Literature DB >> 30411529

Physical, chemical, and synthetic virology: Reprogramming viruses as controllable nanodevices.

Maria Yanqing Chen1, Susan S Butler1, Weitong Chen2, Junghae Suh1,3.   

Abstract

The fields of physical, chemical, and synthetic virology work in partnership to reprogram viruses as controllable nanodevices. Physical virology provides the fundamental biophysical understanding of how virus capsids assemble, disassemble, display metastability, and assume various configurations. Chemical virology considers the virus capsid as a chemically addressable structure, providing chemical pathways to modify the capsid exterior, interior, and subunit interfaces. Synthetic virology takes an engineering approach, modifying the virus capsid through rational, combinatorial, and bioinformatics-driven design strategies. Advances in these three subfields of virology aim to develop virus-based materials and tools that can be applied to solve critical problems in biomedicine and biotechnology, including applications in gene therapy and drug delivery, diagnostics, and immunotherapy. Examples discussed include mammalian viruses, such as adeno-associated virus (AAV), plant viruses, such as cowpea mosaic virus (CPMV), and bacterial viruses, such as Qβ bacteriophage. Importantly, research efforts in physical, chemical, and synthetic virology have further unraveled the design principles foundational to the form and function of viruses. This article is categorized under: Diagnostic Tools > Diagnostic Nanodevices Biology-Inspired Nanomaterials > Protein and Virus-Based Structures.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  adeno-associated virus; chemical virology; gene therapy; physical virology; synthetic virology

Year:  2018        PMID: 30411529      PMCID: PMC6461522          DOI: 10.1002/wnan.1545

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol        ISSN: 1939-0041


  171 in total

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2.  A theoretical model successfully identifies features of hepatitis B virus capsid assembly.

Authors:  A Zlotnick; J M Johnson; P W Wingfield; S J Stahl; D Endres
Journal:  Biochemistry       Date:  1999-11-02       Impact factor: 3.162

3.  Directed evolution of thymidine kinase for AZT phosphorylation using DNA family shuffling.

Authors:  F C Christians; L Scapozza; A Crameri; G Folkers; W P Stemmer
Journal:  Nat Biotechnol       Date:  1999-03       Impact factor: 54.908

4.  Polymer-coated adenovirus permits efficient retargeting and evades neutralising antibodies.

Authors:  K D Fisher; Y Stallwood; N K Green; K Ulbrich; V Mautner; L W Seymour
Journal:  Gene Ther       Date:  2001-03       Impact factor: 5.250

5.  Selective transduction of protease-rich tumors by matrix-metalloproteinase-targeted retroviral vectors.

Authors:  K W Peng; R Vile; F L Cosset; S Russell
Journal:  Gene Ther       Date:  1999-09       Impact factor: 5.250

6.  PEGylation of adenovirus with retention of infectivity and protection from neutralizing antibody in vitro and in vivo.

Authors:  C R O'Riordan; A Lachapelle; C Delgado; V Parkes; S C Wadsworth; A E Smith; G E Francis
Journal:  Hum Gene Ther       Date:  1999-05-20       Impact factor: 5.695

7.  Redirected infection of directly biotinylated recombinant adenovirus vectors through cell surface receptors and antigens.

Authors:  J S Smith; J R Keller; N C Lohrey; C S McCauslin; M Ortiz; K Cowan; S E Spence
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

8.  Separation and crystallization of T = 3 and T = 4 icosahedral complexes of the hepatitis B virus core protein.

Authors:  A Zlotnick; I Palmer; J D Kaufman; S J Stahl; A C Steven; P T Wingfield
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-03

9.  Mechanism of capsid assembly for an icosahedral plant virus.

Authors:  A Zlotnick; R Aldrich; J M Johnson; P Ceres; M J Young
Journal:  Virology       Date:  2000-11-25       Impact factor: 3.616

10.  Crystal structure of tobacco necrosis virus at 2.25 A resolution.

Authors:  Y Oda; K Saeki; Y Takahashi; T Maeda; H Naitow; T Tsukihara; K Fukuyama
Journal:  J Mol Biol       Date:  2000-06-30       Impact factor: 5.469

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  4 in total

1.  Site-Specific Post-translational Surface Modification of Adeno-Associated Virus Vectors Using Leucine Zippers.

Authors:  Nicole N Thadani; Joanna Yang; Buhle Moyo; Ciaran M Lee; Maria Y Chen; Gang Bao; Junghae Suh
Journal:  ACS Synth Biol       Date:  2020-02-18       Impact factor: 5.110

2.  Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.

Authors:  Fengbin Wang; Diana P Baquero; Leticia C Beltran; Zhangli Su; Tomasz Osinski; Weili Zheng; David Prangishvili; Mart Krupovic; Edward H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-05       Impact factor: 11.205

3.  Frustration and Direct-Coupling Analyses to Predict Formation and Function of Adeno-Associated Virus.

Authors:  Nicole N Thadani; Qin Zhou; Kiara Reyes Gamas; Susan Butler; Carlos Bueno; Nicholas P Schafer; Faruck Morcos; Peter G Wolynes; Junghae Suh
Journal:  Biophys J       Date:  2020-12-25       Impact factor: 4.033

Review 4.  Field-Effect Sensors for Virus Detection: From Ebola to SARS-CoV-2 and Plant Viral Enhancers.

Authors:  Arshak Poghossian; Melanie Jablonski; Denise Molinnus; Christina Wege; Michael J Schöning
Journal:  Front Plant Sci       Date:  2020-11-24       Impact factor: 5.753

  4 in total

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