Literature DB >> 32001521

Structural basis for strand-transfer inhibitor binding to HIV intasomes.

Dario Oliveira Passos1, Min Li2, Ilona K Jóźwik1, Xue Zhi Zhao3, Diogo Santos-Martins4, Renbin Yang2, Steven J Smith3, Youngmin Jeon1, Stefano Forli4, Stephen H Hughes3, Terrence R Burke3, Robert Craigie2, Dmitry Lyumkis5,4.   

Abstract

The HIV intasome is a large nucleoprotein assembly that mediates the integration of a DNA copy of the viral genome into host chromatin. Intasomes are targeted by the latest generation of antiretroviral drugs, integrase strand-transfer inhibitors (INSTIs). Challenges associated with lentiviral intasome biochemistry have hindered high-resolution structural studies of how INSTIs bind to their native drug target. Here, we present high-resolution cryo-electron microscopy structures of HIV intasomes bound to the latest generation of INSTIs. These structures highlight how small changes in the integrase active site can have notable implications for drug binding and design and provide mechanistic insights into why a leading INSTI retains efficacy against a broad spectrum of drug-resistant variants. The data have implications for expanding effective treatments available for HIV-infected individuals.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32001521      PMCID: PMC7357238          DOI: 10.1126/science.aay8015

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  48 in total

1.  2018 IAS-USA Recommendations for the Use of Antiretroviral Therapy for HIV: Building on Decades of Progress.

Authors:  James Riddell
Journal:  JAMA       Date:  2018-07-24       Impact factor: 56.272

2.  Structural and functional analyses of the second-generation integrase strand transfer inhibitor dolutegravir (S/GSK1349572).

Authors:  Stephen Hare; Steven J Smith; Mathieu Métifiot; Albert Jaxa-Chamiec; Yves Pommier; Stephen H Hughes; Peter Cherepanov
Journal:  Mol Pharmacol       Date:  2011-06-30       Impact factor: 4.436

Review 3.  Improving Viral Protease Inhibitors to Counter Drug Resistance.

Authors:  Nese Kurt Yilmaz; Ronald Swanstrom; Celia A Schiffer
Journal:  Trends Microbiol       Date:  2016-04-15       Impact factor: 17.079

4.  Appion: an integrated, database-driven pipeline to facilitate EM image processing.

Authors:  Gabriel C Lander; Scott M Stagg; Neil R Voss; Anchi Cheng; Denis Fellmann; James Pulokas; Craig Yoshioka; Christopher Irving; Anke Mulder; Pick-Wei Lau; Dmitry Lyumkis; Clinton S Potter; Bridget Carragher
Journal:  J Struct Biol       Date:  2009-04       Impact factor: 2.867

5.  Engineered hyperactive integrase for concerted HIV-1 DNA integration.

Authors:  Min Li; Kellie A Jurado; Shiqiang Lin; Alan Engelman; Robert Craigie
Journal:  PLoS One       Date:  2014-08-13       Impact factor: 3.240

6.  4-amino-1-hydroxy-2-oxo-1,8-naphthyridine-containing compounds having high potency against raltegravir-resistant integrase mutants of HIV-1.

Authors:  Xue Zhi Zhao; Steven J Smith; Mathieu Métifiot; Christophe Marchand; Paul L Boyer; Yves Pommier; Stephen H Hughes; Terrence R Burke
Journal:  J Med Chem       Date:  2014-06-16       Impact factor: 7.446

Review 7.  Retroviral DNA Integration.

