Literature DB >> 28128194

A molecular roadmap for induced multi-lineage trans-differentiation of fibroblasts by chemical combinations.

Xiaoping Han1,2,3,4, Hao Yu5, Daosheng Huang1,4, Yang Xu1,4, Assieh Saadatpour6, Xia Li1,4, Lengmei Wang7, Jie Yu8, Luca Pinello6, Shujing Lai1,4, Mengmeng Jiang1,4, Xueying Tian9, Fen Zhang1, Yanhong Cen1, Yuko Fujiwara2, Wei Zhu7, Bin Zhou10, Tianhua Zhou11, Hongwei Ouyang1,3, Jianan Wang7,4, Guo-Cheng Yuan6, Shumin Duan5, Stuart H Orkin2,7, Guoji Guo1,2,3,4.   

Abstract

Recent advances have demonstrated the power of small molecules in promoting cellular reprogramming. Yet, the full potential of such chemicals in cell fate manipulation and the underlying mechanisms require further characterization. Through functional screening assays, we find that mouse embryonic fibroblast cells can be induced to trans-differentiate into a wide range of somatic lineages simultaneously by treatment with a combination of four chemicals. Genomic analysis of the process indicates activation of multi-lineage modules and relaxation of epigenetic silencing programs. In addition, we identify Sox2 as an important regulator within the induced network. Single cell analysis uncovers a novel priming state that enables transition from fibroblast cells to diverse somatic lineages. Finally, we demonstrate that modification of the culture system enables directional trans-differentiation towards myocytic, glial or adipocytic lineages. Our study describes a cell fate control system that may be harnessed for regenerative medicine.

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Year:  2017        PMID: 28128194      PMCID: PMC5339836          DOI: 10.1038/cr.2017.17

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  34 in total

1.  Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

Authors:  Guoji Guo; Mikael Huss; Guo Qing Tong; Chaoyang Wang; Li Li Sun; Neil D Clarke; Paul Robson
Journal:  Dev Cell       Date:  2010-04-20       Impact factor: 12.270

2.  Generation of rat and human induced pluripotent stem cells by combining genetic reprogramming and chemical inhibitors.

Authors:  Wenlin Li; Wei Wei; Saiyong Zhu; Jinliang Zhu; Yan Shi; Tongxiang Lin; Ergeng Hao; Alberto Hayek; Hongkui Deng; Sheng Ding
Journal:  Cell Stem Cell       Date:  2008-12-18       Impact factor: 24.633

Review 3.  Molecules that promote or enhance reprogramming of somatic cells to induced pluripotent stem cells.

Authors:  Bo Feng; Jia-Hui Ng; Jian-Chien Dominic Heng; Huck-Hui Ng
Journal:  Cell Stem Cell       Date:  2009-04-03       Impact factor: 24.633

4.  Direct reprogramming of fibroblasts into neural stem cells by defined factors.

Authors:  Dong Wook Han; Natalia Tapia; Andreas Hermann; Kathrin Hemmer; Susanne Höing; Marcos J Araúzo-Bravo; Holm Zaehres; Guangming Wu; Stefan Frank; Sören Moritz; Boris Greber; Ji Hun Yang; Hoon Taek Lee; Jens C Schwamborn; Alexander Storch; Hans R Schöler
Journal:  Cell Stem Cell       Date:  2012-03-22       Impact factor: 24.633

5.  Conversion of human fibroblasts into functional cardiomyocytes by small molecules.

Authors:  Nan Cao; Yu Huang; Jiashun Zheng; C Ian Spencer; Yu Zhang; Ji-Dong Fu; Baoming Nie; Min Xie; Mingliang Zhang; Haixia Wang; Tianhua Ma; Tao Xu; Guilai Shi; Deepak Srivastava; Sheng Ding
Journal:  Science       Date:  2016-04-28       Impact factor: 47.728

6.  A chemical platform for improved induction of human iPSCs.

Authors:  Tongxiang Lin; Rajesh Ambasudhan; Xu Yuan; Wenlin Li; Simon Hilcove; Ramzey Abujarour; Xiangyi Lin; Heung Sik Hahm; Ergeng Hao; Alberto Hayek; Sheng Ding
Journal:  Nat Methods       Date:  2009-10-18       Impact factor: 28.547

7.  Small-Molecule-Driven Direct Reprogramming of Mouse Fibroblasts into Functional Neurons.

Authors:  Xiang Li; Xiaohan Zuo; Junzhan Jing; Yantao Ma; Jiaming Wang; Defang Liu; Jialiang Zhu; Xiaomin Du; Liang Xiong; Yuanyuan Du; Jun Xu; Xiong Xiao; Jinlin Wang; Zhen Chai; Yang Zhao; Hongkui Deng
Journal:  Cell Stem Cell       Date:  2015-08-06       Impact factor: 24.633

8.  Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules.

