Literature DB >> 27989441

Autonomous Metabolic Oscillations Robustly Gate the Early and Late Cell Cycle.

Alexandros Papagiannakis1, Bastian Niebel1, Ernst C Wit2, Matthias Heinemann3.   

Abstract

Eukaryotic cell division is known to be controlled by the cyclin/cyclin dependent kinase (CDK) machinery. However, eukaryotes have evolved prior to CDKs, and cells can divide in the absence of major cyclin/CDK components. We hypothesized that an autonomous metabolic oscillator provides dynamic triggers for cell-cycle initiation and progression. Using microfluidics, cell-cycle reporters, and single-cell metabolite measurements, we found that metabolism of budding yeast is a CDK-independent oscillator that oscillates across different growth conditions, both in synchrony with and also in the absence of the cell cycle. Using environmental perturbations and dynamic single-protein depletion experiments, we found that the metabolic oscillator and the cell cycle form a system of coupled oscillators, with the metabolic oscillator separately gating and maintaining synchrony with the early and late cell cycle. Establishing metabolism as a dynamic component within the cell-cycle network opens new avenues for cell-cycle research and therapeutic interventions for proliferative disorders.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  FRET sensor; NAD(P)H; Saccharomyces cerevisiae; cell cycle; coupled oscillators; cyclin/CDK machinery; metabolic oscillations; microfluidics; single cell; yeast metabolic cycle

Mesh:

Substances:

Year:  2016        PMID: 27989441     DOI: 10.1016/j.molcel.2016.11.018

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  37 in total

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Authors:  Avia Mizrachi; Shiri Graff van Creveld; Orr H Shapiro; Shilo Rosenwasser; Assaf Vardi
Journal:  Elife       Date:  2019-06-24       Impact factor: 8.140

2.  Heat Oscillations Driven by the Embryonic Cell Cycle Reveal the Energetic Costs of Signaling.

Authors:  Jonathan Rodenfels; Karla M Neugebauer; Jonathon Howard
Journal:  Dev Cell       Date:  2019-01-31       Impact factor: 12.270

3.  Putting microfluidics in other people's hands.

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Journal:  Nat Methods       Date:  2018-02-28       Impact factor: 28.547

4.  Mapping Metabolic Events in the Cancer Cell Cycle Reveals Arginine Catabolism in the Committed SG2M Phase.

Authors:  Irena Roci; Jeramie D Watrous; Kim A Lagerborg; Lorenzo Lafranchi; Arne Lindqvist; Mohit Jain; Roland Nilsson
Journal:  Cell Rep       Date:  2019-02-12       Impact factor: 9.423

5.  Origin of exponential growth in nonlinear reaction networks.

Authors:  Wei-Hsiang Lin; Edo Kussell; Lai-Sang Young; Christine Jacobs-Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-22       Impact factor: 11.205

6.  Differential scaling between G1 protein production and cell size dynamics promotes commitment to the cell division cycle in budding yeast.

Authors:  Athanasios Litsios; Daphne H E W Huberts; Hanna M Terpstra; Paolo Guerra; Alexander Schmidt; Katarzyna Buczak; Alexandros Papagiannakis; Mattia Rovetta; Johan Hekelaar; Georg Hubmann; Marten Exterkate; Andreas Milias-Argeitis; Matthias Heinemann
Journal:  Nat Cell Biol       Date:  2019-11-04       Impact factor: 28.824

7.  Physical bioenergetics: Energy fluxes, budgets, and constraints in cells.

Authors:  Xingbo Yang; Matthias Heinemann; Jonathon Howard; Greg Huber; Srividya Iyer-Biswas; Guillaume Le Treut; Michael Lynch; Kristi L Montooth; Daniel J Needleman; Simone Pigolotti; Jonathan Rodenfels; Pierre Ronceray; Sadasivan Shankar; Iman Tavassoly; Shashi Thutupalli; Denis V Titov; Jin Wang; Peter J Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-29       Impact factor: 11.205

Review 8.  Gene Regulation and Cellular Metabolism: An Essential Partnership.

Authors:  Richard W Carthew
Journal:  Trends Genet       Date:  2020-10-19       Impact factor: 11.639

9.  Peroxiredoxins couple metabolism and cell division in an ultradian cycle.

Authors:  Prince Saforo Amponsah; Galal Yahya; Jannik Zimmermann; Marie Mai; Sarah Mergel; Timo Mühlhaus; Zuzana Storchova; Bruce Morgan
Journal:  Nat Chem Biol       Date:  2021-02-11       Impact factor: 15.040

10.  Evolution of opposing regulatory interactions underlies the emergence of eukaryotic cell cycle checkpoints.

Authors:  Rosa D Hernansaiz-Ballesteros; Csenge Földi; Luca Cardelli; László G Nagy; Attila Csikász-Nagy
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

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