| Literature DB >> 34422331 |
Zhao-Ran Chen1,2, Ming-Hui Bao1,3, Xing-Yu Wang4,5, Yan-Min Yang1, Bi Huang1,6, Zhong-Li Han1, Jun Cai1, Xiao-Han Fan1.
Abstract
BACKGROUND: Genetic disorders are strongly associated with aortic disease. However, the identities of genetic mutations in sporadic Stanford type A aortic dissection (STAAD) are not clear. The present study analysed the possible genetic mutations of the known pathogenic genes of aortic disease and the clinical characteristics in patients with sporadic STAAD.Entities:
Keywords: Aortic dissection (AD); Stanford type A; clinical features; gene mutation; mortality
Year: 2021 PMID: 34422331 PMCID: PMC8339749 DOI: 10.21037/jtd-20-2758
Source DB: PubMed Journal: J Thorac Dis ISSN: 2072-1439 Impact factor: 2.895
Panel of the 26 tested genes
| No. | Type | Gene | OMIM No. | Clinical manifestation |
|---|---|---|---|---|
| 1 | ECM proteins |
| 154700 | Marfan’s syndrome |
| 2 | ECM proteins |
| 612570 | Beals syndrome; Contractural arachnodactyly |
| 3 | ECM proteins |
| 616166 | Aortic aneurysm, familial thoracic 9 |
| 4 | ECM proteins |
| 130000 | Ehlers-Danlos syndrome, classic type |
| 5 | ECM proteins |
| 130060 | Ehlers-Danlos syndrome, procollagen proteinase deficient |
| 6 | ECM proteins |
| 130050 | Ehlers-Danlos syndrome, vascular type |
| 7 | ECM proteins |
| 130000 | Ehlers-Danlos syndrome, classic type |
| 8 | ECM proteins |
| 130000 | Ehlers-Danlos syndrome, classic type |
| 9 | ECM proteins |
| 225041 | Ehlers-Danlos syndrome type 7 |
| 10 | ECM proteins |
| 277600 | Weill-Marchesani syndrome 1 |
| 11 | ECM proteins |
| 225400 | Ehlers-Danlos syndrome, hydroxylysine-deficient |
| 12 | ECM proteins |
| 612394 | Bone fragility with contractures, arterial rupture, and deafness |
| 13 | ECM proteins |
| 123700 | Williams syndrome, Supravalvar aortic stenosis |
| 14 | ECM proteins |
| 614437 | Cutis laxa autosomal recessive IIA |
| 15 | TGF-β pathway |
| 609192 | Loeys-Dietz syndrome 1 |
| 16 | TGF-β pathway |
| 190182 | Loeys-Dietz syndrome 2 |
| 17 | TGF-β pathway |
| 613795 | Loeys-Dietz syndrome 3 |
| 18 | TGF-β pathway |
| 190220 | Loeys-Dietz syndrome 4 |
| 19 | TGF-β pathway |
| 615582 | Loeys-Dietz syndrome 5 |
| 20 | Cytoskeletal/smooth muscle contraction apparatus proteins |
| 132900 | Aortic aneurysm, familial thoracic 4 |
| 21 | Cytoskeletal/smooth muscle contraction apparatus proteins |
| 611788 | Aortic aneurysm, familial thoracic 6 |
| 22 | Cytoskeletal/smooth muscle contraction apparatus proteins |
| 613780 | Aortic aneurysm, familial thoracic 7 |
| 23 | Cytoskeletal/smooth muscle contraction apparatus proteins |
| 615436 | Aortic aneurysm, familial thoracic 8 |
| 24 | Cytoskeletal/smooth muscle contraction apparatus proteins |
| 300375 | Heterotopia, periventricular, Ehlers-Danlos variant |
| 25 | Neural crest migration |
| 109730 | Familial thoracic aortic aneurysm with bicuspid aortic valve |
| 26 | Facilitative glucose transporter |
| 208050 | Arterial tortuosity syndrome |
ECM, extracellular matrix; TGF, transforming growth factor.
