Literature DB >> 28049566

An Analysis of Two Genome-wide Association Meta-analyses Identifies a New Locus for Broad Depression Phenotype.

Nese Direk1, Stephanie Williams2, Jennifer A Smith3, Stephan Ripke4, Tracy Air5, Azmeraw T Amare6, Najaf Amin7, Bernhard T Baune5, David A Bennett8, Douglas H R Blackwood9, Dorret Boomsma10, Gerome Breen11, Henriette N Buttenschøn12, Enda M Byrne13, Anders D Børglum14, Enrique Castelao15, Sven Cichon16, Toni-Kim Clarke9, Marilyn C Cornelis17, Udo Dannlowski18, Philip L De Jager19, Ayse Demirkan7, Enrico Domenici20, Cornelia M van Duijn7, Erin C Dunn21, Johan G Eriksson22, Tonu Esko23, Jessica D Faul24, Luigi Ferrucci25, Myriam Fornage26, Eco de Geus10, Michael Gill27, Scott D Gordon28, Hans Jörgen Grabe29, Gerard van Grootheest30, Steven P Hamilton31, Catharina A Hartman32, Andrew C Heath33, Karin Hek34, Albert Hofman35, Georg Homuth36, Carsten Horn37, Jouke Jan Hottenga10, Sharon L R Kardia3, Stefan Kloiber38, Karestan Koenen39, Zoltán Kutalik40, Karl-Heinz Ladwig41, Jari Lahti42, Douglas F Levinson43, Cathryn M Lewis11, Glyn Lewis44, Qingqin S Li45, David J Llewellyn46, Susanne Lucae38, Kathryn L Lunetta47, Donald J MacIntyre9, Pamela Madden33, Nicholas G Martin28, Andrew M McIntosh9, Andres Metspalu48, Yuri Milaneschi30, Grant W Montgomery28, Ole Mors49, Thomas H Mosley50, Joanne M Murabito51, Bertram Müller-Myhsok52, Markus M Nöthen53, Dale R Nyholt54, Michael C O'Donovan55, Brenda W Penninx30, Michele L Pergadia56, Roy Perlis57, James B Potash58, Martin Preisig15, Shaun M Purcell59, Jorge A Quiroz60, Katri Räikkönen61, John P Rice33, Marcella Rietschel62, Margarita Rivera63, Thomas G Schulze64, Jianxin Shi65, Stanley Shyn66, Grant C Sinnamon67, Johannes H Smit30, Jordan W Smoller21, Harold Snieder68, Toshiko Tanaka25, Katherine E Tansey55, Alexander Teumer69, Rudolf Uher70, Daniel Umbricht37, Sandra Van der Auwera71, Erin B Ware72, David R Weir24, Myrna M Weissman73, Gonneke Willemsen10, Jingyun Yang8, Wei Zhao3, Henning Tiemeier74, Patrick F Sullivan75.   

Abstract

BACKGROUND: The genetics of depression has been explored in genome-wide association studies that focused on either major depressive disorder or depressive symptoms with mostly negative findings. A broad depression phenotype including both phenotypes has not been tested previously using a genome-wide association approach. We aimed to identify genetic polymorphisms significantly associated with a broad phenotype from depressive symptoms to major depressive disorder.
METHODS: We analyzed two prior studies of 70,017 participants of European ancestry from general and clinical populations in the discovery stage. We performed a replication meta-analysis of 28,328 participants. Single nucleotide polymorphism (SNP)-based heritability and genetic correlations were calculated using linkage disequilibrium score regression. Discovery and replication analyses were performed using a p-value-based meta-analysis. Lifetime major depressive disorder and depressive symptom scores were used as the outcome measures.
RESULTS: The SNP-based heritability of major depressive disorder was 0.21 (SE = 0.02), the SNP-based heritability of depressive symptoms was 0.04 (SE = 0.01), and their genetic correlation was 1.001 (SE = 0.2). We found one genome-wide significant locus related to the broad depression phenotype (rs9825823, chromosome 3: 61,082,153, p = 8.2 × 10-9) located in an intron of the FHIT gene. We replicated this SNP in independent samples (p = .02) and the overall meta-analysis of the discovery and replication cohorts (1.0 × 10-9).
CONCLUSIONS: This large study identified a new locus for depression. Our results support a continuum between depressive symptoms and major depressive disorder. A phenotypically more inclusive approach may help to achieve the large sample sizes needed to detect susceptibility loci for depression.
Copyright © 2016 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CHARGE consortium; Depressive symptoms; FHIT gene; Genome-wide association study; Major depressive disorder; Psychiatric Genomics Consortium

