Literature DB >> 28083569

Riemannian Metric Optimization for Connectivity-driven Surface Mapping.

Jin Kyu Gahm1, Yonggang Shi1.   

Abstract

With the advance of human connectome research, there are great interests in computing diffeomorphic maps of brain surfaces with rich connectivity features. In this paper, we propose a novel framework for connectivity-driven surface mapping based on Riemannian metric optimization on surfaces (RMOS) in the Laplace-Beltrami (LB) embedding space. The mathematical foundation of our method is that we can use the pullback metric to define an isometry between surfaces for an arbitrary diffeomorphism, which in turn results in identical LB embeddings from the two surfaces. For connectivity-driven surface mapping, our goal is to compute a diffeomorphism that can match a set of connectivity features defined over anatomical surfaces. The proposed RMOS approach achieves this goal by iteratively optimizing the Riemannian metric on surfaces to match the connectivity features in the LB embedding space. At the core of our framework is an optimization approach that converts the cost function of connectivity features into a distance measure in the LB embedding space, and optimizes it using gradients of the LB eigen-system with respect to the Riemannian metric. We demonstrate our method on the mapping of thalamic surfaces according to connectivity to ten cortical regions, which we compute with the multi-shell diffusion imaging data from the Human Connectome Project (HCP). Comparisons with a state-of-the-art method show that the RMOS method can more effectively match anatomical features and detect thalamic atrophy due to normal aging.

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Year:  2016        PMID: 28083569      PMCID: PMC5223768          DOI: 10.1007/978-3-319-46720-7_27

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  9 in total

1.  Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging.

Authors:  T E J Behrens; H Johansen-Berg; M W Woolrich; S M Smith; C A M Wheeler-Kingshott; P A Boulby; G J Barker; E L Sillery; K Sheehan; O Ciccarelli; A J Thompson; J M Brady; P M Matthews
Journal:  Nat Neurosci       Date:  2003-07       Impact factor: 24.884

2.  Metric optimization for surface analysis in the Laplace-Beltrami embedding space.

Authors:  Yonggang Shi; Rongjie Lai; Danny J J Wang; Daniel Pelletier; David Mohr; Nancy Sicotte; Arthur W Toga
Journal:  IEEE Trans Med Imaging       Date:  2014-03-25       Impact factor: 10.048

3.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

4.  Diffeomorphic spectral matching of cortical surfaces.

Authors:  Herve Lombaert; Jon Sporring; Kaleem Siddiqi
Journal:  Inf Process Med Imaging       Date:  2013

5.  Fiber Orientation and Compartment Parameter Estimation From Multi-Shell Diffusion Imaging.

Authors:  Giang Tran; Yonggang Shi
Journal:  IEEE Trans Med Imaging       Date:  2015-05-07       Impact factor: 10.048

6.  Anatomy-guided Dense Individualized and Common Connectivity-based Cortical Landmarks (A-DICCCOL).

Authors:  Xi Jiang; Tuo Zhang; Dajiang Zhu; Kaiming Li; Hanbo Chen; Jinglei Lv; Xintao Hu; Junwei Han; Dinggang Shen; Lei Guo; Tianming Liu
Journal:  IEEE Trans Biomed Eng       Date:  2014-11-20       Impact factor: 4.538

7.  Registering cortical surfaces based on whole-brain structural connectivity and continuous connectivity analysis.

Authors:  Boris Gutman; Cassandra Leonardo; Neda Jahanshad; Derrek Hibar; Kristian Eschenburg; Talia Nir; Julio Villalon; Paul Thompson
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

8.  Mapping hippocampal and ventricular change in Alzheimer disease.

Authors:  Paul M Thompson; Kiralee M Hayashi; Greig I De Zubicaray; Andrew L Janke; Stephen E Rose; James Semple; Michael S Hong; David H Herman; David Gravano; David M Doddrell; Arthur W Toga
Journal:  Neuroimage       Date:  2004-08       Impact factor: 6.556

Review 9.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

  9 in total
  3 in total

1.  Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space.

Authors:  Jin Kyu Gahm; Yonggang Shi
Journal:  Med Image Anal       Date:  2018-03-16       Impact factor: 8.545

2.  Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space.

Authors:  Jin Kyu Gahm; Yonggang Shi
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

3.  Topological false discovery rates for brain mapping based on signal height.

Authors:  Junning Li; Jin Kyu Gahm; Yonggang Shi; Arthur W Toga
Journal:  Neuroimage       Date:  2016-11-10       Impact factor: 6.556

  3 in total

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