Clinical characteristics of tested patients with Stanford type A AAD
| Clinical characteristics | Total (n=100) |
|---|---|
| Age at onset, years | 52.7±12.3 |
| Male, n (%) | 62 (62.0) |
| Family history, n (%) | 0 (0.0) |
| Phenotype | |
| DeBakey type I, n (%) | 84 (84.0) |
| Comorbidities and risk factors | |
| Hypertension, n (%) | 65 (65.0) |
| Diabetes mellitus, n (%) | 4 (4.0) |
| Coronary artery disease, n (%) | 4 (4.0) |
| Smoke, n (%) | 34 (34.0) |
| Alcohol history, n (%) | 13 (13.0) |
| Clinical features | |
| BMI, kg/m2 | 25.2±3.7 |
| Ascending aorta diameter, mm | 46.4±12.1 |
| Facial features | 0 (0.0) |
| Skeletal abnormalities | 0 (0.0) |
BMI, body mass index.
Figure 1Summary of the genetic variants of the panel genes based on the results of whole-genome sequencing. STAAD, Stanford type A aortic dissection; SNV, single-nucleotide variants.
Detailed list of identified variants in patients with mutations of panel genes
| No. | Affected genes | Chromosome location (HG 19) | Transcription | Exon | Variant (DNA level) | Variant (protein level) | Variant type | Variant previously reported | Sift† | Polyphen‡ | Patient ID | Age, sex |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | FBN1 | Chr15:48703206 | NM_000138 | exon66 | c.T8597A | p.I2866N | Missense | Novel | D | P | A486 | 59, F |
| FBN1 | Chr15:48717611 | NM_000138 | exon60 | c.T7408G | p.C2470G | Missense | Novel | D | D | A403 | 43, F | |
| FBN1 | Chr15:48720626 | NM_000138 | exon57 | c.G6914C | p.G2305A | Missense | Novel | T | D | A65 | 55, M | |
| FBN1 | Chr15:48737635 | NM_000138 | exon48 | c.G5855A | p.G1952E | Missense | Novel | D | D | A483 | 51, M | |
| FBN1 | Chr15:48766500 | NM_000138 | exon34 | c.C4162T | p.R1388C | Missense | Novel | D | P | A73 | 45, M | |
| FBN1 | Chr15:48787358 | NM_000138 | exon22 | c.G2639A | p.G880D | Missense | Novel | D | D | A342 | 48, M | |
| FBN1 | Chr15:48787384 | NM_000138 | exon22 | c.A2613C | p.L871F | Missense | Novel | D | D | A291 | 20, F | |
| FBN1 | Chr15:48812996 | NM_000138 | exon10 | c.G1007C | p.C336S | Missense | Novel | T | D | A458 | 42, M | |
| FBN1 | Chr15:48738912 | NM_000138 | exon47 | c.5778delT | p.N1926fs | Frameshift deletion | Novel | D | D | A203 | 49, M | |
| FBN1 | Chr15:48802262 | NM_000138 | exon14 | c.C1693T | p.R565X | Nonesense | Known | D | D | A434 | 35, M | |
| 2 | MYH11 | Chr16:15814118 | NM_002474 | exon34 | c.G4843A | p.A1615T | Missense | Novel | D | P | A437 | 60, M |
| MYH11 | Chr16:15820797 | NM_002474 | exon28 | c.A3766C | p.K1256Q | Missense | Novel | D | D | A445; A485 | 51,F; 81,F | |
| MYH11 | Chr16:15814752 | NM_002474 | exon33 | c.G4735A | p.D1579N | Missense | Novel | D | D | A295 | 76, M | |
| MYH11 | Chr16:15814883 | NM_002474 | exon33 | c.G4604A | p.R1535Q | Missense | Novel | D | D | A486; A263 | 59, F; 46, M | |
