Literature DB >> 27930288

Experimental evolution reveals hyperparasitic interactions among transposable elements.

Émilie Robillard1, Arnaud Le Rouzic1, Zheng Zhang1, Pierre Capy1, Aurélie Hua-Van2.   

Abstract

Transposable elements (TEs) are repeated DNA sequences that can constitute a substantial part of genomes. Studying TEs' activity, interactions, and accumulation dynamics is thus of major interest to understand genome evolution. Here, we describe the transposition dynamics of cut-and-paste mariner elements during experimental (short- and longer-term) evolution in Drosophila melanogaster Flies with autonomous and nonautonomous mariner copies were introduced in populations containing no active mariner, and TE accumulation was tracked by quantitative PCR for up to 100 generations. Our results demonstrate that (i) active mariner elements are highly invasive and characterized by an elevated transposition rate, confirming their capacity to spread in populations, as predicted by the "selfish-DNA" mechanism; (ii) nonautonomous copies act as parasites of autonomous mariner elements by hijacking the transposition machinery produced by active mariner, which can be considered as a case of hyperparasitism; (iii) this behavior resulted in a failure of active copies to amplify which systematically drove the whole family to extinction in less than 100 generations. This study nicely illustrates how the presence of transposition-competitive variants can deeply impair TE dynamics and gives clues to the extraordinary diversity of TE evolutionary histories observed in genomes.

Entities:  

Keywords:  Drosophila; experimental evolution; hyperparasitism; invasion dynamics; transposable elements

Mesh:

Substances:

Year:  2016        PMID: 27930288      PMCID: PMC5187678          DOI: 10.1073/pnas.1524143113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  Genetic algorithm-based model of evolutionary dynamics of class II transposable elements.

Authors:  H Quesneville; D Anxolabéhère
Journal:  J Theor Biol       Date:  2001-11-07       Impact factor: 2.691

Review 2.  Intracellular battlegrounds: conflict and cooperation between transposable elements.

Authors:  Teresa E Leonardo; Sergey V Nuzhdin
Journal:  Genet Res       Date:  2002-12       Impact factor: 1.588

3.  Dynamics of the hobo transposable element in transgenic lines of Drosophila melanogaster.

Authors:  V Ladeveze; S Aulard; N Chaminade; C Biemont; G Periquet; F Lemeunier
Journal:  Genet Res       Date:  2001-04       Impact factor: 1.588

4.  The first steps of transposable elements invasion: parasitic strategy vs. genetic drift.

Authors:  Arnaud Le Rouzic; Pierre Capy
Journal:  Genetics       Date:  2005-02       Impact factor: 4.562

Review 5.  Transposase concentration controls transposition activity: myth or reality?

Authors:  Solenne Bire; Sophie Casteret; Ahmed Arnaoty; Benoît Piégu; Thierry Lecomte; Yves Bigot
Journal:  Gene       Date:  2013-08-28       Impact factor: 3.688

6.  Selfish genetic elements favor the evolution of a distinction between soma and germline.

Authors:  Louise J Johnson
Journal:  Evolution       Date:  2008-05-27       Impact factor: 3.694

Review 7.  Co-evolution between transposable elements and their hosts: a major factor in genome size evolution?

Authors:  J Arvid Ågren; Stephen I Wright
Journal:  Chromosome Res       Date:  2011-08       Impact factor: 5.239

8.  Autoregulation of mariner transposase activity by overproduction and dominant-negative complementation.

Authors:  A R Lohe; D L Hartl
Journal:  Mol Biol Evol       Date:  1996-04       Impact factor: 16.240

9.  A scenario for the hobo transposable element invasion, deduced from the structure of natural populations of Drosophila melanogaster using tandem TPE repeats.

Authors:  E Bonnivard; C Bazin; B Denis; D Higuet
Journal:  Genet Res       Date:  2000-02       Impact factor: 1.588

10.  Regulation of mariner transposition: the peculiar case of Mos1.

Authors:  Jérôme Jaillet; Murielle Genty; Jeanne Cambefort; Jacques-Deric Rouault; Corinne Augé-Gouillou
Journal:  PLoS One       Date:  2012-08-14       Impact factor: 3.240

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  11 in total

Review 1.  Horizontal acquisition of transposable elements and viral sequences: patterns and consequences.

Authors:  Clément Gilbert; Cédric Feschotte
Journal:  Curr Opin Genet Dev       Date:  2018-03-02       Impact factor: 5.578

Review 2.  The Intricate Evolutionary Balance between Transposable Elements and Their Host: Who Will Kick at Goal and Convert the Next Try?

Authors:  Marianne Yoth; Silke Jensen; Emilie Brasset
Journal:  Biology (Basel)       Date:  2022-05-06

3.  The Transposition Rate Has Little Influence on the Plateauing Level of the P-element.

Authors:  Robert Kofler; Viola Nolte; Christian Schlötterer
Journal:  Mol Biol Evol       Date:  2022-07-02       Impact factor: 8.800

4.  Fast co-evolution of anti-silencing systems shapes the invasiveness of Mu-like DNA transposons in eudicots.

Authors:  Taku Sasaki; Kyudo Ro; Erwann Caillieux; Riku Manabe; Grégoire Bohl-Viallefond; Pierre Baduel; Vincent Colot; Tetsuji Kakutani; Leandro Quadrana
Journal:  EMBO J       Date:  2022-03-14       Impact factor: 14.012

5.  Patterns of piRNA Regulation in Drosophila Revealed through Transposable Element Clade Inference.

Authors:  Iskander Said; Michael P McGurk; Andrew G Clark; Daniel A Barbash
Journal:  Mol Biol Evol       Date:  2022-01-07       Impact factor: 8.800

6.  Ecological networks to unravel the routes to horizontal transposon transfers.

Authors:  Samuel Venner; Vincent Miele; Christophe Terzian; Christian Biémont; Vincent Daubin; Cédric Feschotte; Dominique Pontier
Journal:  PLoS Biol       Date:  2017-02-15       Impact factor: 8.029

7.  Molecular dissection of a natural transposable element invasion.

Authors:  Robert Kofler; Kirsten-André Senti; Viola Nolte; Ray Tobler; Christian Schlötterer
Journal:  Genome Res       Date:  2018-04-30       Impact factor: 9.438

Review 8.  Ten things you should know about transposable elements.

Authors:  Guillaume Bourque; Kathleen H Burns; Mary Gehring; Vera Gorbunova; Andrei Seluanov; Molly Hammell; Michaël Imbeault; Zsuzsanna Izsvák; Henry L Levin; Todd S Macfarlan; Dixie L Mager; Cédric Feschotte
Journal:  Genome Biol       Date:  2018-11-19       Impact factor: 13.583

Review 9.  Taming, Domestication and Exaptation: Trajectories of Transposable Elements in Genomes.

Authors:  Pierre Capy
Journal:  Cells       Date:  2021-12-20       Impact factor: 6.600

10.  piRNA Clusters Need a Minimum Size to Control Transposable Element Invasions.

Authors:  Robert Kofler
Journal:  Genome Biol Evol       Date:  2020-05-01       Impact factor: 3.416

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