Literature DB >> 28090604

XQ-NLM: Denoising Diffusion MRI Data via x-q Space Non-Local Patch Matching.

Geng Chen1, Yafeng Wu2, Dinggang Shen3, Pew-Thian Yap3.   

Abstract

Noise is a major issue influencing quantitative analysis in diffusion MRI. The effects of noise can be reduced by repeated acquisitions, but this leads to long acquisition times that can be unrealistic in clinical settings. For this reason, post-acquisition denoising methods have been widely used to improve SNR. Among existing methods, non-local means (NLM) has been shown to produce good image quality with edge preservation. However, currently the application of NLM to diffusion MRI has been mostly focused on the spatial space (i.e., the x-space), despite the fact that diffusion data live in a combined space consisting of the x-space and the q-space (i.e., the space of wavevectors). In this paper, we propose to extend NLM to both x-space and q-space. We show how patch-matching, as required in NLM, can be performed concurrently in x-q space with the help of azimuthal equidistant projection and rotation invariant features. Extensive experiments on both synthetic and real data confirm that the proposed x-q space NLM (XQ-NLM) outperforms the classic NLM.

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Year:  2016        PMID: 28090604      PMCID: PMC5223578          DOI: 10.1007/978-3-319-46726-9_68

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  Two-dimensional polar harmonic transforms for invariant image representation.

Authors:  Pew-Thian Yap; Xudong Jiang; Alex Chichung Kot
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-07       Impact factor: 6.226

2.  Non-local means variants for denoising of diffusion-weighted and diffusion tensor MRI.

Authors:  Nicolas Wiest-Daesslé; Sylvain Prima; Pierrick Coupé; Sean Patrick Morrissey; Christian Barillot
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

3.  Impact of Rician adapted Non-Local Means filtering on HARDI.

Authors:  Maxime Descoteaux; Nicolas Wiest-Daesslé; Sylvain Prima; Christian Barillot; Rachid Deriche
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

4.  An optimized blockwise nonlocal means denoising filter for 3-D magnetic resonance images.

Authors:  P Coupe; P Yger; S Prima; P Hellier; C Kervrann; C Barillot
Journal:  IEEE Trans Med Imaging       Date:  2008-04       Impact factor: 10.048

5.  MRI denoising using non-local means.

Authors:  José V Manjón; José Carbonell-Caballero; Juan J Lull; Gracián García-Martí; Luís Martí-Bonmatí; Montserrat Robles
Journal:  Med Image Anal       Date:  2008-02-29       Impact factor: 8.545

6.  A signal transformational framework for breaking the noise floor and its applications in MRI.

Authors:  Cheng Guan Koay; Evren Ozarslan; Peter J Basser
Journal:  J Magn Reson       Date:  2008-12-06       Impact factor: 2.229

7.  Denoising Magnetic Resonance Images Using Collaborative Non-Local Means.

Authors:  Geng Chen; Pei Zhang; Yafeng Wu; Dinggang Shen; Pew-Thian Yap
Journal:  Neurocomputing       Date:  2016-02-12       Impact factor: 5.719

  7 in total
  7 in total

1.  Neighborhood Matching for Curved Domains with Application to Denoising in Diffusion MRI.

Authors:  Geng Chen; Bin Dong; Yong Zhang; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

2.  q-Space Upsampling Using x-q Space Regularization.

Authors:  Geng Chen; Bin Dong; Yong Zhang; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

3.  The impact of position-orientation adaptive smoothing in diffusion weighted imaging-From diffusion metrics to fiber tractography.

Authors:  Jia Yang; Barbara Carl; Christopher Nimsky; Miriam H A Bopp
Journal:  PLoS One       Date:  2020-05-20       Impact factor: 3.240

4.  Denoising Diffusion MRI via Graph Total Variance in Spatioangular Domain.

Authors:  Haiyong Wu; Senlin Yan
Journal:  Comput Math Methods Med       Date:  2021-12-07       Impact factor: 2.238

5.  Noise reduction in diffusion MRI using non-local self-similar information in joint x-q space.

Authors:  Geng Chen; Yafeng Wu; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Anal       Date:  2019-01-21       Impact factor: 13.828

6.  Robust Fusion of Diffusion MRI Data for Template Construction.

Authors:  Zhanlong Yang; Geng Chen; Dinggang Shen; Pew-Thian Yap
Journal:  Sci Rep       Date:  2017-10-11       Impact factor: 4.379

7.  Angular Upsampling in Infant Diffusion MRI Using Neighborhood Matching in x-q Space.

Authors:  Geng Chen; Bin Dong; Yong Zhang; Weili Lin; Dinggang Shen; Pew-Thian Yap
Journal:  Front Neuroinform       Date:  2018-09-07       Impact factor: 4.081

  7 in total

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