Mesh:

Substances:

Year:  2016        PMID: 28049566      PMCID: PMC5462867          DOI: 10.1016/j.biopsych.2016.11.013

Source DB:  PubMed          Journal:  Biol Psychiatry        ISSN: 0006-3223            Impact factor:   13.382


  46 in total

1.  Molecular genetics and subjective well-being.

Authors:  Cornelius A Rietveld; David Cesarini; Daniel J Benjamin; Philipp D Koellinger; Jan-Emmanuel De Neve; Henning Tiemeier; Magnus Johannesson; Patrik K E Magnusson; Nancy L Pedersen; Robert F Krueger; Meike Bartels
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-24       Impact factor: 11.205

2.  Genome-wide association-, replication-, and neuroimaging study implicates HOMER1 in the etiology of major depression.

Authors:  Marcella Rietschel; Manuel Mattheisen; Josef Frank; Jens Treutlein; Franziska Degenhardt; René Breuer; Michael Steffens; Daniela Mier; Christine Esslinger; Henrik Walter; Peter Kirsch; Susanne Erk; Knut Schnell; Stefan Herms; H-Erich Wichmann; Stefan Schreiber; Karl-Heinz Jöckel; Jana Strohmaier; Darina Roeske; Britta Haenisch; Magdalena Gross; Susanne Hoefels; Susanne Lucae; Elisabeth B Binder; Thomas F Wienker; Thomas G Schulze; Christine Schmäl; Andreas Zimmer; Dilafruz Juraeva; Benedikt Brors; Thomas Bettecken; Andreas Meyer-Lindenberg; Bertram Müller-Myhsok; Wolfgang Maier; Markus M Nöthen; Sven Cichon
Journal:  Biol Psychiatry       Date:  2010-07-31       Impact factor: 13.382

3.  From depressive symptoms to depressive disorders: the relevance of thresholds.

Authors:  José L Ayuso-Mateos; Roberto Nuevo; Emese Verdes; Nirmala Naidoo; Somnath Chatterji
Journal:  Br J Psychiatry       Date:  2010-05       Impact factor: 9.319

4.  The prevalence and severity of depressive symptoms along the spectrum of unipolar depressive disorders: a post hoc analysis.

Authors:  Jeffrey J Rakofsky; Pamela J Schettler; Becky L Kinkead; Ellen Frank; Lewis L Judd; David J Kupfer; A John Rush; Michael E Thase; Kimberly A Yonkers; Mark H Rapaport
Journal:  J Clin Psychiatry       Date:  2013-11       Impact factor: 4.384

5.  Systemic oxidatively generated DNA/RNA damage in clinical depression: associations to symptom severity and response to electroconvulsive therapy.

Authors:  Anders Jorgensen; Jesper Krogh; Kamilla Miskowiak; Tom G Bolwig; Lars V Kessing; Anders Fink-Jensen; Merete Nordentoft; Trine Henriksen; Allan Weimann; Henrik E Poulsen; Martin B Jorgensen
Journal:  J Affect Disord       Date:  2013-03-13       Impact factor: 4.839

6.  Gender differences in heritability of depressive symptoms in the elderly.

Authors:  M Jansson; M Gatz; S Berg; B Johansson; B Malmberg; G E McClearn; M Schalling; N L Pedersen
Journal:  Psychol Med       Date:  2004-04       Impact factor: 7.723

7.  Family study of subthreshold depressive symptoms: risk factor for MDD?

Authors:  Peter M Lewinsohn; Daniel N Klein; Emily C Durbin; John R Seeley; Paul Rohde
Journal:  J Affect Disord       Date:  2003-11       Impact factor: 4.839

Review 8.  Subthreshold depression as a risk indicator for major depressive disorder: a systematic review of prospective studies.

