Jan Heyda1,2, Halil I Okur, Jana Hladílková3,4, Kelvin B Rembert, William Hunn5, Tinglu Yang, Joachim Dzubiella1,6, Pavel Jungwirth4, Paul S Cremer. 1. Institut für Weiche Materie und Funktionale Materialien, Helmholtz-Zentrum Berlin für Materialien und Energie , Hahn-Meitner Platz 1, 14109 Berlin, Germany. 2. Physical Chemistry Department, University of Chemistry and Technology, Prague , Technicka 5, 16628 Prague 6, Czech Republic. 3. Division of Theoretical Chemistry, Lund University , POB 124, 22 100 Lund, Sweden. 4. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic , Flemingovo nám. 2, 16610 Prague 6, Czech Republic. 5. Chemistry Department, Texas A&M University , 3255 TAMU, College Station, Texas 77843, United States. 6. Institut für Physik, Humboldt-Universität zu Berlin , Newtonstr. 15, 12489 Berlin, Germany.
Abstract
A combination of Fourier transform infrared and phase transition measurements as well as molecular computer simulations, and thermodynamic modeling were performed to probe the mechanisms by which guanidinium (Gnd+) salts influence the stability of the collapsed versus uncollapsed state of an elastin-like polypeptide (ELP), an uncharged thermoresponsive polymer. We found that the cation's action was highly dependent upon the counteranion with which it was paired. Specifically, Gnd+ was depleted from the ELP/water interface and was found to stabilize the collapsed state of the macromolecule when paired with well-hydrated anions such as SO42-. Stabilization in this case occurred via an excluded volume (or depletion) effect, whereby SO42- was strongly partitioned away from the ELP/water interface. Intriguingly, at low salt concentrations, Gnd+ was also found to stabilize the collapsed state of the ELP when paired with SCN-, which is a strong binder for the ELP. In this case, the anion and cation were both found to be enriched in the collapsed state of the polymer. The collapsed state was favored because the Gnd+ cross-linked the polymer chains together. Moreover, the anion helped partition Gnd+ to the polymer surface. At higher salt concentrations (>1.5 M), GndSCN switched to stabilizing the uncollapsed state because a sufficient amount of Gnd+ and SCN- partitioned to the polymer surface to prevent cross-linking from occurring. Finally, in a third case, it was found that salts which interacted in an intermediate fashion with the polymer (e.g., GndCl) favored the uncollapsed conformation at all salt concentrations. These results provide a detailed, molecular-level, mechanistic picture of how Gnd+ influences the stability of polypeptides in three distinct physical regimes by varying the anion. It also helps explain the circumstances under which guanidinium salts can act as powerful and versatile protein denaturants.
A combination of Fourier transform infrared and phase transition measurements as well as molecular computer simulations, and thermodynamic modeling were performed to probe the mechanisms by which guanidinium (Gnd+) salts influence the stability of the collapsed versus uncollapsed state of an elastin-like polypeptide (ELP), an uncharged thermoresponsive polymer. We found that the cation's action was highly dependent upon the counteranion with which it was paired. Specifically, Gnd+ was depleted from the ELP/water interface and was found to stabilize the collapsed state of the macromolecule when paired with well-hydrated anions such as SO42-. Stabilization in this case occurred via an excluded volume (or depletion) effect, whereby SO42- was strongly partitioned away from the ELP/water interface. Intriguingly, at low saltconcentrations, Gnd+ was also found to stabilize the collapsed state of the ELP when paired with SCN-, which is a strong binder for the ELP. In this case, the anion and cation were both found to be enriched in the collapsed state of the polymer. The collapsed state was favored because the Gnd+cross-linked the polymerchains together. Moreover, the anion helped partition Gnd+ to the polymer surface. At higher saltconcentrations (>1.5 M), GndSCN switched to stabilizing the uncollapsed state because a sufficient amount of Gnd+ and SCN- partitioned to the polymer surface to prevent cross-linking from occurring. Finally, in a third case, it was found that salts which interacted in an intermediate fashion with the polymer (e.g., GndCl) favored the uncollapsed conformation at all saltconcentrations. These results provide a detailed, molecular-level, mechanistic picture of how Gnd+ influences the stability of polypeptides in three distinct physical regimes by varying the anion. It also helps explain the circumstances under which guanidinium saltscan act as powerful and versatile protein denaturants.
Numerous processes,
from ion toxicity to the pickling of cucumbers,
have been shown to follow the Hofmeister series, a rank ordering of
ion specific effects on the physical properties of organic molecules,
proteins, and colloids in aqueous solutions containing salts.[1−3] Reversed or inverted Hofmeister series have also been reported.[4−6] More recently, attention has been focused on the underlying molecular
level mechanisms involved in these processes in order to shed light
on the recurring ion trends.[5,7−9] For example, weakly hydrated and polarizable anions (such as SCN–, I–, or ClO4–) have been shown to interact with backbone methylene groups in proteins
and peptides.[7,8] By contrast, Li+, Ca2+, Mg2+, and other divalent cations have been shown
to interact, albeit very weakly, with the amideoxygen.[9] The specific nature of the anion is usually the
predominant factor in determining ion specific Hofmeister effects.
