Literature DB >> 28074886

Post-mortem whole-exome analysis in a large sudden infant death syndrome cohort with a focus on cardiovascular and metabolic genetic diseases.

Jacqueline Neubauer1, Maria Rita Lecca2, Giancarlo Russo2, Christine Bartsch3, Argelia Medeiros-Domingo4, Wolfgang Berger5,6,7, Cordula Haas1.   

Abstract

Sudden infant death syndrome (SIDS) is described as the sudden and unexplained death of an apparently healthy infant younger than one year of age. Genetic studies indicate that up to 35% of SIDS cases might be explained by familial or genetic diseases such as cardiomyopathies, ion channelopathies or metabolic disorders that remained undetected during conventional forensic autopsy procedures. Post-mortem genetic testing by using massive parallel sequencing (MPS) approaches represents an efficient and rapid tool to further investigate unexplained death cases and might help to elucidate pathogenic genetic variants and mechanisms in cases without a conclusive cause of death. In this study, we performed whole-exome sequencing (WES) in 161 European SIDS infants with focus on 192 genes associated with cardiovascular and metabolic diseases. Potentially causative variants were detected in 20% of the SIDS cases. The majority of infants had variants with likely functional effects in genes associated with channelopathies (9%), followed by cardiomyopathies (7%) and metabolic diseases (1%). Although lethal arrhythmia represents the most plausible and likely cause of death, the majority of SIDS cases still remains elusive and might be explained by a multifactorial etiology, triggered by a combination of different genetic and environmental risk factors. As WES is not substantially more expensive than a targeted sequencing approach, it represents an unbiased screening of the exome, which could help to investigate different pathogenic mechanisms within the genetically heterogeneous SIDS cohort. Additionally, re-analysis of the datasets provides the basis to identify new candidate genes in sudden infant death.

Entities:  

Mesh:

Year:  2017        PMID: 28074886      PMCID: PMC5386419          DOI: 10.1038/ejhg.2016.199

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  39 in total

1.  Broad-based molecular autopsy: a potential tool to investigate the involvement of subtle cardiac conditions in sudden unexpected death in infancy and early childhood.

Authors:  Montserrat Santori; Alejandro Blanco-Verea; Rocio Gil; Judith Cortis; Katrin Becker; Peter M Schneider; Angel Carracedo; Maria Brion
Journal:  Arch Dis Child       Date:  2015-08-13       Impact factor: 3.791

2.  Confirmation of cause and manner of death via a comprehensive cardiac autopsy including whole exome next-generation sequencing.

Authors:  Christina G Loporcaro; David J Tester; Joseph J Maleszewski; Teresa Kruisselbrink; Michael J Ackerman
Journal:  Arch Pathol Lab Med       Date:  2013-12-03       Impact factor: 5.534

3.  Genetics of the sudden infant death syndrome.

Authors:  Cornelius Courts; Burkhard Madea
Journal:  Forensic Sci Int       Date:  2010-08-02       Impact factor: 2.395

Review 4.  Gene variants predisposing to SIDS: current knowledge.

Authors:  Siri H Opdal; Torleiv O Rognum
Journal:  Forensic Sci Med Pathol       Date:  2010-07-11       Impact factor: 2.007

5.  Postmortem stability of DNA.

Authors:  W Bär; A Kratzer; M Mächler; W Schmid
Journal:  Forensic Sci Int       Date:  1988-10       Impact factor: 2.395

6.  Contemporary definitions and classification of the cardiomyopathies: an American Heart Association Scientific Statement from the Council on Clinical Cardiology, Heart Failure and Transplantation Committee; Quality of Care and Outcomes Research and Functional Genomics and Translational Biology Interdisciplinary Working Groups; and Council on Epidemiology and Prevention.

Authors:  Barry J Maron; Jeffrey A Towbin; Gaetano Thiene; Charles Antzelevitch; Domenico Corrado; Donna Arnett; Arthur J Moss; Christine E Seidman; James B Young
Journal:  Circulation       Date:  2006-03-27       Impact factor: 29.690

7.  Identification and characterization of two ankyrin-B isoforms in mammalian heart.

Authors:  Henry C Wu; Gokay Yamankurt; JiaLie Luo; Janani Subramaniam; Syed Shahrukh Hashmi; Hongzhen Hu; Shane R Cunha
Journal:  Cardiovasc Res       Date:  2015-06-24       Impact factor: 10.787

8.  A perspective on neuropathologic findings in victims of the sudden infant death syndrome: the triple-risk model.

Authors:  J J Filiano; H C Kinney
Journal:  Biol Neonate       Date:  1994

9.  Post-mortem whole-exome sequencing (WES) with a focus on cardiac disease-associated genes in five young sudden unexplained death (SUD) cases.