Authors:  P Cuijpers; F Smit
Journal:  Acta Psychiatr Scand       Date:  2004-05       Impact factor: 6.392

9.  Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.

Authors:  S I Shyn; J Shi; J B Kraft; J B Potash; J A Knowles; M M Weissman; H A Garriock; J S Yokoyama; P J McGrath; E J Peters; W A Scheftner; W Coryell; W B Lawson; D Jancic; P V Gejman; A R Sanders; P Holmans; S L Slager; D F Levinson; S P Hamilton
Journal:  Mol Psychiatry       Date:  2009-12-29       Impact factor: 15.992

10.  Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs.

Authors:  S Hong Lee; Stephan Ripke; Benjamin M Neale; Stephen V Faraone; Shaun M Purcell; Roy H Perlis; Bryan J Mowry; Anita Thapar; Michael E Goddard; John S Witte; Devin Absher; Ingrid Agartz; Huda Akil; Farooq Amin; Ole A Andreassen; Adebayo Anjorin; Richard Anney; Verneri Anttila; Dan E Arking; Philip Asherson; Maria H Azevedo; Lena Backlund; Judith A Badner; Anthony J Bailey; Tobias Banaschewski; Jack D Barchas; Michael R Barnes; Thomas B Barrett; Nicholas Bass; Agatino Battaglia; Michael Bauer; Mònica Bayés; Frank Bellivier; Sarah E Bergen; Wade Berrettini; Catalina Betancur; Thomas Bettecken; Joseph Biederman; Elisabeth B Binder; Donald W Black; Douglas H R Blackwood; Cinnamon S Bloss; Michael Boehnke; Dorret I Boomsma; Gerome Breen; René Breuer; Richard Bruggeman; Paul Cormican; Nancy G Buccola; Jan K Buitelaar; William E Bunney; Joseph D Buxbaum; William F Byerley; Enda M Byrne; Sian Caesar; Wiepke Cahn; Rita M Cantor; Miguel Casas; Aravinda Chakravarti; Kimberly Chambert; Khalid Choudhury; Sven Cichon; C Robert Cloninger; David A Collier; Edwin H Cook; Hilary Coon; Bru Cormand; Aiden Corvin; William H Coryell; David W Craig; Ian W Craig; Jennifer Crosbie; Michael L Cuccaro; David Curtis; Darina Czamara; Susmita Datta; Geraldine Dawson; Richard Day; Eco J De Geus; Franziska Degenhardt; Srdjan Djurovic; Gary J Donohoe; Alysa E Doyle; Jubao Duan; Frank Dudbridge; Eftichia Duketis; Richard P Ebstein; Howard J Edenberg; Josephine Elia; Sean Ennis; Bruno Etain; Ayman Fanous; Anne E Farmer; I Nicol Ferrier; Matthew Flickinger; Eric Fombonne; Tatiana Foroud; Josef Frank; Barbara Franke; Christine Fraser; Robert Freedman; Nelson B Freimer; Christine M Freitag; Marion Friedl; Louise Frisén; Louise Gallagher; Pablo V Gejman; Lyudmila Georgieva; Elliot S Gershon; Daniel H Geschwind; Ina Giegling; Michael Gill; Scott D Gordon; Katherine Gordon-Smith; Elaine K Green; Tiffany A Greenwood; Dorothy E Grice; Magdalena Gross; Detelina Grozeva; Weihua Guan; Hugh Gurling; Lieuwe De Haan; Jonathan L Haines; Hakon Hakonarson; Joachim Hallmayer; Steven P Hamilton; Marian L Hamshere; Thomas F Hansen; Annette M Hartmann; Martin Hautzinger; Andrew C Heath; Anjali K Henders; Stefan Herms; Ian B Hickie; Maria Hipolito; Susanne Hoefels; Peter A Holmans; Florian Holsboer; Witte J Hoogendijk; Jouke-Jan Hottenga; Christina M Hultman; Vanessa Hus; Andrés Ingason; Marcus Ising; Stéphane Jamain; Edward G Jones; Ian Jones; Lisa Jones; Jung-Ying Tzeng; Anna K Kähler; René S Kahn; Radhika Kandaswamy; Matthew C Keller; James L Kennedy; Elaine Kenny; Lindsey Kent; Yunjung Kim; George K Kirov; Sabine M Klauck; Lambertus Klei; James A Knowles; Martin A Kohli; Daniel L Koller; Bettina Konte; Ania Korszun; Lydia Krabbendam; Robert Krasucki; Jonna Kuntsi; Phoenix Kwan; Mikael Landén; Niklas Långström; Mark Lathrop; Jacob Lawrence; William B Lawson; Marion