Literature DB >> 27918530

A probabilistic approach to demixing odors.

Agnieszka Grabska-Barwińska1,2, Simon Barthelmé3, Jeff Beck4, Zachary F Mainen5, Alexandre Pouget1,6,7, Peter E Latham1.   

Abstract

The olfactory system faces a hard problem: on the basis of noisy information from olfactory receptor neurons (the neurons that transduce chemicals to neural activity), it must figure out which odors are present in the world. Odors almost never occur in isolation, and different odors excite overlapping populations of olfactory receptor neurons, so the central challenge of the olfactory system is to demix its input. Because of noise and the large number of possible odors, demixing is fundamentally a probabilistic inference task. We propose that the early olfactory system uses approximate Bayesian inference to solve it. The computations involve a dynamical loop between the olfactory bulb and the piriform cortex, with cortex explaining incoming activity from the olfactory receptor neurons in terms of a mixture of odors. The model is compatible with known anatomy and physiology, including pattern decorrelation, and it performs better than other models at demixing odors.

Mesh:

Year:  2016        PMID: 27918530     DOI: 10.1038/nn.4444

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   24.884


  45 in total

1.  Representation of odorants by receptor neuron input to the mouse olfactory bulb.

Authors:  M Wachowiak; L B Cohen
Journal:  Neuron       Date:  2001-11-20       Impact factor: 17.173

2.  Activity-dependent gating of lateral inhibition in the mouse olfactory bulb.

Authors:  Armen C Arevian; Vikrant Kapoor; Nathaniel N Urban
Journal:  Nat Neurosci       Date:  2007-12-16       Impact factor: 24.884

3.  Neuronal activity of mitral-tufted cells in awake rats during passive and active odorant stimulation.

Authors:  Romulo A Fuentes; Marcelo I Aguilar; María L Aylwin; Pedro E Maldonado
Journal:  J Neurophysiol       Date:  2008-05-21       Impact factor: 2.714

4.  Sparse incomplete representations: a potential role of olfactory granule cells.

Authors:  Alexei A Koulakov; Dmitry Rinberg
Journal:  Neuron       Date:  2011-10-06       Impact factor: 17.173

5.  Decomposition of a mixture of signals in a model of the olfactory bulb.

Authors:  O Hendin; D Horn; J J Hopfield
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

Review 6.  Probabilistic brains: knowns and unknowns.

Authors:  Alexandre Pouget; Jeffrey M Beck; Wei Ji Ma; Peter E Latham
Journal:  Nat Neurosci       Date:  2013-08-18       Impact factor: 24.884

7.  Reading Out Olfactory Receptors: Feedforward Circuits Detect Odors in Mixtures without Demixing.

Authors:  Alexander Mathis; Dan Rokni; Vikrant Kapoor; Matthias Bethge; Venkatesh N Murthy
Journal:  Neuron       Date:  2016-09-01       Impact factor: 17.173

8.  Cortical Feedback Decorrelates Olfactory Bulb Output in Awake Mice.

Authors:  Gonzalo H Otazu; Honggoo Chae; Martin B Davis; Dinu F Albeanu
Journal:  Neuron       Date:  2015-06-04       Impact factor: 17.173

9.  Odorant responses of olfactory sensory neurons expressing the odorant receptor MOR23: a patch clamp analysis in gene-targeted mice.

Authors:  Xavier Grosmaitre; Anne Vassalli; Peter Mombaerts; Gordon M Shepherd; Minghong Ma
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-30       Impact factor: 11.205

10.  Encoding odorant identity by spiking packets of rate-invariant neurons in awake mice.

Authors:  Olivier Gschwend; Jonathan Beroud; Alan Carleton
Journal:  PLoS One       Date:  2012-01-17       Impact factor: 3.240

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  21 in total

1.  Spontaneous activity in the piriform cortex extends the dynamic range of cortical odor coding.

Authors:  Malinda L S Tantirigama; Helena H-Y Huang; John M Bekkers
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-14       Impact factor: 11.205

2.  Sodium and potassium conductances in principal neurons of the mouse piriform cortex: a quantitative description.

Authors:  Kaori Ikeda; Norimitsu Suzuki; John M Bekkers
Journal:  J Physiol       Date:  2018-10-14       Impact factor: 5.182

3.  Antagonism in olfactory receptor neurons and its implications for the perception of odor mixtures.

Authors:  Gautam Reddy; Joseph D Zak; Massimo Vergassola; Venkatesh N Murthy
Journal:  Elife       Date:  2018-04-24       Impact factor: 8.140

Review 4.  Believing in dopamine.

Authors:  Samuel J Gershman; Naoshige Uchida
Journal:  Nat Rev Neurosci       Date:  2019-09-30       Impact factor: 34.870

5.  State-dependent representations of mixtures by the olfactory bulb.

Authors:  Aliya Mari Adefuin; Sander Lindeman; Janine Kristin Reinert; Izumi Fukunaga
Journal:  Elife       Date:  2022-03-07       Impact factor: 8.140

6.  Rapid Bayesian learning in the mammalian olfactory system.

Authors:  Naoki Hiratani; Peter E Latham
Journal:  Nat Commun       Date:  2020-07-31       Impact factor: 14.919

7.  The maps they are a-changin': plasticity in odor representation in interneurons.

Authors:  Tobias Ackels; Andreas T Schaefer
Journal:  Nat Neurosci       Date:  2017-01-27       Impact factor: 24.884

Review 8.  Representations of uncertainty: where art thou?

Authors:  Ádám Koblinger; József Fiser; Máté Lengyel
Journal:  Curr Opin Behav Sci       Date:  2021-04

9.  A transcriptional rheostat couples past activity to future sensory responses.

Authors:  Tatsuya Tsukahara; David H Brann; Stan L Pashkovski; Grigori Guitchounts; Thomas Bozza; Sandeep Robert Datta
Journal:  Cell       Date:  2021-12-07       Impact factor: 41.582

10.  A theoretical framework for analyzing coupled neuronal networks: Application to the olfactory system.

Authors:  Andrea K Barreiro; Shree Hari Gautam; Woodrow L Shew; Cheng Ly
Journal:  PLoS Comput Biol       Date:  2017-10-02       Impact factor: 4.475

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