Literature DB >> 28216659

The β-barrel assembly machinery in motion.

Nicholas Noinaj1, James C Gumbart2, Susan K Buchanan3.   

Abstract

In Gram-negative bacteria, the biogenesis of β-barrel outer membrane proteins (OMPs) is mediated by the β-barrel assembly machinery (BAM) complex. During the past decade, structural and functional studies have collectively contributed to advancing our understanding of the structure and function of the BAM complex; however, the exact mechanism that is involved remains elusive. In this Progress article, we discuss recent structural studies that have revealed that the accessory proteins may regulate essential unprecedented conformational changes in the core component BamA during function. We also detail the mechanistic insights that have been gained from structural data, mutagenesis studies and molecular dynamics simulations, and explore two emerging models for the BAM-mediated biogenesis of OMPs in bacteria.

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Year:  2017        PMID: 28216659      PMCID: PMC5455337          DOI: 10.1038/nrmicro.2016.191

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  73 in total

1.  DegP primarily functions as a protease for the biogenesis of β-barrel outer membrane proteins in the Gram-negative bacterium Escherichia coli.

Authors:  Xi Ge; Rui Wang; Jing Ma; Yang Liu; Anastasia N Ezemaduka; Peng R Chen; Xinmiao Fu; Zengyi Chang
Journal:  FEBS J       Date:  2014-01-15       Impact factor: 5.542

Review 2.  Evolution of the β-barrel assembly machinery.

Authors:  Chaille T Webb; Eva Heinz; Trevor Lithgow
Journal:  Trends Microbiol       Date:  2012-09-06       Impact factor: 17.079

Review 3.  Protein folding in the cell envelope of Escherichia coli.

Authors:  Jozefien De Geyter; Alexandra Tsirigotaki; Georgia Orfanoudaki; Valentina Zorzini; Anastassios Economou; Spyridoula Karamanou
Journal:  Nat Microbiol       Date:  2016-07-26       Impact factor: 17.745

4.  Dynamic periplasmic chaperone reservoir facilitates biogenesis of outer membrane proteins.

Authors:  Shawn M Costello; Ashlee M Plummer; Patrick J Fleming; Karen G Fleming
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-01       Impact factor: 11.205

5.  Structural basis for the interaction of BamB with the POTRA3-4 domains of BamA.

Authors:  Zhen Chen; Li Hong Zhan; Hai Feng Hou; Zeng Qiang Gao; Jian Hua Xu; Cheng Dong; Yu Hui Dong
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-01-22       Impact factor: 7.652

6.  The beta-barrel outer membrane protein assembly complex of Neisseria meningitidis.

Authors:  Elena B Volokhina; Frank Beckers; Jan Tommassen; Martine P Bos
Journal:  J Bacteriol       Date:  2009-09-18       Impact factor: 3.490

7.  Crystal structure of YaeT: conformational flexibility and substrate recognition.

Authors:  Petia Z Gatzeva-Topalova; Troy A Walton; Marcelo C Sousa
Journal:  Structure       Date:  2008-12-10       Impact factor: 5.006

8.  Structure of BamA, an essential factor in outer membrane protein biogenesis.

Authors:  Reinhard Albrecht; Monika Schütz; Philipp Oberhettinger; Michaela Faulstich; Ivan Bermejo; Thomas Rudel; Kay Diederichs; Kornelius Zeth
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-05-30

9.  Structural insight into the biogenesis of β-barrel membrane proteins.

Authors:  Nicholas Noinaj; Adam J Kuszak; James C Gumbart; Petra Lukacik; Hoshing Chang; Nicole C Easley; Trevor Lithgow; Susan K Buchanan
Journal:  Nature       Date:  2013-09-01       Impact factor: 49.962

10.  Crystal structure of BamB from Pseudomonas aeruginosa and functional evaluation of its conserved structural features.

Authors:  Katarina Bartoš Jansen; Susan Lynn Baker; Marcelo Carlos Sousa
Journal:  PLoS One       Date:  2012-11-26       Impact factor: 3.240

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  74 in total

1.  Overcoming Iron Deficiency of an Escherichia coli tonB Mutant by Increasing Outer Membrane Permeability.

Authors:  Nan Qiu; Rajeev Misra
Journal:  J Bacteriol       Date:  2019-08-08       Impact factor: 3.490

2.  Type 9 secretion system structures reveal a new protein transport mechanism.

Authors:  Frédéric Lauber; Justin C Deme; Susan M Lea; Ben C Berks
Journal:  Nature       Date:  2018-11-07       Impact factor: 49.962

3.  Chaperone OsmY facilitates the biogenesis of a major family of autotransporters.

Authors:  Zhen Yan; Sunyia Hussain; Xu Wang; Harris D Bernstein; James C A Bardwell
Journal:  Mol Microbiol       Date:  2019-10-09       Impact factor: 3.501

4.  A Screen for Antibiotic Resistance Determinants Reveals a Fitness Cost of the Flagellum in Pseudomonas aeruginosa.

Authors:  E A Rundell; N Commodore; A L Goodman; B I Kazmierczak
Journal:  J Bacteriol       Date:  2020-02-25       Impact factor: 3.490

Review 5.  The Principles of Protein Targeting and Transport Across Cell Membranes.

Authors:  Yuanyuan Chen; Sri Karthika Shanmugam; Ross E Dalbey
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

6.  C-terminal kink formation is required for lateral gating in BamA.

Authors:  Karl Lundquist; Jeremy Bakelar; Nicholas Noinaj; James C Gumbart
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-07       Impact factor: 11.205

7.  Structural basis for substrate selection by the translocation and assembly module of the β-barrel assembly machinery.

Authors:  Rebecca S Bamert; Karl Lundquist; Hyea Hwang; Chaille T Webb; Takoya Shiota; Christopher J Stubenrauch; Mathew J Belousoff; Robert J A Goode; Ralf B Schittenhelm; Richard Zimmerman; Martin Jung; James C Gumbart; Trevor Lithgow
Journal:  Mol Microbiol       Date:  2017-08-09       Impact factor: 3.501

8.  Two pKM101-encoded proteins, the pilus-tip protein TraC and Pep, assemble on the Escherichia coli cell surface as adhesins required for efficient conjugative DNA transfer.

Authors:  Christian González-Rivera; Pratick Khara; Dominik Awad; Roosheel Patel; Yang Grace Li; Maxim Bogisch; Peter J Christie
Journal:  Mol Microbiol       Date:  2018-10-21       Impact factor: 3.501

Review 9.  Transmembrane β-barrels: Evolution, folding and energetics.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-09-22       Impact factor: 3.747

Review 10.  The lipopolysaccharide transport (Lpt) machinery: A nonconventional transporter for lipopolysaccharide assembly at the outer membrane of Gram-negative bacteria.

Authors:  Paola Sperandeo; Alessandra M Martorana; Alessandra Polissi
Journal:  J Biol Chem       Date:  2017-09-06       Impact factor: 5.157

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