| MYH11 | Chr16:15815415 | NM_002474 | exon32 | c.A4442T | p.K1481M | Missense | Novel | T | D | A313 | 72, F | |
| MYH11 | Chr16:15931842 | NM_001040113 | exon2 | c.A268G | p.M90V | Missense | Novel | D | D | A483 | 51, M | |
| MYH11 | Chr16:15820794 | NM_002474 | exon28 | c.3757_3759del | p.1253_1253del | Nonframeshift deletion | Novel | D | D | A315 | 67, M | |
| 3 | MYLK | Chr3:123356997 | NM_053026 | exon28 | c.G4675A | p.V1559M | Missense | Novel | D | D | A242 | 55, M |
| MYLK | Chr3:123419455 | NM_053026 | exon17 | c.C2653T | p.R885C | Missense | Novel | T | D | A137 | 70, M | |
| MYLK | Chr3:123427731 | NM_053026 | exon14 | c.C1747G | p.P583A | Missense | Novel | T | D | A199 | 30, F | |
| MYLK | Chr3:123427662 | NM_053026 | exon14 | c.G1816A | p.G606R | Missense | Novel | D | D | A197; A260 | 38, M; 77, F | |
| MYLK | Chr3:123337586 | NM_053031 | exon2 | c.113_114insTG | p.A38fs | Frameshift insertion | Novel | D | D | A480 | 52, F | |
| MYLK | Chr3:123452658 | NM_053025 | exon10 | c.1179_1181del | p.393_394del | Nonframeshift deletion | Novel | D | D | A209 | 49, F | |
| 4 | COL5A1 | Chr9:137582848 | NM_000093 | exon2 | c.C200T | p.S67F | Missense | Novel | D | P | A459 | 44, M |
| COL5A1 | Chr9:137591878 | NM_000093 | exon3 | c.G401A | p.R134H | Missense | Novel | D | D | A185 | 46, F | |
| COL5A1 | Chr9:137623972 | NM_000093 | exon9 | c.C1388T | p.P463L | Missense | Novel | D | D | A436 | 66, M | |
| COL5A1 | Chr9:137698140 | NM_000093 | exon42 | c.C3364A | p.P1122T | Missense | Novel | D | B | A458 | 42, M | |
| COL5A1 | Chr9:137701090 | NM_000093 | exon43 | c.C3428T | p.P1143L | Missense | Novel | T | D | A309 | 38, M | |
| COL5A1 | Chr9:137727015 | NM_000093 | exon65 | c.A5335G | p.N1779D | Missense | Novel | D | B | A282 | 54, F | |
| 5 | ELN | Chr7:73474880 | NM_001278939 | exon26 | c.G1883C | p.G628A | Missense | Novel | D | – | A199 | 30, F |
| ELN | Chr7:73470666 | NM_001278913 | exon17 | c.G1108A | p.G370S | Missense | Novel | T | D | A295 | 76, M | |
| ELN | Chr7:73466278 | NM_001278913 | exon14 | c.C806T | p.A269V | Missense | Novel | D | D | A95 | 43, M | |
| ELN | Chr7:73461035 | NM_001278918 | exon9 | c.C449T | p.P150L | Missense | Novel | T | D | A201 | 75, F | |
| ELN | Chr7:73449715 | NM_000501 | exon2 | c.G104C | p.G35A | Missense | Novel | T | D | A239 | 66, F | |
| 6 | ACTA2 | Chr10:90701550 | NM_001141945 | exon5 | c.G446A | p.R149H | Missense | Known | D | D | A130; A406 | 42, M; 64, F |
| ACTA2 | Chr10:90699437 | NM_001141945 | exon7 | c.G635A | p.R212Q | Missense | Known | D | D | A199; A476 | 30, F; 43, F | |
| ACTA2 | Chr10:90707140 | NM_001141945 | exon3 | c.G133T | p.V45L | Missense | Novel | D | D | A451 | 76, F | |
| 7 | COL1A2 | Chr7:94055131 | NM_000089 | exon44 | c.G2905A | p.V969M | Missense | Novel | D | B | A349 | 57, M |