Authors:  Paul Lesbats; Alan N Engelman; Peter Cherepanov
Journal:  Chem Rev       Date:  2016-05-20       Impact factor: 60.622

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

9.  Crystal structure of the Rous sarcoma virus intasome.

Authors:  Zhiqi Yin; Ke Shi; Surajit Banerjee; Krishan K Pandey; Sibes Bera; Duane P Grandgenett; Hideki Aihara
Journal:  Nature       Date:  2016-02-18       Impact factor: 49.962

10.  Measurement of atom resolvability in cryo-EM maps with Q-scores.

Authors:  Grigore Pintilie; Kaiming Zhang; Zhaoming Su; Shanshan Li; Michael F Schmid; Wah Chiu
Journal:  Nat Methods       Date:  2020-02-10       Impact factor: 28.547

View more
  22 in total

1.  HIV-1 Integrase Inhibitors That Are Active against Drug-Resistant Integrase Mutants.

Authors:  Steven J Smith; Xue Zhi Zhao; Dario Oliveira Passos; Dmitry Lyumkis; Terrence R Burke; Stephen H Hughes
Journal:  Antimicrob Agents Chemother       Date:  2020-08-20       Impact factor: 5.191

2.  Retroviral integrase: Structure, mechanism, and inhibition.

Authors:  Dario Oliveira Passos; Min Li; Robert Craigie; Dmitry Lyumkis
Journal:  Enzymes       Date:  2021-08-23

3.  Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance.

Authors:  Ala M Shaqra; Sarah N Zvornicanin; Qiu Yu J Huang; Gordon J Lockbaum; Mark Knapp; Laura Tandeske; David T Bakan; Julia Flynn; Daniel N A Bolon; Stephanie Moquin; Dustin Dovala; Nese Kurt Yilmaz; Celia A Schiffer
Journal:  Nat Commun       Date:  2022-06-21       Impact factor: 17.694

Review 4.  A clinical review of HIV integrase strand transfer inhibitors (INSTIs) for the prevention and treatment of HIV-1 infection.

Authors:  Alexa Vyain Zhao; Rustin D Crutchley; Rakesh Chowdary Guduru; Kathy Ton; Tammie Lam; Amy Cheng Min
Journal:  Retrovirology       Date:  2022-10-22       Impact factor: 3.768

Review 5.  Structure and function of retroviral integrase.

Authors:  Goedele N Maertens; Alan N Engelman; Peter Cherepanov
Journal:  Nat Rev Microbiol       Date:  2021-07-09       Impact factor: 60.633

Review 6.  Avoiding Drug Resistance in HIV Reverse Transcriptase.

Authors:  Maria E Cilento; Karen A Kirby; Stefan G Sarafianos
Journal:  Chem Rev       Date:  2021-01-28       Impact factor: 60.622

Review 7.  Drug Design Strategies to Avoid Resistance in Direct-Acting Antivirals and Beyond.

Authors:  Ashley N Matthew; Florian Leidner; Gordon J Lockbaum; Mina Henes; Jacqueto Zephyr; Shurong Hou; Desaboini Nageswara Rao; Jennifer Timm; Linah N Rusere; Debra A Ragland; Janet L Paulsen; Kristina Prachanronarong; Djade I Soumana; Ellen A Nalivaika; Nese Kurt Yilmaz; Akbar Ali; Celia A Schiffer
Journal:  Chem Rev       Date:  2021-01-07       Impact factor: 60.622

Review 8.  Close-up: HIV/SIV intasome structures shed new light on integrase inhibitor binding and viral escape mechanisms.

Authors:  Alan N Engelman; Peter Cherepanov
Journal:  FEBS J       Date:  2020-06-22       Impact factor: 5.542

Review 9.  Tools for visualizing and analyzing Fourier space sampling in Cryo-EM.

Authors:  Philip R Baldwin; Dmitry Lyumkis
Journal:  Prog Biophys Mol Biol       Date:  2020-07-06       Impact factor: 3.667

10.  Human Three Prime Repair Exonuclease 1 Promotes HIV-1 Integration by Preferentially Degrading Unprocessed Viral DNA.

Authors:  Benem-Orom Davids; Muthukumar Balasubramaniam; Nicklas Sapp; Prem Prakash; Shalonda Ingram; Min Li; Robert Craigie; Thomas Hollis; Jui Pandhare; Chandravanu Dash
Journal:  J Virol       Date:  2021-08-10       Impact factor: 5.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.