Nevertheless, a well-known exception to this observation involves
the behavior of Gnd+, which is widely used as a protein
denaturant.Compared to metalcations, Gnd+ has a
unique molecular
structure (Figure ). It possesses flat hydrophobic faces, yet it is capable of directional
H-bonding along its edges via three NH2 groups. Because
of this dual character, Gnd+’s physicochemical behavior
is very unusual. For instance, the activity coefficients of its salts
decrease continuously up to the solubility limit, whereas the activity
coefficients for most common salts decrease at low concentration,
but turn around and begin increasing beyond 1 M.[10] Also, it has been shown that Gnd+ is significantly
less depleted from the air/water interface than other cations, and
it was shown that this cation forms like-charged pairs in aqueous
solutions via MD simulation studies.[11−14] Gnd+ salts are widely
used in biotechnology. Curiously, only guanidinium salts formed with
more weakly hydrated counteranions (e.g., GndSCN or GndCl) are used
for protein denaturation.[13,15] The mechanism and kinetics
of the denaturing action of GndCl on proteins attracted significant
recent attention, providing strong experimental[14,16,17] and simulation[17,18] evidence for favorable interaction with most amino acid side chains.[14,17] There was less consensus, however, as to whether and how strongly
this cation interacted with the protein backbone.[19−21] By contrast,
salts formed with strongly hydrated anions (e.g., Gnd2SO4) can actually behave as protein stabilizers.[22] To date, the molecular level mechanism of this counteranion
dependency is not well understood.
Figure 1
(A) Schematic illustration of how Gnd2SO4 makes the collapsed state of the polypeptide
favorable via ion exclusion.
(B) Schematic illustration of how GndSCN makes the collapsed state
of polypeptide more favorable (at <1 M salt concentration) via
guanidinium inclusion along with thiocyanate binding to the backbone
as illustrated in the zoomed-in picture. This behavior switches over
to favoring the uncollapsed polypeptide upon additional ion inclusion
at higher salt concentration (>1.5 M).
(A) Schematic illustration of how Gnd2SO4 makes the collapsed state of the polypeptide
favorable via ion exclusion.
(B) Schematic illustration of how GndSCN makes the collapsed state
of polypeptide more favorable (at <1 M saltconcentration) via
guanidinium inclusion along with thiocyanate binding to the backbone
as illustrated in the zoomed-in picture. This behavior switches over
to favoring the uncollapsed polypeptide upon additional ion inclusion
at higher saltconcentration (>1.5 M).Herein, we have systematically investigated the influence
of guanidiniumsalts (GndSCN, GndNO3, GndCl, Gnd2SO4, and Gnd2CO3) on polypeptide aggregation and
hydrophobiccollapse in aqueous solutions, focusing on the molecular
mechanisms that give rise to protein solubility and stability. ELPs
were employed as model biomacromolecules. The polymersconsisted of
120 repeating pentameric units of Val–Pro–Gly–Val–Gly
with short leader and trailer sequences.[23] This polypeptide displays an inverse phase transition above its
lower critical solution temperature (LCST). Previously, it was shown
that the LCST behavior of ELPs followed a direct anionic Hofmeister
series for a series of sodium salts.[24] Strikingly,
however, in the current study we found that a series of Gnd+ salts displayed far richer and more complex phase behavior. Namely,
the LCST decreased at concentrations below 0.5 M in the following
order: GndSCN > Gnd2SO4 > Gnd2CO3 > GndNO3. The LCST curve, however, turned
around
and began to increase for GndSCN above 1 M salt. Moreover, GndCl did
not lead to a decrease in the LCST even at low saltconcentrations,
but continuously caused an increase in the LCST at all concentrations
tested.To understand the origins of macromolecular solubility
in the presence
of various Gnd+ salts, we performed attenuated total reflection
(ATR)-Fourier transform infrared spectroscopy experiments on ELP solutions
where the temperature was set above the LCST value. This allowed us
to determine whether salt ions were accumulated into or excluded from
the collapsed state of the macromolecules. Two diverse salting-out
mechanisms for guanidinium salts were discovered that were directly
dependent on the identity of the counteranion. Specifically, the polypeptide
could be salted out of solution by the standard excluded volume (or “depletion”)
mechanism.[25][26] This was the case with Gnd2SO4 and Gnd2CO3 salts (Figure A). A novel mechanism, however, was discovered based
on the accumulation of both Gnd+ and the counteranion into
the collapsed state of the polypeptide for GndSCN at low saltconcentrations
(up to 1.5 M) (Figure B). At higher concentrations of GndSCN, the cation and anion coated
the polymer surface leading to resolubilization of the macromolecule
in an extended conformation. Such intriguing polypeptide solubility
data were further rationalized by a combination of a solution theory-based
thermodynamic model[27] and atomistic and
coarse-grained simulations.[25]
Results
Phase Transitions
of ELPs with Guanidinium Salts
Figure plots the lower
critical solution temperature (LCST) of the ELP with increasing concentrations
of 5 Gnd+ salts. As can be seen, substantially different
macromolecule solubility trends were observed depending on the salt
identity. More specifically, the hydrophobiccollapse temperature
of the ELP increased linearly as a function of GndClconcentration
(green circles), whereas it remained nearly unchanged with GndNO3 (black squares). On the other hand, Gnd2CO3 and Gnd2SO4 decreased the LCST of the
polypeptide, where the latter was slightly more efficient in this
process (gray diamonds and blue triangles, respectively). All of these
salts yielded essentially monotonic trends as a function of saltconcentration
up to 2 M or up to their solubility limit. By contrast, nonmonotonic
behavior was obtained in the presence of GndSCN (red triangles). Specifically,
the polypeptide was salted-out at low saltconcentrations, but the
solubility increased at higher saltconcentrations (>1.5 M). As
such,
the data suggested that GndSCN had a complex macroscopic effect in
which at least 2 major factors influencing the macroscopic behavior
were dominant at different concentrations. The overall salting out
efficacy at low saltconcentrations was as follows:
Figure 2
LCST measurements of 10 mg/mL ELP solutions
as a function of guanidinium
salt concentration. All standard deviations were within the data points
drawn. Each symbol represents data points from six measurements, and
the solid lines are fits to eq . No data were obtained between 1.0 and 1.5 M GdnSCN, where
the LCST
value fell below 4 °C (dashed portion of the red line).
