Literature DB >> 28095716

CircRNAs: a regulator of cellular stress.

Joseph W Fischer1,2, Anthony K L Leung1,2,3.   

Abstract

Circular RNAs (CircRNAs) were first identified as a viroid and later found to also be an endogenous RNA splicing product in eukaryotes. In recent years, a series of RNA-sequencing analyses from a diverse range of eukaryotes have shed new light on these eukaryotic circRNAs, revealing dynamic expression patterns in various developmental stages and physiological conditions. In this review, we focus on circRNAs implicated in stress response pathways and explore potential mechanisms underlying their regulation. To date, circRNAs have been shown to act as scaffolds in the assembly of protein complexes, sequester proteins from native subcellular localization, activate transcription of parental genes, inhibit RNA-protein interactions, and function as regulators of microRNA activity. Although the mechanism modulating circRNA levels during stress remains unclear, circRNAs are shown to be regulated during biogenesis, degradation, and exportation. As circRNAs do not have 5' and 3' ends, there are no entry points for exoribonucleases to initiate degradation. Such inherent stability makes this class of RNA a strong candidate to maintain homeostasis in the face of environmental challenges.

Entities:  

Keywords:  Circular RNA; RNA stability; back-splicing; circRNA biogenesis; circRNA degradation; circularization; environment; stress

Mesh:

Substances:

Year:  2017        PMID: 28095716      PMCID: PMC5526226          DOI: 10.1080/10409238.2016.1276882

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  103 in total

1.  Circular RNA expression alterations are involved in OGD/R-induced neuron injury.

Authors:  Shao-Peng Lin; Shan Ye; Youming Long; Yongxiang Fan; Hai-Feng Mao; Mei-Ting Chen; Qiu-Jie Ma
Journal:  Biochem Biophys Res Commun       Date:  2016-02-02       Impact factor: 3.575

2.  Scrambled exons.

Authors:  J M Nigro; K R Cho; E R Fearon; S E Kern; J M Ruppert; J D Oliner; K W Kinzler; B Vogelstein
Journal:  Cell       Date:  1991-02-08       Impact factor: 41.582

Review 3.  Circular RNAs: Unexpected outputs of many protein-coding genes.

Authors:  Jeremy E Wilusz
Journal:  RNA Biol       Date:  2016-08-29       Impact factor: 4.652

4.  Inducible RasGEF1B circular RNA is a positive regulator of ICAM-1 in the TLR4/LPS pathway.

Authors:  Wei Lun Ng; Georgi K Marinov; Ee Shan Liau; Yi Lyn Lam; Yat-Yuen Lim; Chee-Kwee Ea
Journal:  RNA Biol       Date:  2016-06-30       Impact factor: 4.652

Review 5.  Oxidative stress and stress-activated signaling pathways: a unifying hypothesis of type 2 diabetes.

Authors:  Joseph L Evans; Ira D Goldfine; Betty A Maddux; Gerold M Grodsky
Journal:  Endocr Rev       Date:  2002-10       Impact factor: 19.871

6.  RNA binding protein QKI inhibits the ischemia/reperfusion-induced apoptosis in neonatal cardiomyocytes.

Authors:  Wangang Guo; Xiaoqin Shi; Anheng Liu; Guodong Yang; Fang Yu; Qiangsun Zheng; Zikuan Wang; David G Allen; Zifan Lu
Journal:  Cell Physiol Biochem       Date:  2011-12-14

Review 7.  MicroRNA control of signal transduction.

Authors:  Masafumi Inui; Graziano Martello; Stefano Piccolo
Journal:  Nat Rev Mol Cell Biol       Date:  2010-03-10       Impact factor: 94.444

8.  A novel regulatory network among LncRpa, CircRar1, MiR-671 and apoptotic genes promotes lead-induced neuronal cell apoptosis.

Authors:  Aruo Nan; Lijian Chen; Nan Zhang; Zhenzhong Liu; Ti Yang; Zhishan Wang; Chengfeng Yang; Yiguo Jiang
Journal:  Arch Toxicol       Date:  2016-09-07       Impact factor: 5.153

9.  Comprehensive circular RNA profiling reveals that circular RNA100783 is involved in chronic CD28-associated CD8(+)T cell ageing.

Authors:  Yu-Hong Wang; Xu-Hui Yu; Shan-Shun Luo; Hui Han
Journal:  Immun Ageing       Date:  2015-10-08       Impact factor: 6.400

10.  Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins.

