Literature DB >> 27975164

Variants of genes encoding collagens and matrix metalloproteinase system increased the risk of aortic dissection.

Zongzhe Li1, Chengming Zhou1, Lun Tan1, Peng Chen1, Yanyan Cao1, Chenze Li1, Xianqing Li1, Jiangtao Yan1, Hesong Zeng1, Dao-Wu Wang2, Dao-Wen Wang3.   

Abstract

Aortic dissection (AD) is a devastating, heterogeneous condition of aorta. The homeostasis between collagens and matrix metalloproteases (MMPs)/tissue inhibitors of MMPs (TIMPs) system in the extracellular matrix plays an important role for structure and functions of aorta. However, our knowledge on association between variants of genes in this system and pathogenesis of AD is very limited. We analyzed all yet known coding human genes of collagens (45 genes), MMPs/TIMPs (27 genes) in 702 sporadic AD patients and in 163 matched healthy controls, by using massively targeted next-generation and Sanger sequencing. To define the pathogenesis of potential disease-causing candidate genes, we performed transcriptome sequencing and pedigree co-segregation analysis in some genes and generated Col5a2 knockout rats. We identified 257 pathogenic or likely pathogenic variants which involved 88.89% (64/72) genes in collagens-MMPs/TIMPs system and accounted for 31.05% (218/702) sporadic AD patients. In them, 84.86% patients (185/218) carried one variant, 12.84% two variants and 2.30% more than two variants. Importantly, we identified 52 novel probably pathogenic loss-of-function (LOF) variants (20 nonsense, 16 frameshift, 14 splice sites, one stop-loss, one initiation codon) in 11.06% (50/452) AD patients, which were absent in 163 controls (P=2.5×10-5). Transcriptome sequencing revealed that identified variants induced dyshomeostasis in expression of collagens-TIMPs/MMPs systems. The Col5a2 -/- rats manifested growth retardation and aortic dysplasia. Our study provides a first comprehensive map of genetic alterations in collagens-MMPs/TIMPs system in sporadic AD patients and suggests that variants of these genes contribute largely to AD pathogenesis.

Entities:  

Keywords:  aortic dissection; collagen; genetic diagnosis; matrix metalloproteinase; next-generation sequencing

Mesh:

Substances:

Year:  2016        PMID: 27975164     DOI: 10.1007/s11427-016-0333-3

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  7 in total

1.  Genetic variants in Chinese patients with sporadic Stanford type A aortic dissection.

Authors:  Zhao-Ran Chen; Ming-Hui Bao; Xing-Yu Wang; Yan-Min Yang; Bi Huang; Zhong-Li Han; Jun Cai; Xiao-Han Fan
Journal:  J Thorac Dis       Date:  2021-07       Impact factor: 2.895

2.  Targeted resequencing showing novel common and rare genetic variants increases the risk of asthma in the Chinese Han population.

Authors:  Juan Liu; Yanhan Deng; Bo Yu; Biwen Mo; Liman Luo; Jingping Yang; Xiaoju Zhang; Zheng Wang; Yingnan Wang; Jing Zhu; Hua Yang; Shirong Fang; Zhenshun Cheng; Jingping Li; Ying Shu; Guangwei Luo; Weining Xiong; Jianghong Wei; Zongzhe Li
Journal:  J Clin Lab Anal       Date:  2021-05-09       Impact factor: 2.352

3.  A nonsynonymous polymorphism (rs117179004, T392M) of hyaluronidase 1 (HYAL1) is associated with increased risk of idiopathic pulmonary fibrosis in Southern Han Chinese.

Authors:  Juan Liu; Yanhan Deng; Zheng Wang; Biwen Mo; Jianghong Wei; Zhenshun Cheng; Qingzhen Peng; Guang Wei; Jingping Li; Ying Shu; Hua Yang; Shirong Fang; Guangwei Luo; Shuo Yang; Yingnan Wang; Jing Zhu; Jingping Yang; Ming Wu; Xuyan Xu; Renying Ge; Xiaoju Zhang; Weining Xiong; Xiaomei Wang; Zongzhe Li
Journal:  J Clin Lab Anal       Date:  2021-05-04       Impact factor: 2.352

4.  The coexistence of a novel WNK1 variant and a copy number variation causes hereditary sensory and autonomic neuropathy type IIA.

Authors:  James Jiqi Wang; Bo Yu; Zongzhe Li
Journal:  BMC Med Genet       Date:  2019-05-27       Impact factor: 2.103

5.  Rare Variants and Polymorphisms of FBN1 Gene May Increase the Risk of Non-Syndromic Aortic Dissection.

Authors:  Meichen Pan; Lianjie Li; Zehao Li; Shu Chen; Zongzhe Li; Yuning Wang; Henghui He; Lihua Lin; Haihao Wang; Qian Liu
Journal:  Front Genet       Date:  2022-01-27       Impact factor: 4.599

6.  Postmortem detection of COL gene family variants in two aortic dissection cases.

Authors:  Meichen Pan; Yuning Wang; Lianjie Li; Zehao Li; Shifan Wu; Qian Liu
Journal:  Int J Legal Med       Date:  2021-06-14       Impact factor: 2.686

7.  Verification of hub genes in the expression profile of aortic dissection.

Authors:  Weitie Wang; Qing Liu; Yong Wang; Hulin Piao; Bo Li; Zhicheng Zhu; Dan Li; Tiance Wang; Rihao Xu; Kexiang Liu
Journal:  PLoS One       Date:  2019-11-21       Impact factor: 3.240

  7 in total

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