LCST measurements of 10 mg/mL ELP solutions
as a function of guanidiniumsaltconcentration. All standard deviations were within the data points
drawn. Each symbol represents data points from six measurements, and
the solid lines are fits to eq . No data were obtained between 1.0 and 1.5 M GdnSCN, where
the LCST
value fell below 4 °C (dashed portion of the red line).The place of GndSCN in this series
changed and it became a potent
salting-in agent at higher saltconcentrations (>1.5 M). This ordering
and behavior stand in sharp contrast to that found with both the standard
and inversed anionic Hofmeister series.[24] It should be noted that the data in Figure were taken down to 4 °C, and the broken
dashed line in the fit to the SCN– curve (shown
in red) indicates that no data was obtained between 1.0 and 1.5 M
NaSCN.Previous LCST measurements with the same ELP, but using
sodium
saltscould be fit to a simple empirical equation which contained
just a linear term and a Langmuir isotherm.[7,24,28] This equation, however, could not be used
for the GndSCN data in Figure . Moreover, a direct Hofmeister series for anions was not
observed when Gnd+ was used in place of Na+.
This directly raises the question as to whether the standard ideas
of binding and depletion are sufficient to understand the phase behavior
of the ELPs when Gnd+ is introduced. Specifically, it is
generally assumed that ions which salt-out thermoresponsive polymers,
like ELPs, would be excluded from the collapsed state. The data in Figure for GndSCN suggest,
however, that Gnd+ might induce polymercollapse by accumulating
into the collapse state of the macromolecule at low GndSCNconcentrations.
A recently developed thermodynamic model has correlated protein solubility
to a thermodynamiccharacterization of the differences between the
soluble and collapsed states of the macromolecule.[27] Such work predicts a wider variety of more complex LCST
line shapes with saltconcentration than have previously been observed.A basiccategorization of the possible regimes of salt action with
salt type and concentration have been made by statistical mechanics
modeling using Flory theory and coarse grain simulations.[25] Three distinct regimes of the concentration
dependent cosolvent (e.g., salt) action were observed. The first regime
involves collapse due to cosolvent depletion (or exclusion). Under
these conditions, the cosolvent is depleted from the polymer/water
interface, and the polymercollapses to expose less surface area (a
cosolvent entropic effect). In the second regime, the polymer swells
due to weak attraction (weak binding). In this regime, the polymer
swells to expose a larger surface area because of favorable interactions
with the cosolute. Finally, in a third regime, one encounters collapse
due to strong attraction (strong binding). In this last case, the
cosolute binds strongly enough to the polymer surface that it leads
to bridging or cross-linking. Specifically, the cosolvent links the
polymerchains together and thus stabilizes the collapsed state on
enthalpic grounds. Guided by these ideas, we decided to test directly
the assumption that Gnd+ salts were really always excluded
from the collapsed state of ELPs, especially when the introduction
of salt led to hydrophobiccollapse (e.g., GndSCN at low concentration).
This was done using ATR-FTIR. As described in the next section, the
vibrational resonances of individual ions were probed and it was possible
to determine if they were accumulated into or depleted from the collapsed
state of the macromolecules.
