Literature DB >> 27940242

Co-translational protein folding: progress and methods.

Michael Thommen1, Wolf Holtkamp1, Marina V Rodnina2.   

Abstract

Proteins are synthesized as linear polymers and have to fold into their native structure to fulfil various functions in the cell. Folding can start co-translationally when the emerging peptide is still attached to the ribosome and is guided by the environment of the polypeptide exit tunnel and the kinetics of translation. Major questions are: When does co-translational folding begin? What is the role of the ribosome in guiding the nascent peptide towards its native structure? How does translation elongation kinetics modulate protein folding? Here we suggest how novel structural and biophysical approaches can help to probe the interplay between the ribosome and the emerging peptide and present future challenges in understanding co-translational folding.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27940242     DOI: 10.1016/j.sbi.2016.11.020

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  44 in total

1.  Differences in the path to exit the ribosome across the three domains of life.

Authors:  Khanh Dao Duc; Sanjit S Batra; Nicholas Bhattacharya; Jamie H D Cate; Yun S Song
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

Review 2.  The stop-and-go traffic regulating protein biogenesis: How translation kinetics controls proteostasis.

Authors:  Kevin C Stein; Judith Frydman
Journal:  J Biol Chem       Date:  2018-11-30       Impact factor: 5.157

3.  Charge Interactions Can Dominate Coupled Folding and Binding on the Ribosome.

Authors:  Jacopo Marino; Karin J Buholzer; Franziska Zosel; Daniel Nettels; Benjamin Schuler
Journal:  Biophys J       Date:  2018-08-15       Impact factor: 4.033

Review 4.  Adaptation of mRNA structure to control protein folding.

Authors:  Guilhem Faure; Aleksey Y Ogurtsov; Svetlana A Shabalina; Eugene V Koonin
Journal:  RNA Biol       Date:  2017-08-29       Impact factor: 4.652

5.  The Ribosome Cooperates with a Chaperone to Guide Multi-domain Protein Folding.

Authors:  Kaixian Liu; Kevin Maciuba; Christian M Kaiser
Journal:  Mol Cell       Date:  2019-03-06       Impact factor: 17.970

Review 6.  Unraveling co-translational protein folding: Concepts and methods.

Authors:  Anton A Komar
Journal:  Methods       Date:  2017-12-06       Impact factor: 3.608

Review 7.  Folding up and Moving on-Nascent Protein Folding on the Ribosome.

Authors:  Christian M Kaiser; Kaixian Liu
Journal:  J Mol Biol       Date:  2018-07-05       Impact factor: 5.469

8.  Correcting the F508del-CFTR variant by modulating eukaryotic translation initiation factor 3-mediated translation initiation.

Authors:  Darren M Hutt; Salvatore Loguercio; Daniela Martino Roth; Andrew I Su; William E Balch
Journal:  J Biol Chem       Date:  2018-07-13       Impact factor: 5.157

Review 9.  Single-Molecule Fluorescence Applied to Translation.

Authors:  Arjun Prabhakar; Elisabetta Viani Puglisi; Joseph D Puglisi
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-01-02       Impact factor: 10.005

10.  Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis.

Authors:  Nadin Haase; Wolf Holtkamp; Reinhard Lipowsky; Marina Rodnina; Sophia Rudorf
Journal:  Nucleic Acids Res       Date:  2018-12-14       Impact factor: 16.971

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