.  Physiological Genomics of Adaptation to High-Altitude Hypoxia.

Authors:  Jay F Storz; Zachary A Cheviron
Journal:  Annu Rev Anim Biosci       Date:  2020-11-23       Impact factor: 8.923

Review 2.  High-Altitude Erythrocytosis: Mechanisms of Adaptive and Maladaptive Responses.

Authors:  Francisco C Villafuerte; Tatum S Simonson; Daniela Bermudez; Fabiola León-Velarde
Journal:  Physiology (Bethesda)       Date:  2022-01-10

3.  Decreased lymphatic HIF-2α accentuates lymphatic remodeling in lymphedema.

Authors:  Xinguo Jiang; Wen Tian; Eric J Granucci; Allen B Tu; Dongeon Kim; Petra Dahms; Shravani Pasupneti; Gongyong Peng; Yesl Kim; Amber H Lim; F Hernan Espinoza; Matthew Cribb; J Brandon Dixon; Stanley G Rockson; Gregg L Semenza; Mark R Nicolls
Journal:  J Clin Invest       Date:  2020-10-01       Impact factor: 14.808

4.  Aberrant hydroxymethylation of ANGPTL4 is associated with selective intrauterine growth restriction in monochorionic twin pregnancies.

Authors:  Yi Zhang; Dezhong Zheng; Qun Fang; Mei Zhong
Journal:  Epigenetics       Date:  2020-03-05       Impact factor: 4.528

Review 5.  Genetically Encoded Tools for Research of Cell Signaling and Metabolism under Brain Hypoxia.

Authors:  Alexander I Kostyuk; Aleksandra D Kokova; Oleg V Podgorny; Ilya V Kelmanson; Elena S Fetisova; Vsevolod V Belousov; Dmitry S Bilan
Journal:  Antioxidants (Basel)       Date:  2020-06-11

6.  Serine and 1-carbon metabolism are required for HIF-mediated protection against retinopathy of prematurity.

Authors:  Charandeep Singh; George Hoppe; Vincent Tran; Leah McCollum; Youstina Bolok; Weilin Song; Amit Sharma; Henri Brunengraber; Jonathan E Sears
Journal:  JCI Insight       Date:  2019-07-25

7.  High-Altitude Adaptation: Mechanistic Insights from Integrated Genomics and Physiology.

Authors:  Jay F Storz
Journal:  Mol Biol Evol       Date:  2021-06-25       Impact factor: 16.240

Review 8.  Hypoxia in CNS Pathologies: Emerging Role of miRNA-Based Neurotherapeutics and Yoga Based Alternative Therapies.

Authors:  Gillipsie Minhas; Deepali Mathur; Balakrishnan Ragavendrasamy; Neel K Sharma; Viraaj Paanu; Akshay Anand
Journal:  Front Neurosci       Date:  2017-07-11       Impact factor: 4.677

Review 9.  Hypoxia and the phenomenon of immune exclusion.

Authors:  Violena Pietrobon; Francesco M Marincola
Journal:  J Transl Med       Date:  2021-01-06       Impact factor: 5.531

Review 10.  The VHL/HIF Axis in the Development and Treatment of Pheochromocytoma/Paraganglioma.

Authors:  Song Peng; Jun Zhang; Xintao Tan; Yiqiang Huang; Jing Xu; Natalie Silk; Dianzheng Zhang; Qiuli Liu; Jun Jiang
Journal:  Front Endocrinol (Lausanne)       Date:  2020-11-24       Impact factor: 5.555
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