| COL1A2 | Chr7:94052321 | NM_000089 | exon40 | c.G2456A | p.R819H | Missense | Novel | D | D | A199; A291 | 30, F 20, F | |
| 8 | FBN2 | Chr5:127714544 | NM_001999 | exon12 | c.A1643C | p.D548A | Missense | Novel | T | D | A282 | 54, F |
| FBN2 | Chr5:127800434 | NM_001999 | exon6 | c.G809T | p.R270L | Missense | Novel | D | D | A246 | 60, M | |
| FBN2 | Chr5:127670946 | NM_001999 | exon30 | c.G3889A | p.G1297S | Missense | Novel | D | D | A457 | 43, M | |
| 9 | PLOD3 | Chr7:100854915 | NM_001084 | exon12 | c.G1315A | p.A439T | Missense | Novel | D | P | A320 | 40, M |
| PLOD3 | Chr7:100850890 | NM_001084 | exon17 | c.C1904T | p.T635I | Missense | Novel | T | D | A58 | 68, F | |
| PLOD3 | Chr7:100858379 | NM_001084 | exon6 | c.G670A | p.G224R | Missense | Novel | D | D | A180 | 63, F | |
| 10 | COL1A1 | Chr17:48267260 | NM_000088 | exon37 | c.C2573G | p.A858G | Missense | Novel | D | B | A349 | 57, M |
| COL1A1 | Chr17:48269364 | NM_000088 | exon30 | c.G2005A | p.A669T | Missense | Novel | T | D | A65 | 55. M | |
| 11 | COL3A1 | Chr2:189870953 | NM_000090 | exon42 | c.C3061A | p.L1021I | Missense | Novel | T | D | A180 | 63, F |
| COL3A1 | Chr2:189859447 | NM_000090 | exon20 | c.1348-3C>T | – | Splicing site | Novel | – | – | A480 | 52, F | |
| 12 | EFEMP2 | Chr11:65635400 | NM_016938 | exon10 | c.G1102A | p.V368I | Missense | Novel | T | D | A131 | 58, F |
| EFEMP2 | Chr11:65638012 | NM_016938 | exon5 | c.G485A | p.C162Y | Missense | Novel | D | D | A342 | 48, M | |
| 13 | TGFBR1 | Chr9:101904938 | NM_001130916 | exon4 | c.C695T | p.T232M | Missense | Novel | D | D | A217 | 38, M |
| TGFBR1 | Chr9:101911496 | NM_001130916 | exon8 | c.G1190A | p.C397Y | Missense | Novel | D | D | A64 | 55, F | |
| 14 | TGFBR2 | Chr3:30732951 | NM_003242 | exon7 | c.G1564A | p.D522N | Missense | Known | D | D | A290 | 31, F |
| TGFBR2 | Chr3:30713543 | NM_003243 | exon4 | c.871_873del | p.291_291del | Nonframeshift deletion | Novel | D | D | A291 | 20, F | |
| 15 | COL5A2 | Chr2:189918632 | NM_000393 | exon37 | c.C2488T | p.R830W | Missense | Novel | – | D | A163 | 49, M |
| 16 | FLNA | ChrX:153590106 | NM_001110556 | exon20 | c.G2876A | p.S959N | Missense | Novel | D | D | A448 | 53, F |
| 17 | NOTCH1 | Chr9:139393702 | NM_017617 | exon32 | c.C5944T | p.R1982W | Missense | Novel | D | D | A457 | 43, M |
| 18 | PLOD1 | Chr1:12017040 | NM_000302 | exon7 | c.C710T | p.P237L | Missense | Novel | D | D | A349 | 57, M |
| 19 | TGFB3 | Chr14:76427339 | NM_003239 | exon6 | c.C1007T | p.P336L | Missense | Novel | D | D | A246 | 60, M |
†, SIFT prediction: D, not tolerated; T, tolerated; ‡, PolyPhen prediction: D, probably damaging; P, possibly damaging; B, benign. –, not applicable.
Figure 2Gene mutations identified by whole-genome sequencing in 100 subjects with sporadic Stanford type A aortic dissection. Fourteen percent of patients (14/100) carried more than one mutation.
