Literature DB >> 32357219

Autophagosome biogenesis: From membrane growth to closure.

Thomas J Melia1, Alf H Lystad2, Anne Simonsen2.   

Abstract

Autophagosome biogenesis involves de novo formation of a membrane that elongates to sequester cytoplasmic cargo and closes to form a double-membrane vesicle (an autophagosome). This process has remained enigmatic since its initial discovery >50 yr ago, but our understanding of the mechanisms involved in autophagosome biogenesis has increased substantially during the last 20 yr. Several key questions do remain open, however, including, What determines the site of autophagosome nucleation? What is the origin and lipid composition of the autophagosome membrane? How is cargo sequestration regulated under nonselective and selective types of autophagy? This review provides key insight into the core molecular mechanisms underlying autophagosome biogenesis, with a specific emphasis on membrane modeling events, and highlights recent conceptual advances in the field.
© 2020 Melia et al.

Entities:  

Year:  2020        PMID: 32357219      PMCID: PMC7265318          DOI: 10.1083/jcb.202002085

Source DB:  PubMed          Journal:  J Cell Biol        ISSN: 0021-9525            Impact factor:   10.539


  204 in total

1.  AP1 is essential for generation of autophagosomes from the trans-Golgi network.

Authors:  Yajuan Guo; Chunmei Chang; Rui Huang; Bo Liu; Lan Bao; Wei Liu
Journal:  J Cell Sci       Date:  2012-02-10       Impact factor: 5.285

2.  Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomes.

Authors:  Andrew R J Young; Edmond Y W Chan; Xiao Wen Hu; Robert Köchl; Samuel G Crawshaw; Stephen High; Dale W Hailey; Jennifer Lippincott-Schwartz; Sharon A Tooze
Journal:  J Cell Sci       Date:  2006-08-29       Impact factor: 5.285

3.  The EM structure of the TRAPPIII complex leads to the identification of a requirement for COPII vesicles on the macroautophagy pathway.

Authors:  Dongyan Tan; Yiying Cai; Juan Wang; Jinzhong Zhang; Shekar Menon; Hui-Ting Chou; Susan Ferro-Novick; Karin M Reinisch; Thomas Walz
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

Review 4.  Mechanisms of Autophagy Initiation.

Authors:  James H Hurley; Lindsey N Young
Journal:  Annu Rev Biochem       Date:  2017-03-15       Impact factor: 23.643

5.  Modulation of local PtdIns3P levels by the PI phosphatase MTMR3 regulates constitutive autophagy.

Authors:  Naoko Taguchi-Atarashi; Maho Hamasaki; Kohichi Matsunaga; Hiroko Omori; Nicholas T Ktistakis; Tamotsu Yoshimori; Takeshi Noda
Journal:  Traffic       Date:  2010-01-06       Impact factor: 6.215

6.  Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae.

Authors:  M Tsukada; Y Ohsumi
Journal:  FEBS Lett       Date:  1993-10-25       Impact factor: 4.124

7.  The ULK1 complex mediates MTORC1 signaling to the autophagy initiation machinery via binding and phosphorylating ATG14.

Authors:  Ji-Man Park; Chang Hwa Jung; Minchul Seo; Neil Michael Otto; Douglas Grunwald; Kwan Hyun Kim; Branden Moriarity; Young-Mi Kim; Colby Starker; Richard Seonghun Nho; Daniel Voytas; Do-Hyung Kim
Journal:  Autophagy       Date:  2016       Impact factor: 16.016

8.  Dynamic and transient interactions of Atg9 with autophagosomes, but not membrane integration, are required for autophagy.

