Literature DB >> 28042700

A Versatile Approach for Site-Specific Lysine Acylation in Proteins.

Zhipeng A Wang1, Yadagiri Kurra1, Xin Wang2, Yu Zeng1, Yan-Jiun Lee1, Vangmayee Sharma1, Hening Lin3, Susie Y Dai2, Wenshe R Liu1.   

Abstract

Using amber suppression in coordination with a mutant pyrrolysyl-tRNA synthetase-tRNAPyl pair, azidonorleucine is genetically encoded in E. coli. Its genetic incorporation followed by traceless Staudinger ligation with a phosphinothioester allows the convenient synthesis of a protein with a site-specifically installed lysine acylation. By simply changing the phosphinothioester identity, any lysine acylation type could be introduced. Using this approach, we demonstrated that both lysine acetylation and lysine succinylation can be installed selectively in ubiquitin and synthesized histone H3 with succinylation at its K4 position (H3K4su). Using an H3K4su-H4 tetramer as a substrate, we further confirmed that Sirt5 is an active histone desuccinylase. Lysine succinylation is a recently identified post-translational modification. The reported technique makes it possible to explicate regulatory functions of this modification in proteins.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  amber suppression; azidonorleucine; lysine acylation; protein modification; traceless Staudinger ligation

Mesh:

Substances:

Year:  2017        PMID: 28042700      PMCID: PMC5550319          DOI: 10.1002/anie.201611415

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  38 in total

1.  Mechanistic investigation of the staudinger ligation.

Authors:  Fiona L Lin; Helen M Hoyt; Herman van Halbeek; Robert G Bergman; Carolyn R Bertozzi
Journal:  J Am Chem Soc       Date:  2005-03-02       Impact factor: 15.419

Review 2.  Acetylation of non-histone proteins modulates cellular signalling at multiple levels.

Authors:  Stephanie Spange; Tobias Wagner; Thorsten Heinzel; Oliver H Krämer
Journal:  Int J Biochem Cell Biol       Date:  2008-09-02       Impact factor: 5.085

3.  Expanding the genetic code of Escherichia coli.

Authors:  L Wang; A Brock; B Herberich; P G Schultz
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

4.  Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification.

Authors:  Minjia Tan; Hao Luo; Sangkyu Lee; Fulai Jin; Jeong Soo Yang; Emilie Montellier; Thierry Buchou; Zhongyi Cheng; Sophie Rousseaux; Nisha Rajagopal; Zhike Lu; Zhen Ye; Qin Zhu; Joanna Wysocka; Yang Ye; Saadi Khochbin; Bing Ren; Yingming Zhao
Journal:  Cell       Date:  2011-09-16       Impact factor: 41.582

5.  Traceless Staudinger acetylation of azides in aqueous buffers.

Authors:  Sylwia Sowa; Michaela Mühlberg; K Michal Pietrusiewicz; Christian P R Hackenberger
Journal:  Bioorg Med Chem       Date:  2013-03-07       Impact factor: 3.641

6.  A general approach for the generation of orthogonal tRNAs.

Authors:  L Wang; P G Schultz
Journal:  Chem Biol       Date:  2001-09

7.  Water-soluble phosphinothiols for traceless staudinger ligation and integration with expressed protein ligation.

Authors:  Annie Tam; Matthew B Soellner; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2007-08-22       Impact factor: 15.419

8.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  The site-specific installation of methyl-lysine analogs into recombinant histones.

Authors:  Matthew D Simon; Feixia Chu; Lisa R Racki; Cecile C de la Cruz; Alma L Burlingame; Barbara Panning; Geeta J Narlikar; Kevan M Shokat
Journal:  Cell       Date:  2007-03-09       Impact factor: 41.582

10.  Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.

Authors:  Jintang Du; Yeyun Zhou; Xiaoyang Su; Jiu Jiu Yu; Saba Khan; Hong Jiang; Jungwoo Kim; Jimin Woo; Jun Huyn Kim; Brian Hyun Choi; Bin He; Wei Chen; Sheng Zhang; Richard A Cerione; Johan Auwerx; Quan Hao; Hening Lin
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

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  18 in total

1.  Engineered Aminoacyl-tRNA Synthetases with Improved Selectivity toward Noncanonical Amino Acids.

Authors:  Hui Si Kwok; Oscar Vargas-Rodriguez; Sergey V Melnikov; Dieter Söll
Journal:  ACS Chem Biol       Date:  2019-04-09       Impact factor: 5.100

Review 2.  Chemical biology approaches for studying posttranslational modifications.

Authors:  Aerin Yang; Kyukwang Cho; Hee-Sung Park
Journal:  RNA Biol       Date:  2017-09-21       Impact factor: 4.652

3.  The Pyrrolysyl-tRNA Synthetase Activity can be Improved by a P188 Mutation that Stabilizes the Full-Length Enzyme.

Authors:  Chia-Chuan Cho; Lauren R Blankenship; Xinyu Ma; Shiqing Xu; Wenshe Liu
Journal:  J Mol Biol       Date:  2022-01-13       Impact factor: 6.151

Review 4.  The Chemical Biology of Reversible Lysine Post-translational Modifications.

Authors:  Zhipeng A Wang; Philip A Cole
Journal:  Cell Chem Biol       Date:  2020-07-21       Impact factor: 8.116

5.  Methods and Applications of Expressed Protein Ligation.

Authors:  Zhipeng A Wang; Philip A Cole
Journal:  Methods Mol Biol       Date:  2020

Review 6.  Playing with the Molecules of Life.

Authors:  Douglas D Young; Peter G Schultz
Journal:  ACS Chem Biol       Date:  2018-03-02       Impact factor: 5.100

Review 7.  Expanding and reprogramming the genetic code.

Authors:  Jason W Chin
Journal:  Nature       Date:  2017-10-04       Impact factor: 49.962

8.  Site-Specific Conversion of Cysteine in a Protein to Dehydroalanine Using 2-Nitro-5-thiocyanatobenzoic Acid.

Authors:  Yuchen Qiao; Ge Yu; Sunshine Z Leeuwon; Wenshe Ray Liu
Journal:  Molecules       Date:  2021-04-29       Impact factor: 4.411

Review 9.  Chemogenetic and optogenetic control of post-translational modifications through genetic code expansion.

Authors:  Wenyuan Zhou; Alexander Deiters
Journal:  Curr Opin Chem Biol       Date:  2021-04-09       Impact factor: 8.972

10.  DNAzymes for amine and peptide lysine acylation.

Authors:  Tianjiong Yao; Jack J Przybyla; Peter Yeh; Austin M Woodard; Hannah J Nilsson; Benjamin M Brandsen; Scott K Silverman
Journal:  Org Biomol Chem       Date:  2021-01-06       Impact factor: 3.876

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