| Literature DB >> 28102563 |
Pinaki Bhattacharya1, Marco Viceconti1.
Abstract
More and more frequently, computational biomechanics deals with problems where the portion of physical reality to be modeled spans over such a large range of spatial and temporal dimensions, that it is impossible to represent it as a single space-time continuum. We are forced to consider multiple space-time continua, each representing the phenomenon of interest at a characteristic space-time scale. Multiscale models describe a complex process across multiple scales, and account for how quantities transform as we move from one scale to another. This review offers a set of definitions for this emerging field, and provides a brief summary of the most recent developments on multiscale modeling in biomechanics. Of all possible perspectives, we chose that of the modeling intent, which vastly affect the nature and the structure of each research activity. To the purpose we organized all papers reviewed in three categories: 'causal confirmation,' where multiscale models are used as materializations of the causation theories; 'predictive accuracy,' where multiscale modeling is aimed to improve the predictive accuracy; and 'determination of effect,' where multiscale modeling is used to model how a change at one scale manifests in an effect at another radically different space-time scale. Consistent with how the volume of computational biomechanics research is distributed across application targets, we extensively reviewed papers targeting the musculoskeletal and the cardiovascular systems, and covered only a few exemplary papers targeting other organ systems. The review shows a research subdomain still in its infancy, where causal confirmation papers remain the most common. WIREs Syst Biol Med 2017, 9:e1375. doi: 10.1002/wsbm.1375 For further resources related to this article, please visit the WIREs website.Entities:
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Year: 2017 PMID: 28102563 PMCID: PMC5412936 DOI: 10.1002/wsbm.1375
Source DB: PubMed Journal: Wiley Interdiscip Rev Syst Biol Med ISSN: 1939-005X
Figure 1Incidence of multiscale papers indexed in PubMed from 1991 to 2015. Incidence is obtained by dividing for each year the number of papers retrieved with the search ‘Multiscale [ALL]’ by the total number of papers indexed in that year.
Figure 2Model hierarchy of MTLT (CIR and INT) tissues. (Reprinted with permission from Ref 34. Copyright 2014 Springer‐Verlag)
Figure 3Micromechanical representation of bone material by means of a five‐step homogenization procedure. (Reprinted with permission from Ref 36. Copyright 2007 Elsevier)
Figure 4Complete model of the muscle exhibits three blocks. (Reprinted with permission from Ref 41. Copyright 2011 Springer‐Verlag)
Summary of Multiscale Musculoskeletal Biomechanics Models
| Application |
|
|
| Component Hypomodels | Relation Hypomodels |
|---|---|---|---|---|---|
| I | I | I | |||
| O | |||||
| Bone tissue mechanics |
|
|
| Elasticity, yield, viscoelastic creep models at each scale | Homogenization models (e.g., Mori–Tanaka) |
| Volume fractions, elasticity, viscosity of water and collagen, shape of intermolecular spaces | Volume fraction and shape of lacunar spaces, elasticity of extracellular bone matrix | Volume fractions, inclusion shapes, elasticity and creep of wet collagen, HA crystals, intercrystal‐line void spaces and collagen fibrils | |||
| Stiffness, anisotropy, strength, viscoelasticity | |||||
| Skeletal muscle electromechanics |
|
|
| Models for sarcomere mechanics, fiber activation and mechanics, muscle recruitment and mechanics | Models for cross‐bridge distribution in sarcomere controlled by muscle activation, for affine stretch transformation between fiber and sarcomere scales, for averaging of fiber response to obtain muscle response |
| Cross‐bridge attachment and detachment rates, rest length and stiffness | Fiber recruitment states, lumped mechanical model parameters: rest length, stiffness, mass, damping | Electrical stimulation, activation model parameters | |||
| Muscle force | |||||
| Tendon mechanics |
|
| Fibril and interfibrillar matrix elasto‐plasticity laws | Shear lag model to homogenize between fibril and fascile | |
| Radius, length, elastic modulus of fibril; interfibrillar matrix stiffness and yield parameters | Volume fraction of fibrils, probability distribution of fully uncrimped fibrils | ||||
| Fascicle elasto‐plasticity |
For each application (first column), the following scales are detailed in columns 2–4: the smallest scale S1, the scale S2 at which model prediction is desired, all other scales. For each scale, the inputs (I) used in the multiscale model are listed. For scale S2, the set of variables to be predicted (O) are also listed. For each multiscale modeling application, the component models at each scale, and relation models between the scales, are indicated in the last two columns.
