Literature DB >> 28213161

A genomic view of short tandem repeats.

Melissa Gymrek1.   

Abstract

Short tandem repeats (STRs) are some of the fastest mutating loci in the genome. Tools for accurately profiling STRs from high-throughput sequencing data have enabled genome-wide interrogation of more than a million STRs across hundreds of individuals. These catalogs have revealed that STRs are highly multiallelic and may contribute more de novo mutations than any other variant class. Recent studies have leveraged these catalogs to show that STRs play a widespread role in regulating gene expression and other molecular phenotypes. These analyses suggest that STRs are an underappreciated but rich reservoir of variation that likely make significant contributions to Mendelian diseases, complex traits, and cancer.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28213161     DOI: 10.1016/j.gde.2017.01.012

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  31 in total

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7.  The Impact of Next-Generation Sequencing on the Diagnosis, Treatment, and Prevention of Hereditary Neuromuscular Disorders.

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Review 8.  Molecular mechanisms underlying nucleotide repeat expansion disorders.

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Journal:  Nat Rev Mol Cell Biol       Date:  2021-06-17       Impact factor: 113.915

Review 9.  Functional Mechanisms of Microsatellite DNA in Eukaryotic Genomes.

Authors:  Andrew T M Bagshaw
Journal:  Genome Biol Evol       Date:  2017-09-01       Impact factor: 3.416

10.  PolyG-DS: An ultrasensitive polyguanine tract-profiling method to detect clonal expansions and trace cell lineage.

Authors:  Yuezheng Zhang; Brendan F Kohrn; Ming Yang; Daniela Nachmanson; T Rinda Soong; I-Hsiu Lee; Yong Tao; Hans Clevers; Elizabeth M Swisher; Teresa A Brentnall; Lawrence A Loeb; Scott R Kennedy; Jesse J Salk; Kamila Naxerova; Rosa Ana Risques
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-03       Impact factor: 11.205

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