Literature DB >> 30786269

Circular RNA biogenesis is decreased in postmortem cortical gray matter in schizophrenia and may alter the bioavailability of associated miRNA.

Ebrahim Mahmoudi1,2,3, Chantel Fitzsimmons1,2,3, Michael P Geaghan1,2,3, Cynthia Shannon Weickert4,5,6, Joshua R Atkins1,2,3, Xi Wang7, Murray J Cairns8,9,10.   

Abstract

Circular RNAs (circRNAs) are a covalently closed subclass of non-coding RNA molecules formed by back splicing of linear precursor RNA. These molecules are relatively stable and particularly abundant in the mammalian brain and therefore may participate in neural development and function. With the emergence of circRNAs activity in gene regulation, these molecules have been implicated in several biological processes, including synaptic plasticity, and we therefore suspect they may have a role in neurobehavioral disorders. Here, we profile cortical circRNAs expression in 35 postmortem cortical gray matter (BA46) schizophrenia and a non-psychiatric comparison group, using circRNA enrichment sequencing. While more than 90,000 circRNAs species were identified in the dorsolateral prefrontal cortex (DLPFC), we observed lower complexity and substantial depletion in subjects with the disorder. Although circRNAs expression was independent of their host gene transcription, alternative splicing rates were lower in samples from cases compared to controls. Gene set analysis of differentially expressed circRNAs host genes revealed significant enrichment of neural functions and neurological disorders. Many of these depleted circRNAs are also predicted to sequester miRNAs that were shown previously to be increased in the disorder, potentially exacerbating the functional impact of their dysregulation through posttranscriptional gene silencing. While this is the first reported exploration of circRNAs in schizophrenia, there is significant potential for dysregulation more broadly in other major mental illnesses and behavioral disorders. Given their capacity for modulating miRNA function, circRNA may play a significant role in the pathophysiology of disease and even be targeted for therapeutic manipulation.

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Year:  2019        PMID: 30786269      PMCID: PMC6461776          DOI: 10.1038/s41386-019-0348-1

Source DB:  PubMed          Journal:  Neuropsychopharmacology        ISSN: 0893-133X            Impact factor:   7.853


  60 in total

1.  Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.

Authors:  Andranik Ivanov; Sebastian Memczak; Emanuel Wyler; Francesca Torti; Hagit T Porath; Marta R Orejuela; Michael Piechotta; Erez Y Levanon; Markus Landthaler; Christoph Dieterich; Nikolaus Rajewsky
Journal:  Cell Rep       Date:  2014-12-31       Impact factor: 9.423

2.  FMRP-Mediated Axonal Delivery of miR-181d Regulates Axon Elongation by Locally Targeting Map1b and Calm1.

Authors:  Bin Wang; Lin Pan; Manyi Wei; Qiong Wang; Wen-Wen Liu; Nuoxin Wang; Xing-Yu Jiang; Xu Zhang; Lan Bao
Journal:  Cell Rep       Date:  2015-12-17       Impact factor: 9.423

3.  Detecting and characterizing circular RNAs.

Authors:  William R Jeck; Norman E Sharpless
Journal:  Nat Biotechnol       Date:  2014-05       Impact factor: 54.908

4.  The RNA binding protein quaking regulates formation of circRNAs.

Authors:  Simon J Conn; Katherine A Pillman; John Toubia; Vanessa M Conn; Marika Salmanidis; Caroline A Phillips; Suraya Roslan; Andreas W Schreiber; Philip A Gregory; Gregory J Goodall
Journal:  Cell       Date:  2015-03-12       Impact factor: 41.582

5.  Experience-Dependent Accumulation of N6-Methyladenosine in the Prefrontal Cortex Is Associated with Memory Processes in Mice.

Authors:  Jocelyn Widagdo; Qiong-Yi Zhao; Marie-Jeanne Kempen; Men Chee Tan; Vikram S Ratnu; Wei Wei; Laura Leighton; Paola A Spadaro; Janette Edson; Victor Anggono; Timothy W Bredy
Journal:  J Neurosci       Date:  2016-06-22       Impact factor: 6.167

6.  starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data.

Authors:  Jian-Hua Yang; Jun-Hao Li; Peng Shao; Hui Zhou; Yue-Qin Chen; Liang-Hu Qu
Journal:  Nucleic Acids Res       Date:  2010-10-30       Impact factor: 16.971

7.  circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.

Authors:  Xiaoping Chen; Ping Han; Tao Zhou; Xuejiang Guo; Xiaofeng Song; Yan Li
Journal:  Sci Rep       Date:  2016-10-11       Impact factor: 4.379

Review 8.  Tracing Early Neurodevelopment in Schizophrenia with Induced Pluripotent Stem Cells.

