Literature DB >> 28173117

Exploiting the CRISPR/Cas9 system to study alternative splicing in vivo: application to titin.

Karine Charton1,2, Laurence Suel1,2, Sara F Henriques1,2,3, Jean-Paul Moussu4, Matteo Bovolenta5, Miguel Taillepierre4, Céline Becker4, Karelia Lipson4, Isabelle Richard1,2.   

Abstract

The giant protein titin is the third most abundant protein in striated muscle. Mutations in its gene are responsible for diseases affecting the cardiac and/or the skeletal muscle. Titin has been reported to be expressed in multiple isoforms with considerable variability in the I-band, ensuring the modulation of the passive mechanical properties of the sarcomere. In the M-line, only the penultimate Mex5 exon coding for the specific is7 domain has been reported to be subjected to alternative splicing. Using the CRISPR-Cas9 editing technology, we generated a mouse model where we stably prevent the expression of alternative spliced variant(s) carrying the corresponding domain. Interestingly, the suppression of the domain induces a phenotype mostly in tissues usually expressing the isoform that has been suppressed, indicating that it fulfills (a) specific function(s) in these tissues allowing a perfect adaptation of the M-line to physiological demands of different muscles.

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Year:  2016        PMID: 28173117     DOI: 10.1093/hmg/ddw280

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  13 in total

1.  Titin splicing regulates cardiotoxicity associated with calpain 3 gene therapy for limb-girdle muscular dystrophy type 2A.

Authors:  William Lostal; Carinne Roudaut; Marine Faivre; Karine Charton; Laurence Suel; Nathalie Bourg; Heather Best; John Edward Smith; Jochen Gohlke; Guillaume Corre; Xidan Li; Zaher Elbeck; Ralph Knöll; Jack-Yves Deschamps; Henk Granzier; Isabelle Richard
Journal:  Sci Transl Med       Date:  2019-11-27       Impact factor: 17.956

2.  Extensive alternative splicing transitions during postnatal skeletal muscle development are required for calcium handling functions.

Authors:  Amy E Brinegar; Zheng Xia; James Anthony Loehr; Wei Li; George Gerald Rodney; Thomas A Cooper
Journal:  Elife       Date:  2017-08-11       Impact factor: 8.140

Review 3.  Alternative splicing as a regulator of development and tissue identity.

Authors:  Francisco E Baralle; Jimena Giudice
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-10       Impact factor: 94.444

4.  Rbfox-Splicing Factors Maintain Skeletal Muscle Mass by Regulating Calpain3 and Proteostasis.

Authors:  Ravi K Singh; Arseniy M Kolonin; Marta L Fiorotto; Thomas A Cooper
Journal:  Cell Rep       Date:  2018-07-03       Impact factor: 9.423

Review 5.  Titin mutations and muscle disease.

Authors:  Dalma Kellermayer; John E Smith; Henk Granzier
Journal:  Pflugers Arch       Date:  2019-03-27       Impact factor: 3.657

6.  Tissue-Specific Analysis of Alternative Splicing Events and Differential Isoform Expression in Large Yellow Croaker (Larimichthys crocea) After Cryptocaryon irritans Infection.

Authors:  Ang Qu; Yulin Bai; Xinyi Zhang; Junjia Zeng; Fei Pu; Linni Wu; Peng Xu; Tao Zhou
Journal:  Mar Biotechnol (NY)       Date:  2022-05-28       Impact factor: 3.619

Review 7.  Alternative splicing as a source of phenotypic diversity.

Authors:  Charlotte J Wright; Christopher W J Smith; Chris D Jiggins
Journal:  Nat Rev Genet       Date:  2022-07-12       Impact factor: 59.581

8.  Titin M-line insertion sequence 7 is required for proper cardiac function in mice.

Authors:  Ariane Biquand; Simone Spinozzi; Paola Tonino; Jérémie Cosette; Joshua Strom; Zaher Elbeck; Ralph Knöll; Henk Granzier; William Lostal; Isabelle Richard
Journal:  J Cell Sci       Date:  2021-09-17       Impact factor: 5.235

Review 9.  Methods and Applications of CRISPR-Mediated Base Editing in Eukaryotic Genomes.

Authors:  Gaelen T Hess; Josh Tycko; David Yao; Michael C Bassik
Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

10.  Frameshift indels introduced by genome editing can lead to in-frame exon skipping.

Authors:  Simon Lalonde; Oliver A Stone; Samuel Lessard; Adam Lavertu; Jessica Desjardins; Mélissa Beaudoin; Manuel Rivas; Didier Y R Stainier; Guillaume Lettre
Journal:  PLoS One       Date:  2017-06-01       Impact factor: 3.240

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