Authors:  A Orsi; M Razi; H C Dooley; D Robinson; A E Weston; L M Collinson; S A Tooze
Journal:  Mol Biol Cell       Date:  2012-03-28       Impact factor: 4.138

9.  SNX18 regulates ATG9A trafficking from recycling endosomes by recruiting Dynamin-2.

Authors:  Kristiane Søreng; Michael J Munson; Christopher A Lamb; Gunnveig T Bjørndal; Serhiy Pankiv; Sven R Carlsson; Sharon A Tooze; Anne Simonsen
Journal:  EMBO Rep       Date:  2018-02-07       Impact factor: 9.071

10.  WIPI3 and WIPI4 β-propellers are scaffolds for LKB1-AMPK-TSC signalling circuits in the control of autophagy.

Authors:  Daniela Bakula; Amelie J Müller; Theresia Zuleger; Zsuzsanna Takacs; Mirita Franz-Wachtel; Ann-Katrin Thost; Daniel Brigger; Mario P Tschan; Tancred Frickey; Horst Robenek; Boris Macek; Tassula Proikas-Cezanne
Journal:  Nat Commun       Date:  2017-05-31       Impact factor: 14.919

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  55 in total

1.  STING induces LC3B lipidation onto single-membrane vesicles via the V-ATPase and ATG16L1-WD40 domain.

Authors:  Tara D Fischer; Chunxin Wang; Benjamin S Padman; Michael Lazarou; Richard J Youle
Journal:  J Cell Biol       Date:  2020-12-07       Impact factor: 10.539

Review 2.  The role of autophagy in death of cardiomyocytes.

Authors:  Shohei Ikeda; Daniela Zablocki; Junichi Sadoshima
Journal:  J Mol Cell Cardiol       Date:  2021-12-14       Impact factor: 5.000

3.  Mammalian hybrid pre-autophagosomal structure HyPAS generates autophagosomes.

Authors:  Suresh Kumar; Ruheena Javed; Michal Mudd; Sandeep Pallikkuth; Keith A Lidke; Ashish Jain; Karthikeyan Tangavelou; Sigurdur Runar Gudmundsson; Chunyan Ye; Tor Erik Rusten; Jan Haug Anonsen; Alf Håkon Lystad; Aurore Claude-Taupin; Anne Simonsen; Michelle Salemi; Brett Phinney; Jing Li; Lian-Wang Guo; Steven B Bradfute; Graham S Timmins; Eeva-Liisa Eskelinen; Vojo Deretic
Journal:  Cell       Date:  2021-11-05       Impact factor: 41.582

Review 4.  Autophagosome biogenesis comes out of the black box.

Authors:  Chunmei Chang; Liv E Jensen; James H Hurley
Journal:  Nat Cell Biol       Date:  2021-04-26       Impact factor: 28.824

Review 5.  Mechanobiology of Autophagy: The Unexplored Side of Cancer.

Authors:  Maria Paz Hernández-Cáceres; Leslie Munoz; Javiera M Pradenas; Francisco Pena; Pablo Lagos; Pablo Aceiton; Gareth I Owen; Eugenia Morselli; Alfredo Criollo; Andrea Ravasio; Cristina Bertocchi
Journal:  Front Oncol       Date:  2021-02-26       Impact factor: 6.244

Review 6.  Autophagy in inflammation, infection, and immunometabolism.

Authors:  Vojo Deretic
Journal:  Immunity       Date:  2021-03-09       Impact factor: 31.745

Review 7.  Towards a better understanding of the neuro-developmental role of autophagy in sickness and in health.

Authors:  Juan Zapata-Muñoz; Beatriz Villarejo-Zori; Pablo Largo-Barrientos; Patricia Boya
Journal:  Cell Stress       Date:  2021-06-29

Review 8.  How Lipids Contribute to Autophagosome Biogenesis, a Critical Process in Plant Responses to Stresses.

Authors:  Rodrigo Enrique Gomez; Josselin Lupette; Clément Chambaud; Julie Castets; Amélie Ducloy; Jean-Luc Cacas; Céline Masclaux-Daubresse; Amélie Bernard
Journal:  Cells       Date:  2021-05-21       Impact factor: 6.600

Review 9.  Recent Advances in the Roles of Autophagy and Autophagy Proteins in Host Cells During Toxoplasma gondii Infection and Potential Therapeutic Implications.

Authors:  Carlos S Subauste
Journal:  Front Cell Dev Biol       Date:  2021-06-09

Review 10.  Lipids and membrane-associated proteins in autophagy.

Authors:  Linsen Li; Mindan Tong; Yuhui Fu; Fang Chen; Shen Zhang; Hanmo Chen; Xi Ma; Defa Li; Xiaoxia Liu; Qing Zhong
Journal:  Protein Cell       Date:  2020-11-05       Impact factor: 14.870

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