Authors:  Ruhel Ahmad; Vincenza Sportelli; Michael Ziller; Dietmar Spengler; Anke Hoffmann
Journal:  Cells       Date:  2018-09-17       Impact factor: 6.600

9.  Schizophrenia is associated with an increase in cortical microRNA biogenesis.

Authors:  N J Beveridge; E Gardiner; A P Carroll; P A Tooney; M J Cairns
Journal:  Mol Psychiatry       Date:  2009-09-01       Impact factor: 15.992

10.  CircRNA-protein complexes: IMP3 protein component defines subfamily of circRNPs.

Authors:  Tim Schneider; Lee-Hsueh Hung; Silke Schreiner; Stefan Starke; Heinrich Eckhof; Oliver Rossbach; Stefan Reich; Jan Medenbach; Albrecht Bindereif
Journal:  Sci Rep       Date:  2016-08-11       Impact factor: 4.379

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  19 in total

Review 1.  Role of circular RNAs in brain development and CNS diseases.

Authors:  Suresh L Mehta; Robert J Dempsey; Raghu Vemuganti
Journal:  Prog Neurobiol       Date:  2020-01-10       Impact factor: 11.685

Review 2.  Expression and function of circular RNAs in the mammalian brain.

Authors:  Kaiyu Xu; Ying Zhang; Jiali Li
Journal:  Cell Mol Life Sci       Date:  2021-02-08       Impact factor: 9.261

3.  Circular RNA profile in coronary artery disease.

Authors:  Ren-You Pan; Chen-Hui Zhao; Jin-Xia Yuan; Yong-Jie Zhang; Jian-Liang Jin; Mu-Feng Gu; Zhi-Yuan Mao; Hai-Jian Sun; Qiao-Wei Jia; Ming-Yue Ji; Jing Zhang; Lian-Sheng Wang; Wen-Zhu Ma; Wen-Qi Ma; Jian-Dong Ding; En-Zhi Jia
Journal:  Am J Transl Res       Date:  2019-11-15       Impact factor: 4.060

Review 4.  Circular RNA: A novel and potential regulator in pathophysiology of schizophrenia.

Authors:  Mandakini Singh; Sushree Lipsa Lopamudra Dwibedy; Smruti Rekha Biswal; Srinivasan Muthuswamy; Ajay Kumar; Santosh Kumar
Journal:  Metab Brain Dis       Date:  2022-04-18       Impact factor: 3.655

5.  Dysregulation of circRNA expression in the peripheral blood of individuals with schizophrenia and bipolar disorder.

Authors:  Ebrahim Mahmoudi; Melissa J Green; Murray J Cairns
Journal:  J Mol Med (Berl)       Date:  2021-03-29       Impact factor: 4.599

Review 6.  Circular RNAs: Expression, localization, and therapeutic potentials.

Authors:  Qiwei Yang; Feiya Li; Alina T He; Burton B Yang
Journal:  Mol Ther       Date:  2021-01-21       Impact factor: 11.454

7.  A bidirectional competitive interaction between circHomer1 and Homer1b within the orbitofrontal cortex regulates reversal learning.

Authors:  Alexander K Hafez; Amber J Zimmerman; Grigorios Papageorgiou; Jayapriya Chandrasekaran; Stephen K Amoah; Rixing Lin; Evelyn Lozano; Caroline Pierotti; Michela Dell'Orco; Brigham J Hartley; Begüm Alural; Jasmin Lalonde; John Matthew Esposito; Sabina Berretta; Alessio Squassina; Caterina Chillotti; Georgios Voloudakis; Zhiping Shao; John F Fullard; Kristen J Brennand; Gustavo Turecki; Panos Roussos; Roy H Perlis; Stephen J Haggarty; Nora Perrone-Bizzozero; Jonathan L Brigman; Nikolaos Mellios
Journal:  Cell Rep       Date:  2022-01-18       Impact factor: 9.995

Review 8.  Circular RNA in Schizophrenia and Depression.

Authors:  Zexuan Li; Sha Liu; Xinrong Li; Wentao Zhao; Jing Li; Yong Xu
Journal:  Front Psychiatry       Date:  2020-05-07       Impact factor: 4.157

9.  Schizophrenia-associated MicroRNA-Gene Interactions in the Dorsolateral Prefrontal Cortex.

Authors:  Danielle M Santarelli; Adam P Carroll; Heath M Cairns; Paul A Tooney; Murray J Cairns
Journal:  Genomics Proteomics Bioinformatics       Date:  2020-02-14       Impact factor: 7.691

Review 10.  Multifaceted Regulation of MicroRNA Biogenesis: Essential Roles and Functional Integration in Neuronal and Glial Development.

Authors:  Izabela Suster; Yue Feng
Journal:  Int J Mol Sci       Date:  2021-06-23       Impact factor: 5.923

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