Literature DB >> 28088480

Sensing Membrane Curvature in Macroautophagy.

Nathan Nguyen1, Vladimir Shteyn2, Thomas J Melia3.   

Abstract

In response to intracellular stress events ranging from starvation to pathogen invasion, the cell activates one or more forms of macroautophagy. The key event in these related pathways is the de novo formation of a new organelle called the autophagosome, which either surrounds and sequesters random portions of the cytoplasm or selectively targets individual intracellular challenges. Thus, the autophagosome is a flexible membrane platform with dimensions that ultimately depend upon the target cargo. The intermediate membrane, termed the phagophore or isolation membrane, is a cup-like structure with a clear concave face and a highly curved rim. The phagophore is largely devoid of integral membrane proteins; thus, its shape and size are governed by peripherally associated membrane proteins and possibly by the lipid composition of the membrane itself. Growth along the phagophore rim marks the progress of both organelle expansion and ultimately organelle closure around a particular cargo. These two properties, a reliance on peripheral membrane proteins and a structurally distinct membrane architecture, suggest that the ability to target or manipulate membrane curvature might be an essential activity of proteins functioning in this pathway. In this review, we discuss the extent to which membranes are naturally curved at each of the cellular sites believed to engage in autophagosome formation, review basic mechanisms used to sense this curvature, and then summarize the existing literature concerning which autophagy proteins are capable of curvature recognition.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  BAR domain; amphipathic helix; membrane curvature; reticulon domain

Mesh:

Substances:

Year:  2017        PMID: 28088480      PMCID: PMC5276735          DOI: 10.1016/j.jmb.2017.01.006

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  107 in total

1.  A model for the packing of lipids in bilayer membranes.

Authors:  J N Israelachvili; D J Mitchell
Journal:  Biochim Biophys Acta       Date:  1975-04-21

2.  Architecture of the Atg17 complex as a scaffold for autophagosome biogenesis.

Authors:  Michael J Ragusa; Robin E Stanley; James H Hurley
Journal:  Cell       Date:  2012-12-06       Impact factor: 41.582

3.  Role of membrane association and Atg14-dependent phosphorylation in beclin-1-mediated autophagy.

Authors:  Adam I Fogel; Brian J Dlouhy; Chunxin Wang; Seung-Wook Ryu; Albert Neutzner; Samuel A Hasson; Dionisia P Sideris; Hagai Abeliovich; Richard J Youle
Journal:  Mol Cell Biol       Date:  2013-07-22       Impact factor: 4.272

4.  The Legionella effector RavZ inhibits host autophagy through irreversible Atg8 deconjugation.

Authors:  Augustine Choy; Julia Dancourt; Brian Mugo; Tamara J O'Connor; Ralph R Isberg; Thomas J Melia; Craig R Roy
Journal:  Science       Date:  2012-10-25       Impact factor: 47.728

5.  Crystal structure and biochemical analyses reveal Beclin 1 as a novel membrane binding protein.

Authors:  Weijiao Huang; Wooyoung Choi; Wanqiu Hu; Na Mi; Qiang Guo; Meisheng Ma; Mei Liu; Yuan Tian; Peilong Lu; Feng-Liang Wang; Haiteng Deng; Lei Liu; Ning Gao; Li Yu; Yigong Shi
Journal:  Cell Res       Date:  2012-02-07       Impact factor: 25.617

6.  Mitochondrial Rab GAPs govern autophagosome biogenesis during mitophagy.

Authors:  Koji Yamano; Adam I Fogel; Chunxin Wang; Alexander M van der Bliek; Richard J Youle
Journal:  Elife       Date:  2014-02-25       Impact factor: 8.140

7.  Freeze-fracture replica immunolabelling reveals human WIPI-1 and WIPI-2 as membrane proteins of autophagosomes.

Authors:  Tassula Proikas-Cezanne; Horst Robenek
Journal:  J Cell Mol Med       Date:  2011-09       Impact factor: 5.310

8.  TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic.

Authors:  Christopher A Lamb; Stefanie Nühlen; Delphine Judith; David Frith; Ambrosius P Snijders; Christian Behrends; Sharon A Tooze
Journal:  EMBO J       Date:  2015-12-28       Impact factor: 11.598

9.  Mechanism and functions of membrane binding by the Atg5-Atg12/Atg16 complex during autophagosome formation.

Authors:  Julia Romanov; Marta Walczak; Iosune Ibiricu; Stefan Schüchner; Egon Ogris; Claudine Kraft; Sascha Martens
Journal:  EMBO J       Date:  2012-10-12       Impact factor: 11.598

10.  Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy.

Authors:  Chinatsu Otomo; Zoltan Metlagel; Giichi Takaesu; Takanori Otomo
Journal:  Nat Struct Mol Biol       Date:  2012-12-02       Impact factor: 15.369

View more
  20 in total

1.  Autophagosome biogenesis: From membrane growth to closure.

Authors:  Thomas J Melia; Alf H Lystad; Anne Simonsen
Journal:  J Cell Biol       Date:  2020-06-01       Impact factor: 10.539

Review 2.  The Unsolved Problem of How Cells Sense Micron-Scale Curvature.

Authors:  Kevin S Cannon; Benjamin L Woods; Amy S Gladfelter
Journal:  Trends Biochem Sci       Date:  2017-10-28       Impact factor: 13.807

3.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

Review 4.  Mechanisms governing autophagosome biogenesis.

Authors:  Hitoshi Nakatogawa
Journal:  Nat Rev Mol Cell Biol       Date:  2020-05-05       Impact factor: 94.444

Review 5.  The coordination of membrane fission and fusion at the end of autophagosome maturation.

Authors:  Shenliang Yu; Thomas J Melia
Journal:  Curr Opin Cell Biol       Date:  2017-04-29       Impact factor: 8.382

Review 6.  Self-assemblies of Rab- and Arf-family small GTPases on lipid bilayers in membrane tethering.

Authors:  Joji Mima
Journal:  Biophys Rev       Date:  2021-07-12

7.  Quantitative Models of Lipid Transfer and Membrane Contact Formation.

Authors:  Yongli Zhang; Jinghua Ge; Xin Bian; Avinash Kumar
Journal:  Contact (Thousand Oaks)       Date:  2022-05-04

8.  Delipidation of mammalian Atg8-family proteins by each of the four ATG4 proteases.

Authors:  Karlina J Kauffman; Shenliang Yu; Jiaxin Jin; Brian Mugo; Nathan Nguyen; Aidan O'Brien; Shanta Nag; Alf Håkon Lystad; Thomas J Melia
Journal:  Autophagy       Date:  2018-04-10       Impact factor: 16.016

9.  Curvature-sensitive trans-assembly of human Atg8-family proteins in autophagy-related membrane tethering.

Authors:  Saki Taniguchi; Masayuki Toyoshima; Tomoyo Takamatsu; Joji Mima
Journal:  Protein Sci       Date:  2020-01-28       Impact factor: 6.725

Review 10.  How Lipids Contribute to Autophagosome Biogenesis, a Critical Process in Plant Responses to Stresses.

Authors:  Rodrigo Enrique Gomez; Josselin Lupette; Clément Chambaud; Julie Castets; Amélie Ducloy; Jean-Luc Cacas; Céline Masclaux-Daubresse; Amélie Bernard
Journal:  Cells       Date:  2021-05-21       Impact factor: 6.600

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.