Leboyer; David H Ledbetter; Phil H Lee; Todd Lencz; Klaus-Peter Lesch; Douglas F Levinson; Cathryn M Lewis; Jun Li; Paul Lichtenstein; Jeffrey A Lieberman; Dan-Yu Lin; Don H Linszen; Chunyu Liu; Falk W Lohoff; Sandra K Loo; Catherine Lord; Jennifer K Lowe; Susanne Lucae; Donald J MacIntyre; Pamela A F Madden; Elena Maestrini; Patrik K E Magnusson; Pamela B Mahon; Wolfgang Maier; Anil K Malhotra; Shrikant M Mane; Christa L Martin; Nicholas G Martin; Manuel Mattheisen; Keith Matthews; Morten Mattingsdal; Steven A McCarroll; Kevin A McGhee; James J McGough; Patrick J McGrath; Peter McGuffin; Melvin G McInnis; Andrew McIntosh; Rebecca McKinney; Alan W McLean; Francis J McMahon; William M McMahon; Andrew McQuillin; Helena Medeiros; Sarah E Medland; Sandra Meier; Ingrid Melle; Fan Meng; Jobst Meyer; Christel M Middeldorp; Lefkos Middleton; Vihra Milanova; Ana Miranda; Anthony P Monaco; Grant W Montgomery; Jennifer L Moran; Daniel Moreno-De-Luca; Gunnar Morken; Derek W Morris; Eric M Morrow; Valentina Moskvina; Pierandrea Muglia; Thomas W Mühleisen; Walter J Muir; Bertram Müller-Myhsok; Michael Murtha; Richard M Myers; Inez Myin-Germeys; Michael C Neale; Stan F Nelson; Caroline M Nievergelt; Ivan Nikolov; Vishwajit Nimgaonkar; Willem A Nolen; Markus M Nöthen; John I Nurnberger; Evaristus A Nwulia; Dale R Nyholt; Colm O'Dushlaine; Robert D Oades; Ann Olincy; Guiomar Oliveira; Line Olsen; Roel A Ophoff; Urban Osby; Michael J Owen; Aarno Palotie; Jeremy R Parr; Andrew D Paterson; Carlos N Pato; Michele T Pato; Brenda W Penninx; Michele L Pergadia; Margaret A Pericak-Vance; Benjamin S Pickard; Jonathan Pimm; Joseph Piven; Danielle Posthuma; James B Potash; Fritz Poustka; Peter Propping; Vinay Puri; Digby J Quested; Emma M Quinn; Josep Antoni Ramos-Quiroga; Henrik B Rasmussen; Soumya Raychaudhuri; Karola Rehnström; Andreas Reif; Marta Ribasés; John P Rice; Marcella Rietschel; Kathryn Roeder; Herbert Roeyers; Lizzy Rossin; Aribert Rothenberger; Guy Rouleau; Douglas Ruderfer; Dan Rujescu; Alan R Sanders; Stephan J Sanders; Susan L Santangelo; Joseph A Sergeant; Russell Schachar; Martin Schalling; Alan F Schatzberg; William A Scheftner; Gerard D Schellenberg; Stephen W Scherer; Nicholas J Schork; Thomas G Schulze; Johannes Schumacher; Markus Schwarz; Edward Scolnick; Laura J Scott; Jianxin Shi; Paul D Shilling; Stanley I Shyn; Jeremy M Silverman; Susan L Slager; Susan L Smalley; Johannes H Smit; Erin N Smith; Edmund J S Sonuga-Barke; David St Clair; Matthew State; Michael Steffens; Hans-Christoph Steinhausen; John S Strauss; Jana Strohmaier; T Scott Stroup; James S Sutcliffe; Peter Szatmari; Szabocls Szelinger; Srinivasa Thirumalai; Robert C Thompson; Alexandre A Todorov; Federica Tozzi; Jens Treutlein; Manfred Uhr; Edwin J C G van den Oord; Gerard Van Grootheest; Jim Van Os; Astrid M Vicente; Veronica J Vieland; John B Vincent; Peter M Visscher; Christopher A Walsh; Thomas H Wassink; Stanley J Watson; Myrna M Weissman; Thomas Werge; Thomas F Wienker; Ellen M Wijsman; Gonneke Willemsen; Nigel Williams; A Jeremy Willsey; Stephanie H Witt; Wei Xu; Allan H Young; Timothy W Yu; Stanley Zammit; Peter P Zandi; Peng Zhang; Frans G Zitman; Sebastian Zöllner; Bernie Devlin; John R Kelsoe; Pamela Sklar; Mark J Daly; Michael C O'Donovan; Nicholas Craddock; Patrick F Sullivan; Jordan W Smoller; Kenneth S Kendler; Naomi R Wray
Journal:  Nat Genet       Date:  2013-08-11       Impact factor: 38.330