Probing the Collapsed State of ELPs by ATR-FTIR
Several
thermoresponsive polymers, including solutions of ELPs, undergo an
inverse phase transition to form an aqueous two-phase system (ATPS).[29−31] When the polymer solution is heated above its phase transition temperature,
a cloudy solution initially forms (i.e an LCST), but this solution
gradually separates into protein rich and protein poor phases (i.e
an ATPS). For ELPs, the protein rich phase consists primarily of an
aqueous solution of the collapsed state of the macromolecule.[30] One can therefore probe whether salt ions are
accumulated into this phase or depleted from it. To answer this question,
a comparison was made for the absorbance of vibrational bands of the
ions in the ELP rich phase with an aqueous salt solution without the
ELP. The saltconcentration was initially identical in both solutions
before phase separation in the ELP solution took place. Details of
the measurements and additional controls are provided in the Supporting Information section (Figure S1).In a first set of experiments, a 10 mg/mL ELP solution in D2Ocontaining 0.5 M perdeuterated guanidiniumthiocyanate (d-GndSCN) was heated to 45 °C. The solution phase separated
into an ATPS with the protein rich phase forming directly adjacent
to a diamond-coated ZnSe crystal that served as a single bounce ATR-FTIR
stage. A schematic depiction of this experiment is shown in Figure A. Vibrational measurements
were made and the resulting spectrum in the amide stretch region is
depicted with the green curve in Figure B. This spectrum could be fit to a C–N
stretching band for the guanidiniumcation at 1592 cm–1 (red curve) as well as bands from the polypeptide (peaks at 1619,
1643, and 1664 cm–1). The individual fits for the
three polypeptide peaks are shown with gray lines. The first and third
peaks are associated with the amide I bands and can be assigned to
β-turn and β-aggregate structures, whereas the 1644 cm–1 band arises from a combination of random coil and
distorted β-sheet structures.[32,33] Next, the
experiment was repeated without any ELP in the solution, but also
at 45 °C as a reference spectrum. In this case, only a single
peak at 1596 cm–1 was found (blue curve). Strikingly,
its amplitude was reduced significantly compared to the one with the
polymer in the solution. Such a result is strong evidence that the
Gnd+cation is favorably accumulated into the collapsed
state in comparison to its uniform concentration in a 0.5 M aqueous
solution of d-GndSCN. In addition to obtaining data
in the C—N stretch and amide band region, data was also taken
near 2060 cm–1 for the C=N stretch of the
SCN– anion (Figure C). As can be seen, SCN– was also
strongly partitioned into the protein rich phase (red curve) compared
to its uniform distribution in a similar solution without the ELP
(blue curve). It should be noted that both the C—N peak from
Gnd+ and the C=N peak from SCN– were red-shifted by ∼4 cm–1 in the protein
rich ATPS phase compared with the resonances found in aqueous solution
without the polypeptide. This red shift is direct evidence for strong
interactions between the salt ions and the macromolecules.
Figure 3
(A) Experimental
scheme showing an aqueous solution droplet (100
μL) placed onto the diamond coated ZnSe ATR crystal. The upper
left insert represents an initially homogeneous polypeptide solution
(below the LCST), whereas the upper right inset, represents the ATPS
which is formed above the LCST. (B) Fitted ATR-FTIR spectra of the
collapsed state of the ELP above the LCST (45 °C) in the presence
of 0.5 M d-GndSCN, in D2O in the amide
I spectral region, and (C) in the C=N stretch band region of
SCN–. (D) Fitted spectra of the same solution except
in the presence of 0.5 M d-Gnd2SO4 in D2O in the amide I spectral region, along with
(E) the vibrational spectra of the S—O stretching band of SO42–. (F) Plots of the amide I spectral region
with and without the macromolecule in solutions containing 0.5 M d-GndCl. In panels B–F, the red and blue curves indicate
data taken in the presence of the ELP and in its absence, respectively.
The gray lines represent three Gaussian fits to the amide I bands,
whereas the green curves represent the overall measured spectra. The
inset schematics in panels C, E, and F depict ion accumulation for
GndSCN and ion depletion for Gnd2SO4 along with
only slight ion accumulation for GndCl. The asterisks in panel E denote
weak fingerprint vibrational resonances related to polypeptide.
(A) Experimental
scheme showing an aqueous solution droplet (100
μL) placed onto the diamond coated ZnSe ATR crystal. The upper
left insert represents an initially homogeneous polypeptide solution
(below the LCST), whereas the upper right inset, represents the ATPS
which is formed above the LCST. (B) Fitted ATR-FTIR spectra of the
collapsed state of the ELP above the LCST (45 °C) in the presence
of 0.5 M d-GndSCN, in D2O in the amide
I spectral region, and (C) in the C=N stretch band region of
SCN–. (D) Fitted spectra of the same solution except
in the presence of 0.5 M d-Gnd2SO4 in D2O in the amide I spectral region, along with
(E) the vibrational spectra of the S—O stretching band of SO42–. (F) Plots of the amide I spectral region
with and without the macromolecule in solutions containing 0.5 M d-GndCl. In panels B–F, the red and blue curves indicate
data taken in the presence of the ELP and in its absence, respectively.