Figure 5Multiscale model of cardiopulmonary bypass. (Reprinted with permission from Ref 76. Copyright 2014 Elsevier)
Figure 6Multiscale model of a red blood cell: (a) complete cell model; (b) molecular‐detailed junctional complex model; and (c) spectrin (Sp) model. (Reprinted with permission from Ref 89. Copyright 2010 American Physical Society)
Figure 7Basic topological interactions composing the multilevel model of endotoxin induced human inflammation. (Reprinted with permission from Ref 95. Copyright 2009 Wolters Kluwer Health, Inc.)
Figure 8Establishing ‘determination of effect’ of RBC membrane microstructural details on tank‐treading dynamics of RBC in shear flow. ‘Simulation’ refers to the multiscale model89, 90, 91, 100 and ‘single‐layer model’ refers to a single‐scale model. The multiscale model simulation with zero membrane viscosity (v = v = 0) retrieves the single‐scale model result. With a nonzero membrane viscosity, the multiscale model compares better with the experimental results. (Reprinted with permission from Ref 100. Copyright 2011 Cambridge University Press)
Summary of Multiscale Modeling Approaches in Cardiovascular Biomechanics
| Application |
|
|
| Component Hypomodels | Relation Hypomodels |
|---|---|---|---|---|---|
| I | I | I | |||
| O | |||||
| Heart rate regulation |
|
|
| Cellular transcription dynamics model, models for heart rate control, and for HPA and SNS activity | Model for pro‐inflammatory signal from cell to HPA and SNA, for anti‐inflammatory influence of HPA and SNS on cellular processes, and for biochemical input from SNS to the heart |
| Endotoxemic signal, parameters controlling pro‐inflammatory pathways and transcriptional response | Biochemical input from sympathetic nervous system (SNS), parameters regulating heart function | Pro‐inflammatory signals, parameters controlling hypothalamic–pituitary–adrenal (HPA) axis and SNS activity | |||
| Autonomic outflow and heart rate | |||||
| Red blood cell mechanics |
|
|
| Worm‐like chain model for Sp mechanics, spoked hexagon unit cell model for the JC, area and enclosed volume conservation laws for whole cell | Models for mechanical interactions between Sp and JC, for homogenization of JC mechanics to obtain cellular cytoskeleton–bilayer system mechanics |
| Stretch, contour length, persistence length of Spectrin (Sp) molecule | Viscoelasticity of the cytoskeleton–bilayer system, enclosed volume and surface area, mechanical interactions with surrounding plasma fluid | Geometry parameters, mechanical properties of the lipid bilayer and the actin proto‐filament | |||
| Cell resting shapes, response to micropipette aspiration, stretching, tumbling and tank‐treading behavior in shear flow | |||||
| Cranial venous circulation |
|
|
| 1‐D circulation model, windkessel model for microcirculation | Boundary conditions for flow and pressure at junctions |
| Lumped model parameters, flow and pressure boundary conditions, source of circulation forcing in the heart | Network graph, segmental geometry and elasticity, intersegmental boundary conditions on pressure and flow | Lumped model parameters, inlet and outlet flow and pressure conditions | |||
| Blood flow in head and neck veins |
For each application (first column), the following scales are detailed in columns 2–4: the smallest scale S1, the scale S2 at which model prediction is desired, all other scales. For each scale, the inputs (I) used in the multiscale model are listed. For scale S2, the set of variables to be predicted (O) are also listed. For each multiscale modeling application, the component models at each scale, and relation models between the scales, are indicated in the last two columns.
Figure 9Different spatial scales identified in the modeling of the gastrointestinal system. (Reprinted with permission from Ref 104. Copyright 2010 Wiley)
Figure 10Multiscale modeling of lymphatic drainage. (Reprinted with permission from Ref 120. Copyright 2012 Elsevier)
Summary of the Reviewed Literature
| Application Area | Causal Confirmation | Predictive Accuracy | Determination of Effect | All Categories |
|---|---|---|---|---|
| Musculoskeletal | 20 | 8 | 0 | 28 |
| Cardiovascular | 30 | 4 | 1 | 35 |
| Other | 22 | 0 | 0 | 22 |
| All areas | 72 | 12 | 1 | 85 |