Literature DB >> 28050714

Characterization of Change and Significance for Clinical Findings in Radiology Reports Through Natural Language Processing.

Saeed Hassanpour1,2, Graham Bay3, Curtis P Langlotz4.   

Abstract

We built a natural language processing (NLP) method to automatically extract clinical findings in radiology reports and characterize their level of change and significance according to a radiology-specific information model. We utilized a combination of machine learning and rule-based approaches for this purpose. Our method is unique in capturing different features and levels of abstractions at surface, entity, and discourse levels in text analysis. This combination has enabled us to recognize the underlying semantics of radiology report narratives for this task. We evaluated our method on radiology reports from four major healthcare organizations. Our evaluation showed the efficacy of our method in highlighting important changes (accuracy 99.2%, precision 96.3%, recall 93.5%, and F1 score 94.7%) and identifying significant observations (accuracy 75.8%, precision 75.2%, recall 75.7%, and F1 score 75.3%) to characterize radiology reports. This method can help clinicians quickly understand the key observations in radiology reports and facilitate clinical decision support, review prioritization, and disease surveillance.

Keywords:  Imaging informatics; Natural language processing; Radiology reports

Mesh:

Year:  2017        PMID: 28050714      PMCID: PMC5422225          DOI: 10.1007/s10278-016-9931-8

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  14 in total

1.  Automatic detection of acute bacterial pneumonia from chest X-ray reports.

Authors:  M Fiszman; W W Chapman; D Aronsky; R S Evans; P J Haug
Journal:  J Am Med Inform Assoc       Date:  2000 Nov-Dec       Impact factor: 4.497

2.  Strategies for coping with information overload.

Authors:  Richard Smith
Journal:  BMJ       Date:  2010-12-15

Review 3.  Summarization from medical documents: a survey.

Authors:  Stergos Afantenos; Vangelis Karkaletsis; Panagiotis Stamatopoulos
Journal:  Artif Intell Med       Date:  2005-02       Impact factor: 5.326

4.  RadLex: a new method for indexing online educational materials.

Authors:  Curtis P Langlotz
Journal:  Radiographics       Date:  2006 Nov-Dec       Impact factor: 5.333

5.  Voice recognition dictation: radiologist as transcriptionist.

Authors:  John A Pezzullo; Glenn A Tung; Jeffrey M Rogg; Lawrence M Davis; Jeffrey M Brody; William W Mayo-Smith
Journal:  J Digit Imaging       Date:  2008-12       Impact factor: 4.056

6.  Customization in a unified framework for summarizing medical literature.

Authors:  N Elhadad; M-Y Kan; J L Klavans; K R McKeown
Journal:  Artif Intell Med       Date:  2005-02       Impact factor: 5.326

7.  Information extraction from multi-institutional radiology reports.

Authors:  Saeed Hassanpour; Curtis P Langlotz
Journal:  Artif Intell Med       Date:  2015-10-03       Impact factor: 5.326

8.  Extracting information on pneumonia in infants using natural language processing of radiology reports.

Authors:  Eneida A Mendonça; Janet Haas; Lyudmila Shagina; Elaine Larson; Carol Friedman
Journal:  J Biomed Inform       Date:  2005-03-30       Impact factor: 6.317

9.  A general natural-language text processor for clinical radiology.

Authors:  C Friedman; P O Alderson; J H Austin; J J Cimino; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 Mar-Apr       Impact factor: 4.497

10.  Code Abdomen: An Assessment Coding Scheme for Abdominal Imaging Findings Possibly Representing Cancer.

Authors:  Hanna M Zafar; Seetharam C Chadalavada; Charles E Kahn; Tessa S Cook; Caroline E Sloan; Darco Lalevic; Curtis P Langlotz; Mitchell D Schnall
Journal:  J Am Coll Radiol       Date:  2015-06-27       Impact factor: 5.532

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  16 in total

1.  tbiExtractor: A framework for extracting traumatic brain injury common data elements from radiology reports.

Authors:  Margaret Mahan; Daniel Rafter; Hannah Casey; Marta Engelking; Tessneem Abdallah; Charles Truwit; Mark Oswood; Uzma Samadani
Journal:  PLoS One       Date:  2020-07-01       Impact factor: 3.240

2.  Assessment of Explicitly Stated Interval Change on Noncontrast Head CT Radiology Reports.

Authors:  M Braileanu; K Crawford; S R Key; M E Mullins
Journal:  AJNR Am J Neuroradiol       Date:  2019-05-30       Impact factor: 3.825

3.  Comprehensive Word-Level Classification of Screening Mammography Reports Using a Neural Network Sequence Labeling Approach.

Authors:  Ryan G Short; John Bralich; Dave Bogaty; Nicholas T Befera
Journal:  J Digit Imaging       Date:  2019-10       Impact factor: 4.056

4.  Multi-Ontology Refined Embeddings (MORE): A hybrid multi-ontology and corpus-based semantic representation model for biomedical concepts.

Authors:  Steven Jiang; Weiyi Wu; Naofumi Tomita; Craig Ganoe; Saeed Hassanpour
Journal:  J Biomed Inform       Date:  2020-10-01       Impact factor: 6.317

5.  Automatic Determination of the Need for Intravenous Contrast in Musculoskeletal MRI Examinations Using IBM Watson's Natural Language Processing Algorithm.

Authors:  Hari Trivedi; Joseph Mesterhazy; Benjamin Laguna; Thienkhai Vu; Jae Ho Sohn
Journal:  J Digit Imaging       Date:  2018-04       Impact factor: 4.056

6.  Automated Detection of Radiology Reports that Require Follow-up Imaging Using Natural Language Processing Feature Engineering and Machine Learning Classification.

Authors:  Robert Lou; Darco Lalevic; Charles Chambers; Hanna M Zafar; Tessa S Cook
Journal:  J Digit Imaging       Date:  2020-02       Impact factor: 4.056

7.  Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning.

Authors:  Surabhi Datta; Yuqi Si; Laritza Rodriguez; Sonya E Shooshan; Dina Demner-Fushman; Kirk Roberts
Journal:  J Biomed Inform       Date:  2020-06-18       Impact factor: 6.317

8.  A Web Application for Adrenal Incidentaloma Identification, Tracking, and Management Using Machine Learning.

Authors:  Wasif Bala; Jackson Steinkamp; Timothy Feeney; Avneesh Gupta; Abhinav Sharma; Jake Kantrowitz; Nicholas Cordella; James Moses; Frederick Thurston Drake
Journal:  Appl Clin Inform       Date:  2020-09-16       Impact factor: 2.342

Review 9.  Artificial intelligence in paediatric radiology: Future opportunities.

Authors:  Natasha Davendralingam; Neil J Sebire; Owen J Arthurs; Susan C Shelmerdine
Journal:  Br J Radiol       Date:  2020-09-17       Impact factor: 3.039

10.  Natural language processing of radiology reports for the identification of patients with fracture.

Authors:  Nithin Kolanu; A Shane Brown; Amanda Beech; Jacqueline R Center; Christopher P White
Journal:  Arch Osteoporos       Date:  2021-01-06       Impact factor: 2.617

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