The gray lines represent three Gaussian fits to the amide I bands,
whereas the green curves represent the overall measured spectra. The
inset schematics in panels C, E, and F depict ion accumulation for
GndSCN and ion depletion for Gnd2SO4 along with
only slight ion accumulation for GndCl. The asterisks in panel E denote
weak fingerprint vibrational resonances related to polypeptide.In a second set of experiments,
the partitioning of salt ions into
the collapsed state of the ELP was measured in 0.5 M d-Gnd2SO4 (Figure D). Compared to the results in Figure B, the 1643 cm–1 peak was reduced in intensity relative to the 1664 and 1619 cm–1 peaks. This is a clear indication of more ordered
secondary and tertiary structure for the ELP in this latter case.[34] Moreover, there was far less Gnd+ associated with the protein rich layer compared with the GndSCN
experiments. Indeed, an aqueous system containing 0.5 M Gnd2SO4 in the absence of the ELP reveals a somewhat stronger
C–N stretch intensity (blue curve) compared to when the biopolymer
was present (red curve). As such, Gnd+ was actually modestly
depleted from the collapsed state of the polymer. Next, one can look
at the S–O stretch resonance at 1098 cm–1 from the SO42– counteranion (Figure E). As can be seen,
SO42– was strongly depleted from the
collapsed polymer state by comparing the S–O resonance intensity
(red curve) with the case where the polymer was not present (blue
curve). It should be noted that two small bands from the polypeptide
near 1046 and 1060 cm–1 were present in the sulfate
ion spectrum. These are marked with asterisks to denote that they
are from the biopolymer rather than the ion. Significantly, for Gnd2SO4, there was almost no peak shift for either
the Gnd+ or SO42– resonances
in the polymer rich phase compared with aqueous solutions containing
no polymer. This would suggest that these ions interacted more weakly
with the ELP.In the final set of vibrational experiments, we
tested whether
Gnd+ from 0.5 M d-GndCl partitioned to
the collapsed state of the polypeptide using the amide I spectral
region (Figure F).
Interestingly, the amide I band intensity in the protein rich phase
was only about ∼45% as high compared to the other two guanidiniumsalts (Figure B,D).
This indicates that the density in the protein rich phase was lower,
which may reflect a slight charging of the polymer (see SI Section S1 for further details as well as
Figure S2E). Moreover, there was a small decrease in the C–N
vibrational resonances of Gnd+ ion (1594 cm–1) for the solution without the polypeptide. This indicates a very
slight partitioning of Gnd+ ions to the collapsed ELPs.
There is also a small (∼2 cm–1) red shift
in this vibrational resonance compare to its solution without the
ELP, indicating modest GndCl–macromolecule interactions. Unfortunately,
the Cl– partitioning into the collapsed ELPs could
not be probed using this method as this anion did not have a corresponding
vibrational signature that could be measured. Nevertheless, based
on the monotonic increase in the LCST found in Figure as a function of GndClconcentration, modest
anion accumulation would be expected to occur. The other two guanidiniumsalts, GndNO3 and Gnd2CO3, showed
analogous trends to the spectra described above (see Figure S2). Namely, Gnd+ ions from GndNO3 accumulated in the protein rich phase, like GndSCN, albeit to a
much lesser extent. Moreover, Gnd2CO3 behaved
similarly to Gnd2SO4 and the cations remained
excluded from the collapsed state of macromolecule (see SI Section S1 and Figure S2).
Thermodynamic
Model, Coarse-Grained and All-Atom Simulations
As noted above,
classical thermodynamic models would predict that
salts which lower the LCST of ELPs would do so via an excluded volume
effect. Therefore, one might expect that the ions from 0.5 M solutions
of both GndSCN and Gnd2SO4 would be strongly
excluded from the collapsed state of the macromolecules. The data
in Figures and 3 reveal that this is not the case for the former
salt. Since only Gdn2SO4 is depleted from the
collapsed state, whereas GndSCN is actually enriched in it, the two
salts must lead to hydrophobiccollapse by two distinct mechanisms.
A new model is therefore required that goes beyond standard mean field
descriptions (described in the SI Section
S2) and additive models[35−37] to explain the differences between
the two salts.Our thermodynamic model provides a direct link
between salt-induced changes in the LCST and three macroscopic thermodynamic
parameters of polymer molecules in salt solutions.[27,38] Briefly, this model invokes the observation that the free energy
difference, ΔG, of the compact globule to random
coil phase transition is, at equilibrium, equal to the logarithm of
the population ratio of these two states multiplied by −RT, where R is the universal gas constant
and T is the absolute temperature (see SI). Under a small perturbation, i.e., upon addition
of a cosolvent or a variation in temperature, the free energy change
at the phase transition can be expanded into a Taylor series (eq ),Significantly,
the transition entropy, ΔS0 = −(∂ΔG/∂T), and the m-value, m = −(∂ΔG/∂cs), fall out naturally
as first-order responses to these two perturbations (see full derivation
in the SI). Because ΔG = 0 at the phase transition temperature, the Taylor series ties
the two perturbations together. A particularly useful expression for
the change in LCST, ΔT(cs), is given by the relation in eq , which takes the above Taylor expansion out
to second order, but sets the heat capacity effects equal to zero,
because changes in the LCST are quite small (ΔT ≪ T0).[27] In this case, one gets m′ and ΔS′0 terms, leading to the relationship
below for the change in the transition temperature:Results of the application
of this model to the LCST data in Figure are presented in Table . The two distinct
mechanisms for the SCN– and SO42– counteranions are reflected in the values presented in the table.
