| Literature DB >> 28009816 |
Adam J Johnson1, Ming J Wu2,3.
Abstract
The pleiotropic serine/threonine protein kinase CK2 was the first kinase discovered. It is renowned for its role in cell proliferation and anti-apoptosis. The complexity of this kinase is well reflected by the findings of past decades in terms of its heterotetrameric structure, subcellular location, constitutive activity and the extensive catalogue of substrates. With the advent of non-biased high-throughput functional genomics such as genome-wide deletion mutant screening, novel aspects of CK2 functionality have been revealed. Our recent discoveries using the model organism Saccharomyces cerevisiae and mammalian cells demonstrate that CK2 regulates metal toxicity. Extensive literature search reveals that there are few but elegant works on the role of CK2 in regulating the sodium and zinc channels. As both CK2 and metal ions are key players in cell biology and oncogenesis, understanding the details of CK2's regulation of metal ion homeostasis has a direct bearing on cancer research. In this review, we aim to garner the recent data and gain insights into the role of CK2 in metal ion transport.Entities:
Keywords: genome-wide screen; metal ion transport; metal toxicity; protein kinase CK2; therapeutic targets; zinc channels
Year: 2016 PMID: 28009816 PMCID: PMC5198054 DOI: 10.3390/ph9040080
Source DB: PubMed Journal: Pharmaceuticals (Basel) ISSN: 1424-8247
Phosphorylated sites predicted in the zinc channels.
| Protein | Site | Exemplar Sequence | Score | Location of Phosphorylation Site |
|---|---|---|---|---|
| ZIP1 | None | - | - | - |
| ZIP2 | S87 | MVQNRSASERNSSGD | 10.179 | Extracellular |
| ZIP2 | S91 | RSASERNSSGDADSA | 15.628 | Extracellular |
| ZIP3 | S125 | LETFNAGSDVGSDSE | 10.216 | Cytoplasmic |
| ZIP3 | S129 | NAGSDVGSDSEYESP | 16.602 | Cytoplasmic |
| ZIP3 | S131 | GSDVGSDSEYESPFM | 12.602 | Cytoplasmic |
| ZIP4 | None | - | - | - |
| ZIP5 | None | - | - | - |
| ZIP6 | S100 | HHDHDHHSDHEHHSD | 11.864 | Extracellular |
| ZIP6 | S106 | HSDHEHHSDHERHSD | 12.672 | Extracellular |
| ZIP6 | S112 | HSDHERHSDHEHHSE | 12.662 | Extracellular |
| ZIP6 | S118 | HSDHEHHSEHEHHSD | 12.807 | Extracellular |
| ZIP6 | S124 | HSEHEHHSDHDHHSH | 12.309 | Extracellular |
| ZIP6 | S183 | RNVKDSVSASEVTST | 10.324 | Extracellular |
| ZIP7 | S275 | RSTKEKQSSEEEEKE | 16.548 | Cytoplasmic |
| ZIP7 | S276 | RSTKEKQSSEEEEKE | 16.548 | Cytoplasmic |
| ZIP8 | None | - | - | - |
| ZIP9 | S132 | IGNSHVHSTDDPEAA | 11.066 | Cytoplasmic |
| ZIP10 | None | - | - | - |
| ZIP11 | None | - | - | - |
| ZIP12 | S160 | DEDSSFLSQNETEDI | 10.412 | Extracellular |
| ZIP12 | S197 | KKSGIVSSEGANEST | 10.888 | Extracellular |
| ZIP12 | S293 | QDYSNFSSSMEKESE | 11.826 | Cytoplasmic |
| ZIP12 | S497 | LALNSELSDQAGRGK | 9.983 | Extracellular |
| ZIP12 | S565 | AIGAAFSSSSESGVT | 10.276 | Cytoplasmic |
| ZIP12 | S567 | GAAFSSSSESGVTTT | 10.409 | Cytoplasmic |
| ZIP13 | None | - | - | - |
| ZIP14 | None | - | - | - |
| ZNT1 | None | - | - | - |
| ZNT2 | S322 | CQACQGPSD | 10.147 | Cytoplasmic |
| ZNT3 | S341 | SAHLAIDSTADPEAV | 9.921 | Cytoplasmic |
| ZNT4 | S32 | DTSAFDFSDEAGDEG | 13.229 | Cytoplasmic |
| ZNT5 | None | - | - | - |
| ZNT6 | None | - | - | - |
| ZNT7 | None | - | - | - |
| ZNT8 | S353 | SLTIQMESPVDQDPD | 10.017 | Cytoplasmic |
| ZNT9 | None | - | - | - |
| ZNT10 | S446 | TYGSDGLSRRDAREV | 11.562 | Cytoplasmic |
Note: The protein sequence of each zinc channel was analysed for phosphorylation by CK2 using GPS3.0 software [83], using the high threshold option (reported false positive rate of <2%). This threshold correlates with a cut-off value of 9.84. The table shows the predicted residue position, the sequence, the score (higher score means more likely to be phosphorylated) and the location of the predicted phosphorylation sites.
Figure 1Schematic view of the phosphorylation sites in ZIP and ZnT channels predicted to be phosphorylated by CK2. CK2 phosphorylation sites were predicted using GPS 3.0 software. Transmembrane domains are identified according to Uniprot (http://www.uniprot.org) and the original publications for ZIP2 [84], ZIP3 [84], ZIP6 [84,85], ZIP7 [84,85], ZIP9, ZIP12 [86]. The six TM domains of ZnT2, 3, 4, 8 and 10 are based on an atomic-resolution structure of YiiP [87,88]. TM denotes transmembrane (blue), E for extracellular (red), C for cytoplasmic (green), IO for intra-organellar, S for serine.