Literature DB >> 27933931

Imaging and Quantitation of a Succession of Transient Intermediates Reveal the Reversible Self-Assembly Pathway of a Simple Icosahedral Virus Capsid.

María Medrano1, Miguel Ángel Fuertes1, Alejandro Valbuena1, Pablo J P Carrillo1, Alicia Rodríguez-Huete1, Mauricio G Mateu1.   

Abstract

Understanding the fundamental principles underlying supramolecular self-assembly may facilitate many developments, from novel antivirals to self-organized nanodevices. Icosahedral virus particles constitute paradigms to study self-assembly using a combination of theory and experiment. Unfortunately, assembly pathways of the structurally simplest virus capsids, those more accessible to detailed theoretical studies, have been difficult to study experimentally. We have enabled the in vitro self-assembly under close to physiological conditions of one of the simplest virus particles known, the minute virus of mice (MVM) capsid, and experimentally analyzed its pathways of assembly and disassembly. A combination of electron microscopy and high-resolution atomic force microscopy was used to structurally characterize and quantify a succession of transient assembly and disassembly intermediates. The results provided an experiment-based model for the reversible self-assembly pathway of a most simple (T = 1) icosahedral protein shell. During assembly, trimeric capsid building blocks are sequentially added to the growing capsid, with pentamers of building blocks and incomplete capsids missing one building block as conspicuous intermediates. This study provided experimental verification of many features of self-assembly of a simple T = 1 capsid predicted by molecular dynamics simulations. It also demonstrated atomic force microscopy imaging and automated analysis, in combination with electron microscopy, as a powerful single-particle approach to characterize at high resolution and quantify transient intermediates during supramolecular self-assembly/disassembly reactions. Finally, the efficient in vitro self-assembly achieved for the oncotropic, cell nucleus-targeted MVM capsid may facilitate its development as a drug-encapsidating nanoparticle for anticancer targeted drug delivery.

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Year:  2016        PMID: 27933931     DOI: 10.1021/jacs.6b07663

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Molecular dynamics study of T = 3 capsid assembly.

Authors:  D C Rapaport
Journal:  J Biol Phys       Date:  2018-04-02       Impact factor: 1.365

Review 2.  Physical, chemical, and synthetic virology: Reprogramming viruses as controllable nanodevices.

Authors:  Maria Yanqing Chen; Susan S Butler; Weitong Chen; Junghae Suh
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2018-11-08

3.  Fluorescence Correlation Spectroscopy Analysis of Effect of Molecular Crowding on Self-Assembly of β-Annulus Peptide into Artificial Viral Capsid.

Authors:  Risako Kobayashi; Hiroshi Inaba; Kazunori Matsuura
Journal:  Int J Mol Sci       Date:  2021-04-30       Impact factor: 5.923

4.  Packaging contests between viral RNA molecules and kinetic selectivity.

Authors:  Inbal Mizrahi; Robijn Bruinsma; Joseph Rudnick
Journal:  PLoS Comput Biol       Date:  2022-04-01       Impact factor: 4.779

5.  Visualization of Single Molecules Building a Viral Capsid Protein Lattice through Stochastic Pathways.

Authors:  Alejandro Valbuena; Sourav Maity; Mauricio G Mateu; Wouter H Roos
Journal:  ACS Nano       Date:  2020-07-07       Impact factor: 15.881

6.  Real-Time Assembly of Viruslike Nucleocapsids Elucidated at the Single-Particle Level.

Authors:  Margherita Marchetti; Douwe Kamsma; Ernesto Cazares Vargas; Armando Hernandez García; Paul van der Schoot; Renko de Vries; Gijs J L Wuite; Wouter H Roos
Journal:  Nano Lett       Date:  2019-08-01       Impact factor: 11.189

7.  Mapping the energy landscapes of supramolecular assembly by thermal hysteresis.

Authors:  Robert W Harkness V; Nicole Avakyan; Hanadi F Sleiman; Anthony K Mittermaier
Journal:  Nat Commun       Date:  2018-08-08       Impact factor: 14.919

Review 8.  Physical virology: From virus self-assembly to particle mechanics.

Authors:  Pedro Buzón; Sourav Maity; Wouter H Roos
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2020-01-20

9.  Nonequilibrium self-assembly dynamics of icosahedral viral capsids packaging genome or polyelectrolyte.

Authors:  Maelenn Chevreuil; Didier Law-Hine; Jingzhi Chen; Stéphane Bressanelli; Sophie Combet; Doru Constantin; Jéril Degrouard; Johannes Möller; Mehdi Zeghal; Guillaume Tresset
Journal:  Nat Commun       Date:  2018-08-06       Impact factor: 14.919

10.  Residue-Specific Solvation-Directed Thermodynamic and Kinetic Control over Peptide Self-Assembly with 1D/2D Structure Selection.

Authors:  Yiyang Lin; Matthew Penna; Michael R Thomas; Jonathan P Wojciechowski; Vincent Leonardo; Ye Wang; E Thomas Pashuck; Irene Yarovsky; Molly M Stevens
Journal:  ACS Nano       Date:  2019-01-23       Impact factor: 15.881

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