View more
  26 in total

Review 1.  Pharmacogenomics in the treatment of mood disorders: Strategies and Opportunities for personalized psychiatry.

Authors:  Azmeraw T Amare; Klaus Oliver Schubert; Bernhard T Baune
Journal:  EPMA J       Date:  2017-09-05       Impact factor: 6.543

2.  The Rotterdam Study: 2018 update on objectives, design and main results.

Authors:  M Arfan Ikram; Guy G O Brusselle; Sarwa Darwish Murad; Cornelia M van Duijn; Oscar H Franco; André Goedegebure; Caroline C W Klaver; Tamar E C Nijsten; Robin P Peeters; Bruno H Stricker; Henning Tiemeier; André G Uitterlinden; Meike W Vernooij; Albert Hofman
Journal:  Eur J Epidemiol       Date:  2017-10-24       Impact factor: 8.082

Review 3.  Post-GWAS in Psychiatric Genetics: A Developmental Perspective on the "Other" Next Steps.

Authors:  Danielle M Dick; Peter B Barr; Seung Bin Cho; Megan E Cooke; Sally I-Chun Kuo; Tenesha J Lewis; Zoe Neale; Jessica E Salvatore; Jeanne Savage; Jinni Su
Journal:  Genes Brain Behav       Date:  2018-02-05       Impact factor: 3.449

4.  Genome-wide association study of depressive symptoms in the Hispanic Community Health Study/Study of Latinos.

Authors:  Erin C Dunn; Tamar Sofer; Min-Jung Wang; Thomas W Soare; Linda C Gallo; Stephanie M Gogarten; Kathleen F Kerr; Chia-Yen Chen; Murray B Stein; Robert J Ursano; Xiuqing Guo; Yucheng Jia; Jie Yao; Jerome I Rotter; Maria Argos; Jianwen Cai; Krista Perreira; Sylvia Wassertheil-Smoller; Jordan W Smoller
Journal:  J Psychiatr Res       Date:  2017-12-16       Impact factor: 4.791

