Literature DB >> 23994686

Transposase concentration controls transposition activity: myth or reality?

Solenne Bire1, Sophie Casteret, Ahmed Arnaoty, Benoît Piégu, Thierry Lecomte, Yves Bigot.   

Abstract

Deciphering the mechanisms underlying the regulation of DNA transposons might be central to understanding their function and dynamics in genomes. From results obtained under artificial experimental conditions, it has been proposed that some DNA transposons self-regulate their activity via overproduction inhibition (OPI), a mechanism by which transposition activity is down-regulated when the transposase is overconcentrated in cells. However, numerous studies have given contradictory results depending on the experimental conditions. Moreover, we do not know in which cellular compartment this phenomenon takes place, or whether transposases assemble to form dense foci when they are highly expressed in cells. In the present review, we focus on investigating the data available about eukaryotic transposons to explain the mechanisms underlying OPI. Data in the literature indicate that members of the IS630-Tc1-mariner, Hobo-Ac-Tam, and piggyBac superfamilies are able to use OPI to self-regulate their transposition activity in vivo in most eukaryotic cells, and that some of them are able to assemble so as to form higher order soluble oligomers. We also investigated the localization and behavior of GFP-fused transposases belonging to the mariner, Tc1-like, and piggyBac families, investigating their ability to aggregate in cells when they are overexpressed. Transposases are able to form dense foci when they are highly expressed. Moreover, the cellular compartments in which these foci are concentrated depend on the transposase, and on its expression. The data presented here suggest that sequestration in cytoplasmic or nucleoplasmic foci, or within the nucleoli, might protect the genome against the potentially genotoxic effects of the non-specific nuclease activities of eukaryotic transposases.
© 2013.

Entities:  

Keywords:  Dense foci; Hobo-Ac-Tam; IS630-Tc1-mariner; ITOC; ITRs; ITm; LEIA; OPI; Overproduction inhibition; STATOC; TEs; Transposase oligomers; Transposition; hAT; inhibition by transposase overconcentration; inverted terminal repeats; linear or exponential increase of transposition activity; overproduction inhibition; saturated transposition activity by transposase overconcentration; transposable elements

Mesh:

Substances:

Year:  2013        PMID: 23994686     DOI: 10.1016/j.gene.2013.08.039

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  9 in total

1.  Experimental evolution reveals hyperparasitic interactions among transposable elements.

Authors:  Émilie Robillard; Arnaud Le Rouzic; Zheng Zhang; Pierre Capy; Aurélie Hua-Van
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-05       Impact factor: 11.205

2.  Real-time transposable element activity in individual live cells.

Authors:  Neil H Kim; Gloria Lee; Nicholas A Sherer; K Michael Martini; Nigel Goldenfeld; Thomas E Kuhlman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-13       Impact factor: 11.205

3.  The folding of the specific DNA recognition subdomain of the sleeping beauty transposase is temperature-dependent and is required for its binding to the transposon DNA.

Authors:  Gage O Leighton; Tatiana A Konnova; Bulat Idiyatullin; Sophia H Hurr; Yuriy F Zuev; Irina V Nesmelova
Journal:  PLoS One       Date:  2014-11-06       Impact factor: 3.240

Review 4.  Retroviral vectors and transposons for stable gene therapy: advances, current challenges and perspectives.

Authors:  José Eduardo Vargas; Leonardo Chicaybam; Renato Tetelbom Stein; Amilcar Tanuri; Andrés Delgado-Cañedo; Martin H Bonamino
Journal:  J Transl Med       Date:  2016-10-12       Impact factor: 5.531

5.  Temporal self-regulation of transposition through host-independent transposase rodlet formation.

Authors:  Lauren E Woodard; Laura M Downes; Yi-Chien Lee; Aparna Kaja; Eyuel S Terefe; Matthew H Wilson
Journal:  Nucleic Acids Res       Date:  2016-11-28       Impact factor: 16.971

6.  Multimerization properties of PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements.

Authors:  Emeline Dubois; Nathalie Mathy; Vinciane Régnier; Julien Bischerour; Céline Baudry; Raphaëlle Trouslard; Mireille Bétermier
Journal:  Nucleic Acids Res       Date:  2017-04-07       Impact factor: 16.971

7.  Functional analysis of the catalytic triad of the hAT-family transposase TcBuster.

Authors:  Lauren E Woodard; Felisha M Williams; Isria C Jarrett; Matthew H Wilson
Journal:  Plasmid       Date:  2021-01-18       Impact factor: 3.466

8.  Mariner Transposons Contain a Silencer: Possible Role of the Polycomb Repressive Complex 2.

Authors:  Solenne Bire; Sophie Casteret; Benoît Piégu; Linda Beauclair; Nathalie Moiré; Peter Arensbuger; Yves Bigot
Journal:  PLoS Genet       Date:  2016-03-03       Impact factor: 5.917

9.  Maize Transposable Elements Ac/Ds as Insertion Mutagenesis Tools in Candida albicans.

Authors:  Kevin Mielich; Ella Shtifman-Segal; Julia C Golz; Guisheng Zeng; Yue Wang; Judith Berman; Reinhard Kunze
Journal:  G3 (Bethesda)       Date:  2018-03-28       Impact factor: 3.154

  9 in total

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