Authors:  Marianne C Kramer; Dongming Liang; Deirdre C Tatomer; Beth Gold; Zachary M March; Sara Cherry; Jeremy E Wilusz
Journal:  Genes Dev       Date:  2015-10-08       Impact factor: 11.361

View more
  58 in total

1.  Characterization and Cloning of Grape Circular RNAs Identified the Cold Resistance-Related Vv-circATS1.

Authors:  Zhen Gao; Jing Li; Meng Luo; Hui Li; Qiuju Chen; Lei Wang; Shiren Song; Liping Zhao; Wenping Xu; Caixi Zhang; Shiping Wang; Chao Ma
Journal:  Plant Physiol       Date:  2019-04-08       Impact factor: 8.340

2.  CircRNA TGFBR2/MiR-25-3p/TWIST1 axis regulates osteoblast differentiation of human aortic valve interstitial cells.

Authors:  Cheng Yu; Dannan Wu; Chong Zhao; Chaoguang Wu
Journal:  J Bone Miner Metab       Date:  2020-10-18       Impact factor: 2.626

Review 3.  Peptides encoded by noncoding genes: challenges and perspectives.

Authors:  Shuo Wang; Chuanbin Mao; Shanrong Liu
Journal:  Signal Transduct Target Ther       Date:  2019-12-13

4.  Engineering and expressing circular RNAs via tRNA splicing.

Authors:  John J Noto; Casey A Schmidt; A Gregory Matera
Journal:  RNA Biol       Date:  2017-04-12       Impact factor: 4.652

5.  Sensing Self and Foreign Circular RNAs by Intron Identity.

Authors:  Y Grace Chen; Myoungjoo V Kim; Xingqi Chen; Pedro J Batista; Saeko Aoyama; Jeremy E Wilusz; Akiko Iwasaki; Howard Y Chang
Journal:  Mol Cell       Date:  2017-06-15       Impact factor: 17.970

6.  BBS4 Is Essential for Nuclear Transport of Transcription Factors Mediating Neuronal ER Stress Response.

Authors:  Avital Horwitz; Ruth Birk
Journal:  Mol Neurobiol       Date:  2020-09-07       Impact factor: 5.590

7.  Characterization of novel small RNAs (sRNAs) contributing to the desiccation response of Salmonella enterica serovar Typhimurium.

Authors:  Emmaline C Barnhill; Aline Crucello; Dominika Houserova; Valeria M King; Shivam V Amin; Justin T Roberts; Michael E Zambrano; Jeffrey D DeMeis; Donavon J Dahmer; Zara Ijaz; Addison A Barchie; Brianna C Watters; James E Prusak; Meghan A Dean; Nathaniel W Holton; Jaire A Ferreira-Filho; Anderson S Sant'Ana; Michael P Spector; Glen M Borchert
Journal:  RNA Biol       Date:  2019-08-15       Impact factor: 4.652

8.  Circular RNA biogenesis is decreased in postmortem cortical gray matter in schizophrenia and may alter the bioavailability of associated miRNA.

Authors:  Ebrahim Mahmoudi; Chantel Fitzsimmons; Michael P Geaghan; Cynthia Shannon Weickert; Joshua R Atkins; Xi Wang; Murray J Cairns
Journal:  Neuropsychopharmacology       Date:  2019-02-20       Impact factor: 7.853

9.  A Circular RNA from the MDM2 Locus Controls Cell Cycle Progression by Suppressing p53 Levels.

Authors:  Ritu Chaudhary; Bruna R Muys; Ioannis Grammatikakis; Supriyo De; Kotb Abdelmohsen; Xiao Ling Li; Yuelin Zhu; Swapna Vidhur Daulatabad; Dimitrios Tsitsipatis; Paul S Meltzer; Myriam Gorospe; Sarath Chandra Janga; Ashish Lal
Journal:  Mol Cell Biol       Date:  2020-04-13       Impact factor: 4.272

10.  Genome-wide analysis of circular RNAs involved in Marek's disease tumourigenesis in chickens.

Authors:  Lulu Wang; Zhen You; Mingyue Wang; Yiming Yuan; Changjun Liu; Ning Yang; Hao Zhang; Ling Lian
Journal:  RNA Biol       Date:  2020-01-17       Impact factor: 4.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.