5.  Imaging genetics paradigms in depression research: Systematic review and meta-analysis.

Authors:  Lícia P Pereira; Cristiano A Köhler; Brendon Stubbs; Kamilla W Miskowiak; Gerwyn Morris; Bárbara P de Freitas; Trevor Thompson; Brisa S Fernandes; André R Brunoni; Michael Maes; Diego A Pizzagalli; André F Carvalho
Journal:  Prog Neuropsychopharmacol Biol Psychiatry       Date:  2018-05-17       Impact factor: 5.067

Review 6.  Genetics Factors in Major Depression Disease.

Authors:  Maria Shadrina; Elena A Bondarenko; Petr A Slominsky
Journal:  Front Psychiatry       Date:  2018-07-23       Impact factor: 4.157

7.  DNA Methylation Signatures of Depressive Symptoms in Middle-aged and Elderly Persons: Meta-analysis of Multiethnic Epigenome-wide Studies.

Authors:  Olivera Story Jovanova; Ivana Nedeljkovic; Derek Spieler; Rosie M Walker; Chunyu Liu; Michelle Luciano; Jan Bressler; Jennifer Brody; Amanda J Drake; Kathryn L Evans; Rahul Gondalia; Sonja Kunze; Brigitte Kuhnel; Jari Lahti; Rozenn N Lemaitre; Riccardo E Marioni; Brenton Swenson; Jayandra Jung Himali; Hongsheng Wu; Yun Li; Allan F McRae; Tom C Russ; James Stewart; Zhiying Wang; Guosheng Zhang; Karl-Heinz Ladwig; Andre G Uitterlinden; Xiuqing Guo; Annette Peters; Katri Räikkönen; John M Starr; Melanie Waldenberger; Naomi R Wray; Eric A Whitsel; Nona Sotoodehnia; Sudha Seshadri; David J Porteous; Joyce van Meurs; Thomas H Mosley; Andrew M McIntosh; Michael M Mendelson; Daniel Levy; Lifang Hou; Johan G Eriksson; Myriam Fornage; Ian J Deary; Andrea Baccarelli; Henning Tiemeier; Najaf Amin
Journal:  JAMA Psychiatry       Date:  2018-09-01       Impact factor: 21.596

Review 8.  Uncovering the Genetic Architecture of Major Depression.

Authors:  Andrew M McIntosh; Patrick F Sullivan; Cathryn M Lewis
Journal:  Neuron       Date:  2019-04-03       Impact factor: 17.173

9.  Association of etiological factors across the extreme end and continuous variation in disordered eating in female Swedish twins.

Authors:  Lisa Dinkler; Mark J Taylor; Maria Råstam; Nouchine Hadjikhani; Cynthia M Bulik; Paul Lichtenstein; Christopher Gillberg; Sebastian Lundström
Journal:  Psychol Med       Date:  2019-12-17       Impact factor: 7.723

10.  Minimal phenotyping yields genome-wide association signals of low specificity for major depression.

Authors:  Na Cai; Joana A Revez; Mark J Adams; Till F M Andlauer; Gerome Breen; Enda M Byrne; Toni-Kim Clarke; Andreas J Forstner; Hans J Grabe; Steven P Hamilton; Douglas F Levinson; Cathryn M Lewis; Glyn Lewis; Nicholas G Martin; Yuri Milaneschi; Ole Mors; Bertram Müller-Myhsok; Brenda W J H Penninx; Roy H Perlis; Giorgio Pistis; James B Potash; Martin Preisig; Jianxin Shi; Jordan W Smoller; Fabien Streit; Henning Tiemeier; Rudolf Uher; Sandra Van der Auwera; Alexander Viktorin; Myrna M Weissman; Kenneth S Kendler; Jonathan Flint
Journal:  Nat Genet       Date:  2020-03-30       Impact factor: 38.330

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.