In particular, sulfate has a negative m value and
a zero m′ value, consistent with the fact
that it salts out under all conditions. The situation is opposite
for GndCl, which has a positive m value. This is
typical for denaturation agents.[27] The
situation is more complex for GndSCN. In this case, a very negative m value is overcome by a positive m′
value, which models the turnover from a salting out to a salting in
effect. It should be noted that the nonzero value of ΔS′0 found for GndSCN is essential for
a quantitative description of the steep nonlinear rise of the LCST
at higher saltconcentrations (>1 M), and is indicative of attractive
GndSCN–ELP interactions. A final point is that eq can be rewritten in terms of preferential
binding coefficients[27] as discussed in
the SI Method section, and the analysis
of the LCST data can be directly related to salt partitioning as summarized
in SI Section S2 (see Figure S3 and Table
S2).
Table 1
Summary of the Fitted m Value, m′ Values, and Change in the Transition
Entropy, ΔS0′ Abstracted
from Fitting the Data in Figure by Using eq a
salt
m [J/mol/M]
m′ [J/mol/M2]
ΔS0′fit [J/mol/K/M]
GndCl
725
–150
13.5
GndNO3
55
0
0
Gnd2CO3
–590
0
0
Gnd2SO4
–1020
0
0
GndSCN
–2320
2170
19.7
The solid lines in the Figure represent fits to eq . Note that all values
are given per mole of the pentameric repeating unit of the ELP. In
the fitting procedure, the transition entropy in neat water, ΔS0 = −75 J/mol/K was used, as determined
by the transition enthalpy from DSC experiments.[39]
The solid lines in the Figure represent fits to eq . Note that all values
are given per mole of the pentameric repeating unit of the ELP. In
the fitting procedure, the transition entropy in neat water, ΔS0 = −75 J/mol/K was used, as determined
by the transition enthalpy from DSC experiments.[39]To help obtain
molecular level insight into the thermodynamic model,
we employed coarse-grained Langevin dynamics simulations of a chain
of beads (representing a flexible polymer) with explicit cosolute
and implicit solvent (see the Supporting Information Methods section for details).[25] Anions
and cations were combined into single cosolute beads, which were used
to represent salt-polymer interactions. The cosolute-polymer interactions
were tuned to model the effects of different salts. In particular,
three cases were considered: a repelled cosolvent (resembling Gnd2SO4), a weakly attracted cosolvent (resembling
GndCl), and a strongly attracted cosolvent (resembling GndSCN). These
three generic types of interactions have been described in previous
work.[25] The results from coarse-grained
simulations for each of these cases are presented in Figure A. The graph plots the radius
of gyration of the polymer as a function of cosolvent concentration,
where smaller polymer sizes (radius of gyration values, Rg) represent the collapsed state of an ELP, whereas larger
more extended polymers would be equivalent to the uncollapsed state.
As expected, the strongly excluded cosolvent simply led to the collapse
of the polymer (blue curve), whereas the weakly attracted cosolvent
led to polymerswelling (green curve). Significantly, a strongly attracted
cosolvent led to salting-out at low concentration, but salting-in
at higher concentration (red curve). These simulations capture the
key features found in Figure . As expected, an excluded cosolvent led to the collapse of
the polymerchain (analogous to Gnd2SO4), whereas
a weakly binding cosolvent (analogous to GndCl) led to polymerswelling.
However, the case with a strongly binding cosolvent was more complex
(analogous to GndSCN). In this case, collapse was seen at low cosolvent
concentrations, but re-entrant swelling was found at higher concentrations.
Figure 4
(A) Results
of coarse-grained simulations for a model polymer in
cosolvent solutions that bind strongly (red), weakly (green), or are
depleted from the polymer surface (blue). The results plot the radius
of gyration of the polymer (scaled by that of an ideal chain with
the same bond length) as a function of cosolvent concentration. (B)
Distribution of cosolvent from the center of the polymer at 1 M concentration.
The inset presents the same distribution curves at 13 M cosolvent.
In panel B, r denotes the distance to center of mass
of the polymer. (C) Schematic depiction of the mechanism of swelling
and compression of the polymer (red spheres) caused by the cosolvent
moieties (yellow spheres) in the low (1 M) and high (13 M) concentration
regimes. Note that the existence of multivalent binding interactions
of the cosolvent at low solvent concentration is responsible for the
polymer collapse in the strong binding regime. Only the cosolvent
molecules in direct contact (<4 Å) with the polymer chain
are depicted for clarity.
(A) Results
of coarse-grained simulations for a model polymer in
cosolvent solutions that bind strongly (red), weakly (green), or are
depleted from the polymer surface (blue). The results plot the radius
of gyration of the polymer (scaled by that of an ideal chain with
the same bond length) as a function of cosolvent concentration. (B)
Distribution of cosolvent from the center of the polymer at 1 M concentration.
The inset presents the same distribution curves at 13 M cosolvent.
