Literature DB >> 31960529

Curvature-sensitive trans-assembly of human Atg8-family proteins in autophagy-related membrane tethering.

Saki Taniguchi1, Masayuki Toyoshima1, Tomoyo Takamatsu1, Joji Mima1.   

Abstract

In macroautophagy, de novo formation of the double membrane-bound organelles, termed autophagosomes, is essential for engulfing and sequestering the cytoplasmic contents to be degraded in the lytic compartments such as vacuoles and lysosomes. Atg8-family proteins have been known to be responsible for autophagosome formation via membrane tethering and fusion events of precursor membrane structures. Nevertheless, how Atg8 proteins act directly upon autophagosome formation still remains enigmatic. Here, to further gain molecular insights into Atg8-mediated autophagic membrane dynamics, we study the two representative human Atg8 orthologs, LC3B and GATE-16, by quantitatively evaluating their intrinsic potency to physically tether lipid membranes in a chemically defined reconstitution system using purified Atg8 proteins and synthetic liposomes. Both LC3B and GATE-16 retained the capacities to trigger efficient membrane tethering at the protein-to-lipid molar ratios ranging from 1:100 to 1:5,000. These human Atg8-mediated membrane-tethering reactions require trans-assembly between the membrane-anchored forms of LC3B and GATE-16 and can be reversibly and strictly controlled by the membrane attachment and detachment cycles. Strikingly, we further uncovered distinct membrane curvature dependences of LC3B- and GATE-16-mediated membrane tethering reactions: LC3B can drive tethering more efficiently than GATE-16 for highly curved small vesicles (e.g., 50 nm in diameter), although GATE-16 turns out to be a more potent tether than LC3B for flatter large vesicles (e.g., 200 and 400 nm in diameter). Our findings establish curvature-sensitive trans-assembly of human Atg8-family proteins in reconstituted membrane tethering, which recapitulates an essential subreaction of the biogenesis of autophagosomes in vivo.
© 2020 The Protein Society.

Entities:  

Keywords:  Atg8; GATE-16; LC3B; autophagosome; autophagy; membrane reconstitution; membrane tethering

Mesh:

Substances:

Year:  2020        PMID: 31960529      PMCID: PMC7255505          DOI: 10.1002/pro.3828

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  53 in total

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Journal:  J Cell Sci       Date:  2011-01-01       Impact factor: 5.285

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Journal:  Cell       Date:  2007-07-13       Impact factor: 41.582

3.  A ubiquitin-like system mediates protein lipidation.

Authors:  Y Ichimura; T Kirisako; T Takao; Y Satomi; Y Shimonishi; N Ishihara; N Mizushima; I Tanida; E Kominami; M Ohsumi; T Noda; Y Ohsumi
Journal:  Nature       Date:  2000-11-23       Impact factor: 49.962

4.  Human Rab small GTPase- and class V myosin-mediated membrane tethering in a chemically defined reconstitution system.

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Journal:  J Biol Chem       Date:  2017-09-22       Impact factor: 5.157

5.  SNARE proteins are required for macroautophagy.

Authors:  Usha Nair; Anjali Jotwani; Jiefei Geng; Noor Gammoh; Diana Richerson; Wei-Lien Yen; Janice Griffith; Shanta Nag; Ke Wang; Tyler Moss; Misuzu Baba; James A McNew; Xuejun Jiang; Fulvio Reggiori; Thomas J Melia; Daniel J Klionsky
Journal:  Cell       Date:  2011-07-22       Impact factor: 41.582

6.  The Atg8 conjugation system is indispensable for proper development of autophagic isolation membranes in mice.

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Journal:  Mol Biol Cell       Date:  2008-09-03       Impact factor: 4.138

Review 7.  Phospholipid subcellular localization and dynamics.

Authors:  Yanbo Yang; Minhyoung Lee; Gregory D Fairn
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Review 8.  Phospholipid synthesis and transport in mammalian cells.

Authors:  Jean E Vance
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Authors:  Roland L Knorr; Hitoshi Nakatogawa; Yoshinori Ohsumi; Reinhard Lipowsky; Tobias Baumgart; Rumiana Dimova
Journal:  PLoS One       Date:  2014-12-18       Impact factor: 3.240

10.  Lipidation of the LC3/GABARAP family of autophagy proteins relies on a membrane-curvature-sensing domain in Atg3.

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Review 1.  Atg8-PE protein-based in vitro biochemical approaches to autophagy studies.

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2.  Curvature-sensitive trans-assembly of human Atg8-family proteins in autophagy-related membrane tethering.

Authors:  Saki Taniguchi; Masayuki Toyoshima; Tomoyo Takamatsu; Joji Mima
Journal:  Protein Sci       Date:  2020-01-28       Impact factor: 6.725

3.  Lipid profiles of autophagic structures isolated from wild type and Atg2 mutant Drosophila.

Authors:  Hajnalka Laczkó-Dobos; Asha Kiran Maddali; András Jipa; Arindam Bhattacharjee; Attila Gergely Végh; Gábor Juhász
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2020-12-15       Impact factor: 4.698

4.  The Small GTPase Arf6 Functions as a Membrane Tether in a Chemically-Defined Reconstitution System.

Authors:  Kana Fujibayashi; Joji Mima
Journal:  Front Cell Dev Biol       Date:  2021-01-28

Review 5.  Activation Mechanisms of the VPS34 Complexes.

Authors:  Yohei Ohashi
Journal:  Cells       Date:  2021-11-11       Impact factor: 7.666

Review 6.  Activation and targeting of ATG8 protein lipidation.

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  6 in total

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