Literature DB >> 28118814

Bxb1 phage recombinase assists genome engineering in Drosophila melanogaster.

Roumen Voutev1, Richard S Mann1.   

Abstract

Rapid and reliable genome modifications provide the basis for detailed in vivo functional analysis of any genomic entity (gene, regulatory DNA, non-coding RNA, etc). With the advent of CRISPR/Cas9 genome editing technology, manipulation of a particular genomic locus has become a routine undertaking in variety of model organisms, including the fruit fly Drosophila melanogaster. To further diversify the available tools for genome engineering, we successfully harnessed the phage recombinase Bxb1 to perform recombinase-mediated cassette exchange (RMCE) in D. melanogaster. We demonstrate that Bxb1 possesses highly efficient recombinase activity and could be used alone or in conjunction with other currently available recombinases for creating platforms for cassette exchange of targeted loci.

Entities:  

Keywords:  Bxb1 recombinase; Drosophila melanogaster; cassette exchange; genome editing

Mesh:

Substances:

Year:  2017        PMID: 28118814      PMCID: PMC5464966          DOI: 10.2144/000114494

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  15 in total

1.  The orientation of mycobacteriophage Bxb1 integration is solely dependent on the central dinucleotide of attP and attB.

Authors:  Pallavi Ghosh; Amy I Kim; Graham F Hatfull
Journal:  Mol Cell       Date:  2003-11       Impact factor: 17.970

2.  Site-specific transgenesis by Cre-mediated recombination in Drosophila.

Authors:  Adam Oberstein; Adam Pare; Leah Kaplan; Stephen Small
Journal:  Nat Methods       Date:  2005-08       Impact factor: 28.547

3.  Multiple new site-specific recombinases for use in manipulating animal genomes.

Authors:  Aljoscha Nern; Barret D Pfeiffer; Karel Svoboda; Gerald M Rubin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-09       Impact factor: 11.205

4.  Successive and targeted DNA integrations in the Drosophila genome by Bxb1 and phiC31 integrases.

Authors:  Juan Huang; Pallavi Ghosh; Graham F Hatfull; Yang Hong
Journal:  Genetics       Date:  2011-06-06       Impact factor: 4.562

5.  MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes.

Authors:  Koen J T Venken; Karen L Schulze; Nele A Haelterman; Hongling Pan; Yuchun He; Martha Evans-Holm; Joseph W Carlson; Robert W Levis; Allan C Spradling; Roger A Hoskins; Hugo J Bellen
Journal:  Nat Methods       Date:  2011-09       Impact factor: 28.547

6.  The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome.

Authors:  K G Golic; S Lindquist
Journal:  Cell       Date:  1989-11-03       Impact factor: 41.582

7.  Transgene Coplacement and high efficiency site-specific recombination with the Cre/loxP system in Drosophila.

Authors:  M L Siegal; D L Hartl
Journal:  Genetics       Date:  1996-10       Impact factor: 4.562

8.  Site-specific recombination systems for the genetic manipulation of eukaryotic genomes.

Authors:  James G Thomson; David W Ow
Journal:  Genesis       Date:  2006-10       Impact factor: 2.487

9.  A transposable P vector that confers selectable G418 resistance to Drosophila larvae.

Authors:  H Steller; V Pirrotta
Journal:  EMBO J       Date:  1985-01       Impact factor: 11.598

10.  Genome engineering of Drosophila with the CRISPR RNA-guided Cas9 nuclease.

Authors:  Scott J Gratz; Alexander M Cummings; Jennifer N Nguyen; Danielle C Hamm; Laura K Donohue; Melissa M Harrison; Jill Wildonger; Kate M O'Connor-Giles
Journal:  Genetics       Date:  2013-05-24       Impact factor: 4.562

View more
  5 in total

1.  Parallel Genomic Engineering of Two Drosophila Genes Using Orthogonal attB/attP Sites.

Authors:  Beatriz Blanco-Redondo; Tobias Langenhan
Journal:  G3 (Bethesda)       Date:  2018-08-30       Impact factor: 3.154

2.  Fluorescent labeling of genomic loci in Drosophila imaginal discs with heterologous DNA-binding proteins.

Authors:  Rebecca K Delker; Ross H Munce; Michelle Hu; Richard S Mann
Journal:  Cell Rep Methods       Date:  2022-03-09

Review 3.  In vivo genome editing thrives with diversified CRISPR technologies.

Authors:  Xun Ma; Avery Sum-Yu Wong; Hei-Yin Tam; Samuel Yung-Kin Tsui; Dittman Lai-Shun Chung; Bo Feng
Journal:  Zool Res       Date:  2018-03-18

4.  Robust ΦC31-Mediated Genome Engineering in Drosophila melanogaster Using Minimal attP/attB Phage Sites.

Authors:  Roumen Voutev; Richard S Mann
Journal:  G3 (Bethesda)       Date:  2018-05-04       Impact factor: 3.154

5.  TP901-1 Phage Recombinase Facilitates Genome Engineering in Drosophila melanogaster.

Authors:  Roumen Voutev; Richard S Mann
Journal:  G3 (Bethesda)       Date:  2019-04-09       Impact factor: 3.154

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.