In panel B, r denotes the distance to center of mass
of the polymer. (C) Schematic depiction of the mechanism of swelling
and compression of the polymer (red spheres) caused by the cosolvent
moieties (yellow spheres) in the low (1 M) and high (13 M) concentration
regimes. Note that the existence of multivalent binding interactions
of the cosolvent at low solvent concentration is responsible for the
polymercollapse in the strong binding regime. Only the cosolvent
molecules in direct contact (<4 Å) with the polymerchain
are depicted for clarity.To understand the origins of these three regimes in more
detail,
we have analyzed the cosolvent distribution near the polymercenter
(Figure B). Specifically,
we have introduced a radial distribution function g(r) = ρ(r)/ρ0. This is the ratio of the local cosolvent density at a distance r from the polymercenter, ρ(r),
with the average cosolvent density denoted as ρ0.
At lower cosolvent concentrations (∼1 M), we see striking differences
depending on the type of cosolvent which was employed. Namely, the
excluded cosolvent (blue curve) was depleted from the vicinity of
the vicinity of the polymer (g(r) < 1), the weakly interacting
cosolvent caused little changed (green curve), whereas the strongly
interacting cosolvent (red curve) led to significant enrichment of
the cosolvent (g(r) ≫ 1). These simulation results
strongly mirror
the trend found in the ATR-FTIR measurements (Figure ). On the other hand, at a much higher cosolvent
concentrations (∼13 M, inset in Figure B), the strongly binding cosolvent shows
much less pronounced accumulation. This is expected, as even a strongly
binding cosolvent will saturate and the g(r) values decrease toward 1, due to the normalization with
respect to the bulk cosolvent concentration.Snapshots from
the Langevin dynamics simulations of the polymer
as a function of cosolvent concentration are shown for the three different
binding regimes (Figure C). These cosolvent distributions correlated well with the ion distributions
of the Gnd+ salts found around the macromolecules using
explicit water in all atom MD simulations (described below in Figure ) as well as the
ion related vibrational signals observed in the ATR-FTIR spectra (Figure S2 and Figure , respectively). In particular, a change
in the conformation of the polymer from a more globular to a more
extended structure occurred as the cosolvent concentration was increased
in the strong binding regime. This result was consistent with the
idea that strongly interacting cosolvents bound the polymerchains
together at low concentration. Note, however, that for weakly bound
nonioniccosolvents, the stabilization of the collapsed state can
have different origins, related to changes in the entropy of the polymerchain.[40,41] Finally, as the cosolvent concentration
was increased, the polymerchains became coated with the cosolvent
and were, thus, extended by it.
Figure 5
Spatial density maps of the ions, as obtained
from all atom MD
simulations. (A) This snapshot shows the depletion of Gnd2SO4 (Gnd+ in purple and SO42– in silver) from the vicinity of the VPGVG pentapeptide.
(B) GndCl (Cl– in orange) and (C) GndSCN (SCN– in yellow). The contours plotted for each ion correspond
to 4× the bulk density for all three snapshots.
Spatial density maps of the ions, as obtained
from all atom MD
simulations. (A) This snapshot shows the depletion of Gnd2SO4 (Gnd+ in purple and SO42– in silver) from the vicinity of the VPGVG pentapeptide.
(B) GndCl (Cl– in orange) and (C) GndSCN (SCN– in yellow). The contours plotted for each ion correspond
to 4× the bulk density for all three snapshots.Finally, salt-specific affinity to the ELP surface
was investigated
by all atom MD simulations (see SI Methods
for full simulation details). Figure shows Gnd+ distributions (in purple) near
a pentameric elastin motif (VPGVP with capping groups on each end)
with (A) SO42– (in silver), (B) Cl– (in orange), and (C) SCN– (in yellow)
counterions, respectively. As can be seen, guanidiniumcations could
interact with the carbonyl groups at the backbone via H-bonding with
its amine groups. The hydrophobic side chains were found to interact
with the flat CN3 faces of the cations. The differences
between the investigated salts are clearly manifested. Gnd2SO4 was found to be the most depleted ion at the peptide
surface, while GndCl was neither strongly attracted nor depleted.
On the other hand, GndSCN was significantly enriched at the peptide
surface. The locations of Gnd+ at the peptide surface were
similar for all three salts, but the amount increased in the order:
SO42– < Cl– <
SCN–.The radial distribution functions corresponding
to the snapshots
in Figure are provided
in Figure . The preferential
binding coefficients to the extended state of elastin are presented
in Figure S8 in the SI. The affinities
of the guanidinium salts to elastin differ substantially from each
other and can be ordered as GndSCN > GndCl > Gnd2SO4.
Figure 6
Proximal distribution function of the investigated guanidinium
salts around the extended VPGVG pentapeptide. The distribution of
anions is shown in the panel A, that of the Gnd+ cation
is in the panel B, and overall salt distribution in the panel C.
Proximal distribution function of the investigated guanidiniumsalts around the extended VPGVG pentapeptide. The distribution of
anions is shown in the panel A, that of the Gnd+cation
is in the panel B, and overall salt distribution in the panel C.
