Literature DB >> 28039207

Nup358 binds to AGO proteins through its SUMO-interacting motifs and promotes the association of target mRNA with miRISC.

Manas Ranjan Sahoo1, Swati Gaikwad1, Deepak Khuperkar1, Maitreyi Ashok1, Mary Helen1, Santosh Kumar Yadav1, Aditi Singh1, Indrasen Magre1, Prachi Deshmukh1, Supriya Dhanvijay1, Pabitra Kumar Sahoo1, Yogendra Ramtirtha2, Mallur Srivatsan Madhusudhan2, Pananghat Gayathri2, Vasudevan Seshadri1, Jomon Joseph3.   

Abstract

MicroRNA (miRNA)-guided mRNA repression, mediated by the miRNA-induced silencing complex (miRISC), is an important component of post-transcriptional gene silencing. However, how miRISC identifies the target mRNA in vivo is not well understood. Here, we show that the nucleoporin Nup358 plays an important role in this process. Nup358 localizes to the nuclear pore complex and to the cytoplasmic annulate lamellae (AL), and these structures dynamically associate with two mRNP granules: processing bodies (P bodies) and stress granules (SGs). Nup358 depletion disrupts P bodies and concomitantly impairs the miRNA pathway. Furthermore, Nup358 interacts with AGO and GW182 proteins and promotes the association of target mRNA with miRISC A well-characterized SUMO-interacting motif (SIM) in Nup358 is sufficient for Nup358 to directly bind to AGO proteins. Moreover, AGO and PIWI proteins interact with SIMs derived from other SUMO-binding proteins. Our study indicates that Nup358-AGO interaction is important for miRNA-mediated gene silencing and identifies SIM as a new interacting motif for the AGO family of proteins. The findings also support a model wherein the coupling of miRISC with the target mRNA could occur at AL, specialized domains within the ER, and at the nuclear envelope.
© 2016 The Authors.

Entities:  

Keywords:  Argonaute; Nup358; annulate lamellae; miRNA; nucleoporin

Mesh:

Substances:

Year:  2016        PMID: 28039207      PMCID: PMC5286382          DOI: 10.15252/embr.201642386

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  90 in total

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4.  Specification of SUMO1- and SUMO2-interacting motifs.

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Journal:  FEBS Lett       Date:  2007-12-10       Impact factor: 4.124

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Journal:  Cell       Date:  2008-04-04       Impact factor: 41.582

7.  Insights into E3 ligase activity revealed by a SUMO-RanGAP1-Ubc9-Nup358 complex.

Authors:  David Reverter; Christopher D Lima
Journal:  Nature       Date:  2005-06-02       Impact factor: 49.962

8.  Stress granules and processing bodies are dynamically linked sites of mRNP remodeling.

Authors:  Nancy Kedersha; Georg Stoecklin; Maranatha Ayodele; Patrick Yacono; Jens Lykke-Andersen; Marvin J Fritzler; Donalyn Scheuner; Randal J Kaufman; David E Golan; Paul Anderson
Journal:  J Cell Biol       Date:  2005-06-20       Impact factor: 10.539

9.  The rough endoplasmatic reticulum is a central nucleation site of siRNA-mediated RNA silencing.

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  13 in total

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Journal:  Small GTPases       Date:  2017-09-29

2.  Nup358 binds to AGO proteins through its SUMO-interacting motifs and promotes the association of target mRNA with miRISC.

Authors:  Manas Ranjan Sahoo; Swati Gaikwad; Deepak Khuperkar; Maitreyi Ashok; Mary Helen; Santosh Kumar Yadav; Aditi Singh; Indrasen Magre; Prachi Deshmukh; Supriya Dhanvijay; Pabitra Kumar Sahoo; Yogendra Ramtirtha; Mallur Srivatsan Madhusudhan; Pananghat Gayathri; Vasudevan Seshadri; Jomon Joseph
Journal:  EMBO Rep       Date:  2016-12-30       Impact factor: 8.807

3.  RanGTPase links nucleo-cytoplasmic transport to the recruitment of cargoes into small extracellular vesicles.

Authors:  Sakalya Chavan; Deepak Khuperkar; Akshay Lonare; Swagatika Panigrahi; Jayesh Bellare; Srikanth Rapole; Vasudevan Seshadri; Jomon Joseph
Journal:  Cell Mol Life Sci       Date:  2022-07-02       Impact factor: 9.207

4.  ROCK-dependent phosphorylation of NUP62 regulates p63 nuclear transport and squamous cell carcinoma proliferation.

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Journal:  EMBO Rep       Date:  2017-12-07       Impact factor: 8.807

5.  Farnesylated heat shock protein 40 is a component of membrane-bound RISC in Arabidopsis.

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6.  RanBP2/Nup358 enhances miRNA activity by sumoylating Argonautes.

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Journal:  PLoS Genet       Date:  2021-02-18       Impact factor: 5.917

Review 7.  Roles of Nucleoporin RanBP2/Nup358 in Acute Necrotizing Encephalopathy Type 1 (ANE1) and Viral Infection.

Authors:  Jing Jiang; Yifan E Wang; Alexander F Palazzo; Qingtang Shen
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8.  Epstein-Barr Virus BGLF2 commandeers RISC to interfere with cellular miRNA function.

Authors:  Ashley M Campbell; Carlos F De La Cruz-Herrera; Edyta Marcon; Jack Greenblatt; Lori Frappier
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Review 9.  Intracytoplasmic Re-localization of miRISC Complexes.

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Journal:  Front Genet       Date:  2018-09-20       Impact factor: 4.599

Review 10.  Clinical Manifestations and Pathogenesis of Acute Necrotizing Encephalopathy: The Interface Between Systemic Infection and Neurologic Injury.

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Journal:  Front Neurol       Date:  2022-01-04       Impact factor: 4.003

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