Baseline characteristics of sporadic subjects diagnosed with Stanford type A AAD related to the presence, number and type of pathogenic mutations
| Clinical characteristics | Total (n=100) | Mutations of the panel genes | Number of mutations of the panel genes | Type of mutations | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| With (n=50) | Without (n=50) | P value | Single (n=36) | Multiple (n=14) | P value | ECM coding (n=29) | Other (n=21) | P value | ||||
| Age at onset, years | 52.7±12.3 | 52.7±13.8 | 52.6±10.7 | 0.948 | 53.5±13.8 | 50.7±13.9 | 0.522 | 50.7±12.5 | 55.5±15.3 | 0.228 | ||
| Male, n (%) | 62 (62.0) | 29 (58.0) | 33 (66.0) | 0.410 | 20 (55.6) | 9 (64.3) | 0.547 | 20 (69.0) | 9 (42.9) | 0.086 | ||
| Height, cm | 169.1±7.7 | 168.5±7.8 | 169.7±7.6 | 0.455 | 167.9±7.9 | 170.1±7.8 | 0.382 | 170.1±7 | 166.2±8.6 | 0.083 | ||
| Weight, kg | 71.9±12.3 | 71.5±12.5 | 72.3±12.2 | 0.737 | 71.8±11.8 | 70.9±14.4 | 0.836 | 74±13.1 | 68.1±10.8 | 0.102 | ||
| BMI, kg/m2 | 25.2±3.7 | 25.1±3.8 | 25.1±3.5 | 0.915 | 25.4±3.6 | 24.4±4.5 | 0.426 | 25.5±4 | 24.7±3.7 | 0.449 | ||
| DeBakey type I, n (%) | 84 (84.0) | 42 (84.0) | 42 (84.0) | 1.000 | 10 (88.9) | 10 (71.4) | 0.197 | 28 (96.6) | 14 (66.7) | 0.007 | ||
| Hypertension, n (%) | 65 (65.0) | 33 (66.0) | 32 (64.0) | 0.834 | 24 (66.7) | 9 (64.3) | 1.000 | 18 (62.1) | 15 (71.4) | 0.490 | ||
| Diabetes mellitus, n (%) | 4 (4.0) | 0 (0.0) | 4 (8.0) | 0.126 | 0 (0.0) | 0 (0.0) | 1.000 | 0 (0.0) | 0 (0.0) | 1.000 | ||
| Coronary artery disease, n (%) | 4 (4.0) | 2 (4.0) | 2 (4.0) | 1.000 | 0 (0.0) | 2 (14.3) | 0.131 | 2 (6.9) | 0 (0.0) | 0.503 | ||
| Smoke, n (%) | 34 (34.0) | 17 (34.0) | 17 (34.0) | 1.000 | 12 (33.3) | 5 (35.7) | 1.000 | 14 (48.3) | 6 (28.6) | 0.160 | ||
| Alcohol history, n (%) | 13 (13.0) | 6 (12.0) | 7 (14.0) | 1.000 | 4 (11.1) | 2 (14.3) | 1.000 | 4 (13.8) | 4 (19.0) | 0.706 | ||
| SBP, mmHg | 119.7±18.9 | 119.6±18.2 | 119.8±19.8 | 0.962 | 118±18.9 | 123.6±16.6 | 0.310 | 118.9±20.4 | 120.6±15.2 | 0.741 | ||
| DBP, mmHg | 62.9±12.2 | 63.2±13.2 | 62.6±11.2 | 0.794 | 61.4±13.3 | 67.9±12.1 | 0.110 | 62.2±12.3 | 64.6±14.5 | 0.537 | ||
| Heart rate, bpm | 84.8±11.9 | 84.1±12.2 | 85.6±11.6 | 0.525 | 83.3±13.2 | 86.1±9.2 | 0.458 | 86.1±14 | 81.3±8.7 | 0.175 | ||
| Ascending aorta diameter, mm | 46.4±12.1 | 49.1±12.3 | 43.7±11.2 | 0.023 | 49.9±12.7 | 47.1±11.5 | 0.465 | 49.3±11.9 | 48.9±13.2 | 0.904 | ||
| Surgical intervention, n (%) | 63 (63.0) | 32 (64.0) | 31 (62.0) | 0.836 | 22 (61.6) | 10 (71.4) | 0.495 | 21 (72.4) | 11 (52.4) | 0.145 | ||
ECM, extracellular matrix; BMI, body mass index; SBP, systolic blood pressure; DBP, diastolic blood pressure.
Figure 3In-hospital outcome in subjects with Stanford type A aortic dissection. (A) Comparison of in-hospital mortality according to the presence, number and type of mutations. Subgrouped comparisons of all-cause mortality stratified by the presence (B), number (C) and type (D) of mutations in patients who received conservative treatment or surgical intervention.