Literature DB >> 27924189

UNSUPERVISED SHAPE PRIOR MODELING FOR CELL SEGMENTATION IN NEUROENDOCRINE TUMOR.

Fuyong Xing1, Lin Yang2.   

Abstract

Automated and accurate cell segmentation provides support for many quantitative analyses on digitized neuroendocrine tumor (NET) images. It is a challenging task due to complex variations of cell characteristics. In this paper, we incorporate unsupervised shape priors into an efficient repulsive deformable model for automated cell segmentation on NET images. Unlike other supervised learning based shape models, which usually require a large number of annotated data for training, the proposed algorithm is an unsupervised approach that applies group similarity to shape constraints to avoid any labor intensive annotation. The algorithm is extensively tested on 51 NET images, and the comparative experiments with the state of the arts demonstrate the superior performance of this method using an unsupervised shape model.

Entities:  

Keywords:  Cell segmentation; NET; unsupervised shape prior

Year:  2015        PMID: 27924189      PMCID: PMC5136468          DOI: 10.1109/ISBI.2015.7164148

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  11 in total

1.  Robust segmentation of overlapping cells in histopathology specimens using parallel seed detection and repulsive level set.

Authors:  Xin Qi; Fuyong Xing; David J Foran; Lin Yang
Journal:  IEEE Trans Biomed Eng       Date:  2011-12-09       Impact factor: 4.538

2.  An integrated region-, boundary-, shape-based active contour for multiple object overlap resolution in histological imagery.

Authors:  Sahirzeeshan Ali; Anant Madabhushi
Journal:  IEEE Trans Med Imaging       Date:  2012-04-05       Impact factor: 10.048

3.  Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks.

Authors:  Hongmin Cai; Xiaoyin Xu; Ju Lu; Jeff W Lichtman; S P Yung; Stephen T C Wong
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

4.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

5.  Improved automatic detection and segmentation of cell nuclei in histopathology images.

Authors:  Yousef Al-Kofahi; Wiem Lassoued; William Lee; Badrinath Roysam
Journal:  IEEE Trans Biomed Eng       Date:  2009-10-30       Impact factor: 4.538

6.  Deformable segmentation via sparse representation and dictionary learning.

Authors:  Shaoting Zhang; Yiqiang Zhan; Dimitris N Metaxas
Journal:  Med Image Anal       Date:  2012-08-23       Impact factor: 8.545

7.  Robust selection-based sparse shape model for lung cancer image segmentation.

Authors:  Fuyong Xing; Lin Yang
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

8.  Partitioning histopathological images: an integrated framework for supervised color-texture segmentation and cell splitting.

Authors:  Hui Kong; Metin Gurcan; Kamel Belkacem-Boussaid
Journal:  IEEE Trans Med Imaging       Date:  2011-04-11       Impact factor: 10.048

9.  Multireference level set for the characterization of nuclear morphology in glioblastoma multiforme.

Authors:  Hang Chang; Ju Han; Paul T Spellman; Bahram Parvin
Journal:  IEEE Trans Biomed Eng       Date:  2012-09-10       Impact factor: 4.538

10.  Cell segmentation in phase contrast microscopy images via semi-supervised classification over optics-related features.

Authors:  Hang Su; Zhaozheng Yin; Seungil Huh; Takeo Kanade
Journal:  Med Image Anal       Date:  2013-04-29       Impact factor: 8.545

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  1 in total

Review 1.  Robust Nucleus/Cell Detection and Segmentation in Digital Pathology and Microscopy Images: A Comprehensive Review.

Authors:  Fuyong Xing; Lin Yang
Journal:  IEEE Rev Biomed Eng       Date:  2016-01-06
  1 in total

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