Literature DB >> 28059770

A supramolecular assembly mediates lentiviral DNA integration.

Allison Ballandras-Colas1, Daniel P Maskell1, Erik Serrao2,3, Julia Locke4, Paolo Swuec4, Stefán R Jónsson5, Abhay Kotecha6, Nicola J Cook1, Valerie E Pye1, Ian A Taylor7, Valgerdur Andrésdóttir5, Alan N Engelman2,3, Alessandro Costa4, Peter Cherepanov1,8.   

Abstract

Retroviral integrase (IN) functions within the intasome nucleoprotein complex to catalyze insertion of viral DNA into cellular chromatin. Using cryo-electron microscopy, we now visualize the functional maedi-visna lentivirus intasome at 4.9 angstrom resolution. The intasome comprises a homo-hexadecamer of IN with a tetramer-of-tetramers architecture featuring eight structurally distinct types of IN protomers supporting two catalytically competent subunits. The conserved intasomal core, previously observed in simpler retroviral systems, is formed between two IN tetramers, with a pair of C-terminal domains from flanking tetramers completing the synaptic interface. Our results explain how HIV-1 IN, which self-associates into higher-order multimers, can form a functional intasome, reconcile the bulk of early HIV-1 IN biochemical and structural data, and provide a lentiviral platform for design of HIV-1 IN inhibitors.
Copyright © 2017, American Association for the Advancement of Science.

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Year:  2017        PMID: 28059770      PMCID: PMC5321526          DOI: 10.1126/science.aah7002

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  48 in total

1.  Zn2+ promotes the self-association of human immunodeficiency virus type-1 integrase in vitro.

Authors:  S P Lee; J Xiao; J R Knutson; M S Lewis; M K Han
Journal:  Biochemistry       Date:  1997-01-07       Impact factor: 3.162

2.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

3.  High resolution single particle refinement in EMAN2.1.

Authors:  James M Bell; Muyuan Chen; Philip R Baldwin; Steven J Ludtke
Journal:  Methods       Date:  2016-02-27       Impact factor: 3.608

4.  CTFFIND4: Fast and accurate defocus estimation from electron micrographs.

Authors:  Alexis Rohou; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2015-08-13       Impact factor: 2.867

5.  Decision making in xia2.

Authors:  Graeme Winter; Carina M C Lobley; Stephen M Prince
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-18

6.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

7.  Structural basis for retroviral integration into nucleosomes.

Authors:  Daniel P Maskell; Ludovic Renault; Erik Serrao; Paul Lesbats; Rishi Matadeen; Stephen Hare; Dirk Lindemann; Alan N Engelman; Alessandro Costa; Peter Cherepanov
Journal:  Nature       Date:  2015-06-10       Impact factor: 49.962

8.  Engineered hyperactive integrase for concerted HIV-1 DNA integration.

Authors:  Min Li; Kellie A Jurado; Shiqiang Lin; Alan Engelman; Robert Craigie
Journal:  PLoS One       Date:  2014-08-13       Impact factor: 3.240

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  59 in total

1.  NKNK: a New Essential Motif in the C-Terminal Domain of HIV-1 Group M Integrases.

Authors:  Marine Kanja; Pierre Cappy; Nicolas Levy; Oyndamola Oladosu; Sylvie Schmidt; Paola Rossolillo; Flore Winter; Romain Gasser; Christiane Moog; Marc Ruff; Matteo Negroni; Daniela Lener
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

2.  Structural biology: High-order integration.

Authors:  Ashley York
Journal:  Nat Rev Microbiol       Date:  2017-01-23       Impact factor: 60.633

Review 3.  Integration site selection by retroviruses and transposable elements in eukaryotes.

Authors:  Tania Sultana; Alessia Zamborlini; Gael Cristofari; Pascale Lesage
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

4.  Differential assembly of Rous sarcoma virus tetrameric and octameric intasomes is regulated by the C-terminal domain and tail region of integrase.

Authors:  Sibes Bera; Krishan K Pandey; Hideki Aihara; Duane P Grandgenett
Journal:  J Biol Chem       Date:  2018-09-05       Impact factor: 5.157

5.  A C-terminal "Tail" Region in the Rous Sarcoma Virus Integrase Provides High Plasticity of Functional Integrase Oligomerization during Intasome Assembly.

Authors:  Krishan K Pandey; Sibes Bera; Ke Shi; Hideki Aihara; Duane P Grandgenett
Journal:  J Biol Chem       Date:  2017-02-08       Impact factor: 5.157

Review 6.  Multifaceted HIV integrase functionalities and therapeutic strategies for their inhibition.

Authors:  Alan N Engelman
Journal:  J Biol Chem       Date:  2019-08-29       Impact factor: 5.157

7.  Allosteric HIV Integrase Inhibitors Promote Formation of Inactive Branched Polymers via Homomeric Carboxy-Terminal Domain Interactions.

Authors:  Kushol Gupta; Audrey Allen; Carolina Giraldo; Grant Eilers; Robert Sharp; Young Hwang; Hemma Murali; Katrina Cruz; Paul Janmey; Frederic Bushman; Gregory D Van Duyne
Journal:  Structure       Date:  2020-12-23       Impact factor: 5.006

8.  Structural basis for strand-transfer inhibitor binding to HIV intasomes.

Authors:  Dario Oliveira Passos; Min Li; Ilona K Jóźwik; Xue Zhi Zhao; Diogo Santos-Martins; Renbin Yang; Steven J Smith; Youngmin Jeon; Stefano Forli; Stephen H Hughes; Terrence R Burke; Robert Craigie; Dmitry Lyumkis
Journal:  Science       Date:  2020-01-30       Impact factor: 47.728

Review 9.  Structural Insights on Retroviral DNA Integration: Learning from Foamy Viruses.

Authors:  Ga-Eun Lee; Eric Mauro; Vincent Parissi; Cha-Gyun Shin; Paul Lesbats
Journal:  Viruses       Date:  2019-08-22       Impact factor: 5.048

10.  A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies.

Authors:  Min Li; Xuemin Chen; Huaibin Wang; Kellie A Jurado; Alan N Engelman; Robert Craigie
Journal:  J Mol Biol       Date:  2020-02-13       Impact factor: 5.469

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