Literature DB >> 35821097

Alternative splicing as a source of phenotypic diversity.

Charlotte J Wright1,2, Christopher W J Smith3, Chris D Jiggins4.   

Abstract

A major goal of evolutionary genetics is to understand the genetic processes that give rise to phenotypic diversity in multicellular organisms. Alternative splicing generates multiple transcripts from a single gene, enriching the diversity of proteins and phenotypic traits. It is well established that alternative splicing contributes to key innovations over long evolutionary timescales, such as brain development in bilaterians. However, recent developments in long-read sequencing and the generation of high-quality genome assemblies for diverse organisms has facilitated comparisons of splicing profiles between closely related species, providing insights into how alternative splicing evolves over shorter timescales. Although most splicing variants are probably non-functional, alternative splicing is nonetheless emerging as a dynamic, evolutionarily labile process that can facilitate adaptation and contribute to species divergence.
© 2022. Springer Nature Limited.

Entities:  

Mesh:

Substances:

Year:  2022        PMID: 35821097     DOI: 10.1038/s41576-022-00514-4

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   59.581


  192 in total

Review 1.  Endless forms: the evolution of gene regulation and morphological diversity.

Authors:  S B Carroll
Journal:  Cell       Date:  2000-06-09       Impact factor: 41.582

Review 2.  Evolution at two levels in humans and chimpanzees.

Authors:  M C King; A C Wilson
Journal:  Science       Date:  1975-04-11       Impact factor: 47.728

Review 3.  Evolutionary developmental biology and the problem of variation.

Authors:  D L Stern
Journal:  Evolution       Date:  2000-08       Impact factor: 3.694

4.  An amazing sequence arrangement at the 5' ends of adenovirus 2 messenger RNA.

Authors:  L T Chow; R E Gelinas; T R Broker; R J Roberts
Journal:  Cell       Date:  1977-09       Impact factor: 41.582

Review 5.  Transcriptional regulators and the evolution of plant form.

Authors:  J Doebley; L Lukens
Journal:  Plant Cell       Date:  1998-07       Impact factor: 11.277

6.  Identification of genetic variants controlling RNA editing and their effect on RNA structure stabilization.

Authors:  Aziz Belkadi; Gaurav Thareja; Anna Halama; Yasmin Mahmoud; Danielle Jones; Sam Agnew; Joel Malek; Karsten Suhre
Journal:  Eur J Hum Genet       Date:  2020-07-10       Impact factor: 4.246

Review 7.  The roles of RNA processing in translating genotype to phenotype.

Authors:  Kassie S Manning; Thomas A Cooper
Journal:  Nat Rev Mol Cell Biol       Date:  2016-11-16       Impact factor: 94.444

8.  Spliced segments at the 5' terminus of adenovirus 2 late mRNA.

Authors:  S M Berget; C Moore; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

9.  Identification of genetic variants associated with alternative splicing using sQTLseekeR.

Authors:  Jean Monlong; Miquel Calvo; Pedro G Ferreira; Roderic Guigó
Journal:  Nat Commun       Date:  2014-08-20       Impact factor: 14.919

10.  SNP2APA: a database for evaluating effects of genetic variants on alternative polyadenylation in human cancers.

Authors:  Yanbo Yang; Qiong Zhang; Ya-Ru Miao; Jiajun Yang; Wenqian Yang; Fangda Yu; Dongyang Wang; An-Yuan Guo; Jing Gong
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

View more
  4 in total

Review 1.  The physiology of alternative splicing.

Authors:  Luciano E Marasco; Alberto R Kornblihtt
Journal:  Nat Rev Mol Cell Biol       Date:  2022-10-13       Impact factor: 113.915

2.  Clinical variant interpretation and biologically relevant reference transcripts.

Authors:  Fernando Pozo; José Manuel Rodriguez; Jesús Vázquez; Michael L Tress
Journal:  NPJ Genom Med       Date:  2022-10-18       Impact factor: 6.083

3.  High-quality reference transcriptome construction improves RNA-seq quantification in Oryza sativa indica.

Authors:  Nagesh Srikakulam; Ganapathi Sridevi; Gopal Pandi
Journal:  Front Genet       Date:  2022-09-29       Impact factor: 4.772

4.  Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing.

Authors:  Dailu Guan; Michelle M Halstead; Alma D Islas-Trejo; Daniel E Goszczynski; Hans H Cheng; Pablo J Ross; Huaijun Zhou
Journal:  Front Genet       Date:  2022-10-03       Impact factor: 4.772

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.