Literature DB >> 27979656

Master regulators in development: Views from the Drosophila retinal determination and mammalian pluripotency gene networks.

Trevor L Davis1, Ilaria Rebay2.   

Abstract

Among the mechanisms that steer cells to their correct fate during development, master regulatory networks are unique in their sufficiency to trigger a developmental program outside of its normal context. In this review we discuss the key features that underlie master regulatory potency during normal and ectopic development, focusing on two examples, the retinal determination gene network (RDGN) that directs eye development in the fruit fly and the pluripotency gene network (PGN) that maintains cell fate competency in the early mammalian embryo. In addition to the hierarchical transcriptional activation, extensive positive transcriptional feedback, and cooperative protein-protein interactions that enable master regulators to override competing cellular programs, recent evidence suggests that network topology must also be dynamic, with extensive rewiring of the interactions and feedback loops required to navigate the correct sequence of developmental transitions to reach a final fate. By synthesizing the in vivo evidence provided by the RDGN with the extensive mechanistic insight gleaned from the PGN, we highlight the unique regulatory capabilities that continual reorganization into new hierarchies confers on master control networks. We suggest that deeper understanding of such dynamics should be a priority, as accurate spatiotemporal remodeling of network topology will undoubtedly be essential for successful stem cell based therapeutic efforts.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27979656      PMCID: PMC5496713          DOI: 10.1016/j.ydbio.2016.12.005

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  230 in total

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Journal:  Chaos       Date:  2001-03       Impact factor: 3.642

2.  Synergistic activation of the fibroblast growth factor 4 enhancer by Sox2 and Oct-3 depends on protein-protein interactions facilitated by a specific spatial arrangement of factor binding sites.

Authors:  D C Ambrosetti; C Basilico; L Dailey
Journal:  Mol Cell Biol       Date:  1997-11       Impact factor: 4.272

3.  Sine oculis, a member of the SIX family of transcription factors, directs eye formation.

Authors:  Brandon Weasner; Claire Salzer; Justin P Kumar
Journal:  Dev Biol       Date:  2006-11-01       Impact factor: 3.582

4.  c-Myc is dispensable for direct reprogramming of mouse fibroblasts.

Authors:  Marius Wernig; Alexander Meissner; John P Cassady; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2007-12-13       Impact factor: 24.633

Review 5.  Conservation and divergence in developmental networks: a view from Drosophila myogenesis.

Authors:  Lucia Ciglar; Eileen E M Furlong
Journal:  Curr Opin Cell Biol       Date:  2009-11-04       Impact factor: 8.382

6.  Dachshund and eyes absent proteins form a complex and function synergistically to induce ectopic eye development in Drosophila.

Authors:  R Chen; M Amoui; Z Zhang; G Mardon
Journal:  Cell       Date:  1997-12-26       Impact factor: 41.582

7.  Dachshund binds p53 to block the growth of lung adenocarcinoma cells.

Authors:  Ke Chen; Kongming Wu; Shaoxin Cai; Wei Zhang; Jie Zhou; Jing Wang; Adam Ertel; Zhiping Li; Hallgeir Rui; Andrew Quong; Michael P Lisanti; Aydin Tozeren; Ceylan Tanes; Sankar Addya; Michael Gormley; Chenguang Wang; Steven B McMahon; Richard G Pestell
Journal:  Cancer Res       Date:  2013-03-14       Impact factor: 12.701

8.  Zinc-finger paralogues tsh and tio are functionally equivalent during imaginal development in Drosophila and maintain their expression levels through auto- and cross-negative feedback loops.

Authors:  José Bessa; Laura Carmona; Fernando Casares
Journal:  Dev Dyn       Date:  2009-01       Impact factor: 3.780

9.  Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase.

Authors:  Yosef Buganim; Dina A Faddah; Albert W Cheng; Elena Itskovich; Styliani Markoulaki; Kibibi Ganz; Sandy L Klemm; Alexander van Oudenaarden; Rudolf Jaenisch
Journal:  Cell       Date:  2012-09-14       Impact factor: 41.582

10.  Onset of atonal expression in Drosophila retinal progenitors involves redundant and synergistic contributions of Ey/Pax6 and So binding sites within two distant enhancers.

Authors:  Qingxiang Zhou; Tianyi Zhang; Jennifer C Jemc; Yiyun Chen; Rui Chen; Ilaria Rebay; Francesca Pignoni
Journal:  Dev Biol       Date:  2013-11-16       Impact factor: 3.582

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  20 in total

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Authors:  Alexander D Johnson
Journal:  Curr Opin Genet Dev       Date:  2017-11-08       Impact factor: 5.578

2.  Pleiotropy in Drosophila organogenesis: Mechanistic insights from Combgap and the retinal determination gene network.

Authors:  Trevor L Davis; Ilaria Rebay
Journal:  Fly (Austin)       Date:  2017-12-12       Impact factor: 2.160

3.  The PAX-SIX-EYA-DACH network modulates GATA-FOG function in fly hematopoiesis and human erythropoiesis.

Authors:  T Michael Creed; Rajkumar Baldeosingh; Christian L Eberly; Caroline S Schlee; MinJung Kim; Jevon A Cutler; Akhilesh Pandey; Curt I Civin; Nancy G Fossett; Tami J Kingsbury
Journal:  Development       Date:  2020-01-03       Impact factor: 6.868

4.  The timing of cell fate decisions is crucial for initiating pattern formation in the Drosophila eye.

Authors:  Bonnie M Weasner; Justin P Kumar
Journal:  Development       Date:  2022-01-24       Impact factor: 6.868

5.  Brachyury controls Ciona notochord fate as part of a feed-forward network.

Authors:  Wendy M Reeves; Kotaro Shimai; Konner M Winkley; Michael T Veeman
Journal:  Development       Date:  2021-02-05       Impact factor: 6.868

6.  Efficient conversion of human induced pluripotent stem cells into microglia by defined transcription factors.

Authors:  Shih-Wei Chen; Yu-Sheng Hung; Jong-Ling Fuh; Nien-Jung Chen; Yeh-Shiu Chu; Shu-Cian Chen; Ming-Ji Fann; Yu-Hui Wong
Journal:  Stem Cell Reports       Date:  2021-04-08       Impact factor: 7.765

Review 7.  Interspecies chimeras as a platform for exogenic organ production and transplantation.

Authors:  Daniel J Garry; Mary G Garry
Journal:  Exp Biol Med (Maywood)       Date:  2021-06-24

8.  Glass promotes the differentiation of neuronal and non-neuronal cell types in the Drosophila eye.

Authors:  Carolyn A Morrison; Hao Chen; Tiffany Cook; Stuart Brown; Jessica E Treisman
Journal:  PLoS Genet       Date:  2018-01-11       Impact factor: 5.917

9.  New regulators of Drosophila eye development identified from temporal transcriptome changes.

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Journal:  Genetics       Date:  2021-04-15       Impact factor: 4.562

10.  Automated generation of context-specific gene regulatory networks with a weighted approach in Drosophila melanogaster.

Authors:  Leandro Murgas; Sebastian Contreras-Riquelme; J Eduardo Martínez-Hernandez; Camilo Villaman; Rodrigo Santibáñez; Alberto J M Martin
Journal:  Interface Focus       Date:  2021-06-11       Impact factor: 3.906

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