Authors:  Yunfang Wang; Jinhua Qin; Shuyong Wang; Wencheng Zhang; Jialei Duan; Jing Zhang; Xin Wang; Fang Yan; Mingyang Chang; Xiaofang Liu; Bo Feng; Jiang Liu; Xuetao Pei
Journal:  Cell Stem Cell       Date:  2016-07-21       Impact factor: 24.633

9.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

10.  Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds.

Authors:  Danwei Huangfu; René Maehr; Wenjun Guo; Astrid Eijkelenboom; Melinda Snitow; Alice E Chen; Douglas A Melton
Journal:  Nat Biotechnol       Date:  2008-06-22       Impact factor: 54.908

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  9 in total

Review 1.  Epigenetic memory in development and disease: Unraveling the mechanism.

Authors:  Sam Thiagalingam
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2020-01-23       Impact factor: 10.680

Review 2.  Small molecules for reprogramming and transdifferentiation.

Authors:  Hua Qin; Andong Zhao; Xiaobing Fu
Journal:  Cell Mol Life Sci       Date:  2017-07-11       Impact factor: 9.261

3.  Reprogramming of fibroblasts into expandable cardiovascular progenitor cells via small molecules in xeno-free conditions.

Authors:  Jia Wang; Shanshan Gu; Fang Liu; Zihao Chen; He Xu; Zhun Liu; Weisheng Cheng; Linwei Wu; Tao Xu; Zhongyan Chen; Ding Chen; Xuena Chen; Fanzhu Zeng; Zhiju Zhao; Mingliang Zhang; Nan Cao
Journal:  Nat Biomed Eng       Date:  2022-03-31       Impact factor: 29.234

4.  Maturity of associating liver partition and portal vein ligation for staged hepatectomy-derived liver regeneration in a rat model.

Authors:  Yi-Fan Tong; Ning Meng; Miao-Qin Chen; Han-Ning Ying; Ming Xu; Billy Lu; Jun-Jie Hong; Yi-Fan Wang; Xiu-Jun Cai
Journal:  World J Gastroenterol       Date:  2018-03-14       Impact factor: 5.742

5.  Polycomb repressive complex 1 shapes the nucleosome landscape but not accessibility at target genes.

Authors:  Hamish W King; Nadezda A Fursova; Neil P Blackledge; Robert J Klose
Journal:  Genome Res       Date:  2018-08-28       Impact factor: 9.043

6.  Chemical Cocktail Induces Hematopoietic Reprogramming and Expands Hematopoietic Stem/Progenitor Cells.

Authors:  Yi Zhou; Xingli Zhu; Yuting Dai; Shumin Xiong; Chuijin Wei; Pei Yu; Yuewen Tang; Liang Wu; Jianfeng Li; Dan Liu; Yanlin Wang; Zhu Chen; Sai-Juan Chen; Jinyan Huang; Lin Cheng
Journal:  Adv Sci (Weinh)       Date:  2019-11-11       Impact factor: 16.806

7.  Cell Atlas technologies and insights into tissue architecture.

Authors:  Anna Wilbrey-Clark; Kenny Roberts; Sarah A Teichmann
Journal:  Biochem J       Date:  2020-04-30       Impact factor: 3.857

8.  High-Resolution Dissection of Chemical Reprogramming from Mouse Embryonic Fibroblasts into Fibrocartilaginous Cells.

Authors:  Yishan Chen; Bingbing Wu; Junxin Lin; Dongsheng Yu; Xiaotian Du; Zixuan Sheng; Yeke Yu; Chengrui An; Xiaoan Zhang; Qikai Li; Shouan Zhu; Heng Sun; Xianzhu Zhang; Shufang Zhang; Jing Zhou; Varitsara Bunpetch; Ahmed El-Hashash; Junfeng Ji; Hongwei Ouyang
Journal:  Stem Cell Reports       Date:  2020-02-20       Impact factor: 7.765

9.  Chemicals orchestrate reprogramming with hierarchical activation of master transcription factors primed by endogenous Sox17 activation.

Authors:  Zhenghao Yang; Xiaochan Xu; Chan Gu; Jun Li; Qihong Wu; Can Ye; Alexander Valentin Nielsen; Lichao Mao; Junqing Ye; Ke Bai; Fan Guo; Chao Tang; Yang Zhao
Journal:  Commun Biol       Date:  2020-10-30
  9 in total

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