Discussion and Conclusions
Gnd+ is a powerful denaturant that interacts with polypeptides
in a unique and complex fashion compared to metalcations. Even though
metal ions can form ion pairs with aspartate and glutamate residues,
they are strongly depleted from the more hydrophobic portions of proteins.
Indeed, even alkali earth ions such as Mg2+ and Ca2+ associate only very weakly with the amideoxygen on the
backbones of proteins.[9,42] Gnd+ is different
in that it can form multiple donating hydrogen bonds along its edges.
Moreover, the hydrophobic faces of this cation can interact with the
hydrophobic portions of peptides and proteins. Even so, its interactions
with uncharged polypeptides are weak and dictated by the nature of
the counteranion in solution with which it is paired. Specifically,
when paired with a strongly excluded anion, such as SO42–, Gnd+ is somewhat depleted from the
polymer/water interface. This leads to the stabilization of the collapsed
state of ELPs via a standard excluded volume effect (Figure D,E and Figure S2). When Gnd+ is paired with a more weakly
hydrated anion such as SCN–, the situation is changed.
SCN– partitions favorably to the amide backbone
of polypeptides and Gnd+ follows the anion and becomes
enriched at the polypeptide/water interface (Figure B,C). Under these conditions, Gnd+ helps to keep the polypeptide in the collapsed state at low concentrations
as it can bridge polymerchains together via intra- and intermolecular
H-bonding interactions. The collapsed state in this case is quite
different than the one caused by salt ion depletion. Indeed, ATR-FTIR
reveals that the amide I region of the collapsed peptide chains contain
less secondary structure when GndSCN is incorporated compared to conditions
where salting out occurs via exclusion. Moreover, at higher GndSCNconcentrations, the effect of the saltchanges entirely. In that case,
a sufficient amount of Gnd+ is bound such that individual
cations can no longer bridge multiple portions of the polymerchains
together. As such, the salt switches over to stabilizing the uncollapsed
state of the macromolecule and works as a more classic denaturant.
Collapse and re-entrant behavior was also found upon introducing GndSCN
to additional thermal response polymer systems as described in the Supporting Information (see Section S5 and Figure
S9). Such results speak to the generality of this mechanism.Each of the regimes described above can be understood and classified
by a cosolute-polymer model based on simulations and statistical mechanics
theory (compare Figure S3 and Figure S7). This model enables us to predict the trends for key thermodynamic
properties of a polymer in aqueous solutions, such as the m value and the transition enthalpy. Apart of the differences
in preferential binding coefficient (Figure S3D), which closely follow the shapes of LCST curves from Figure , the transition free energy
of the macromolecule as a function of cosolvent concentration can
also be abstracted (Figure S3B). As expected,
the free energy of the noninteracting and weakly interacting cosolvents
change linearly with saltconcentration. Specifically, the noninteracting
cosolvent raises the free energy, whereas the weakly interacting one
lowers it. By contrast, the transition free energy is raised by the
strongly interacting cosolvent at low concentrations, but turns around
and is actually continuously lowered at higher concentration. This
change in behavior occurs because the nature of the interaction changes
from bridging (cross-linking) to nonbridging.When used as a
denaturant, Gnd+ is typically either
paired with Cl– or SCN–.[43,44] The current studies show it would simply be ineffective as a denaturant
when paired with a strongly excluded anion such as SO42–. For proteins that are well above their isoelectric
point, Cl– is a satisfactory choice, as Gnd+ will partition to the negatively charged interface on electrostatic
grounds. In this case, it should still cause a stabilizing effect
at low saltconcentrations, but lead to denaturation at high saltconcentrations. By contrast, proteins that are near to or below their
isoelectric points require the use of GndSCN to cause denaturation
as Gnd+ is not partitioned favorably to neutral or positively
charged polymer surfaces. As such, the partitioning of the anion to
the interface is needed to render the protein surface sufficiently
negatively charged to recruit Gnd+. It should be noted
that NaSCN is already a reasonably good denaturant, and SCN– will certainly helpcause denaturation on its own. However, Na+ is partitioned away from the protein and replacing it with
Gnd+creates a far more effective denaturant because both
the cation and anion concentration are enhanced at the interface.
Nevertheless, an additive partitioning model[36,37] is not really applicable here, because the affinity of GndSCN for
peptides is larger than that which would be inferred from the combined
affinities of NaSCN and GndCl. Finally, Gnd+ is a more
effective denaturant than NH4+, which interacts
only via hydrogen bonding, as it does not partition favorably to the
hydrophobic regions of the polypeptide. Also, NH4+ does not have the curious property of stabilizing hydrophobiccollapse
at lower saltconcentrations, as it is not an effective cross-linker.
Authors: Laurel M Pegram; Timothy Wendorff; Robert Erdmann; Irina Shkel; Dana Bellissimo; Daniel J Felitsky; M Thomas Record Journal: Proc Natl Acad Sci U S A Date: 2010-04-12 Impact factor: 11.205
Authors: Erik Wernersson; Jan Heyda; Mario Vazdar; Mikael Lund; Philip E Mason; Pavel Jungwirth Journal: J Phys Chem B Date: 2011-10-10 Impact factor: 2.991