Authors:  Jacqueline Neubauer; Cordula Haas; Christine Bartsch; Argelia Medeiros-Domingo; Wolfgang Berger
Journal:  Int J Legal Med       Date:  2016-02-04       Impact factor: 2.686

Review 10.  The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine.

Authors:  Peter D Stenson; Matthew Mort; Edward V Ball; Katy Shaw; Andrew Phillips; David N Cooper
Journal:  Hum Genet       Date:  2014-01       Impact factor: 4.132

View more
  32 in total

Review 1.  Molecular genetic diagnostics for ventricular arrhythmias and sudden cardiac death syndromes.

Authors:  B Stallmeyer; S Dittmann; G Seebohm; J Müller; E Schulze-Bahr
Journal:  Herz       Date:  2017-08       Impact factor: 1.443

2.  Feasibility of analysis of the SCN5A gene in paraffin embedded samples in sudden infant death cases at the Pretoria Medico-Legal Laboratory, South Africa.

Authors:  Barbara Ströh van Deventer; Lorraine du Toit-Prinsloo; Chantal van Niekerk
Journal:  Forensic Sci Med Pathol       Date:  2018-06-16       Impact factor: 2.007

Review 3.  [Genetic testing to prevent sudden cardiac death].

Authors:  B Stallmeyer; S Dittmann; E Schulze-Bahr
Journal:  Internist (Berl)       Date:  2018-08       Impact factor: 0.743

Review 4.  A Systematic Review of Molecular Autopsy Studies in Sudden Infant Death Cases.

Authors:  Laura Jane Heathfield; Lorna Jean Martin; Raj Ramesar
Journal:  J Pediatr Genet       Date:  2018-08-18

5.  Multiallelic rare variants support an oligogenic origin of sudden cardiac death in the young.

Authors:  Hager Jaouadi; Yosra Bouyacoub; Sonia Chabrak; Lilia Kraoua; Amira Zaroui; Sahar Elouej; Majdi Nagara; Hamza Dallali; Valérie Delague; Nicolas Levy; Rym Benkhalifa; Rachid Mechmeche; Stéphane Zaffran; Sonia Abdelhak
Journal:  Herz       Date:  2020-01-22       Impact factor: 1.443

6.  Reappraisal of variants previously linked with sudden infant death syndrome: results from three population-based cohorts.

Authors:  Christian Paludan-Müller; Jonas Ghouse; Oliver B Vad; Cecilie B Herfelt; Pia Lundegaard; Gustav Ahlberg; Nicole Schmitt; Jesper H Svendsen; Stig Haunsø; Henning Bundgaard; Torben Hansen; Jørgen K Kanters; Morten S Olesen
Journal:  Eur J Hum Genet       Date:  2019-05-01       Impact factor: 4.246

7.  Whole genome and transcriptome sequencing of post-mortem cardiac tissues from sudden cardiac death victims identifies a gene regulatory variant in NEXN.

Authors:  Jeppe D Andersen; Stine B Jacobsen; Linea C Trudsø; Marie-Louise Kampmann; Jytte Banner; Niels Morling
Journal:  Int J Legal Med       Date:  2019-08-07       Impact factor: 2.686

8.  Causal Genetic Variants in Stillbirth.

Authors:  Kate E Stanley; Jessica Giordano; Vanessa Thorsten; Christie Buchovecky; Amanda Thomas; Mythily Ganapathi; Jun Liao; Avinash V Dharmadhikari; Anya Revah-Politi; Michelle Ernst; Natalie Lippa; Halie Holmes; Gundula Povysil; Joseph Hostyk; Corette B Parker; Robert Goldenberg; George R Saade; Donald J Dudley; Halit Pinar; Carol Hogue; Uma M Reddy; Robert M Silver; Vimla Aggarwal; Andrew S Allen; Ronald J Wapner; David B Goldstein
Journal:  N Engl J Med       Date:  2020-08-12       Impact factor: 91.245

9.  Explaining Sudden Unexpected Infant Deaths, 2011-2017.

Authors:  Sharyn E Parks; Alexa B Erck Lambert; Fern R Hauck; Carri R Cottengim; Meghan Faulkner; Carrie K Shapiro-Mendoza
Journal:  Pediatrics       Date:  2021-05       Impact factor: 7.124

Review 10.  Sudden infant death syndrome and inherited cardiac conditions.

Authors:  Alban-Elouen Baruteau; David J Tester; Jamie D Kapplinger; Michael J Ackerman; Elijah R Behr
Journal:  Nat Rev Cardiol       Date:  2017-09-07       Impact factor: 32.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.