Literature DB >> 27890643

Coordination of DNA single strand break repair.

Rachel Abbotts1, David M Wilson2.   

Abstract

The genetic material of all organisms is susceptible to modification. In some instances, these changes are programmed, such as the formation of DNA double strand breaks during meiotic recombination to generate gamete variety or class switch recombination to create antibody diversity. However, in most cases, genomic damage is potentially harmful to the health of the organism, contributing to disease and aging by promoting deleterious cellular outcomes. A proportion of DNA modifications are caused by exogenous agents, both physical (namely ultraviolet sunlight and ionizing radiation) and chemical (such as benzopyrene, alkylating agents, platinum compounds and psoralens), which can produce numerous forms of DNA damage, including a range of "simple" and helix-distorting base lesions, abasic sites, crosslinks and various types of phosphodiester strand breaks. More significant in terms of frequency are endogenous mechanisms of modification, which include hydrolytic disintegration of DNA chemical bonds, attack by reactive oxygen species and other byproducts of normal cellular metabolism, or incomplete or necessary enzymatic reactions (such as topoisomerases or repair nucleases). Both exogenous and endogenous mechanisms are associated with a high risk of single strand breakage, either produced directly or generated as intermediates of DNA repair. This review will focus upon the creation, consequences and resolution of single strand breaks, with a particular focus on two major coordinating repair proteins: poly(ADP-ribose) polymerase 1 (PARP1) and X-ray repair cross-complementing protein 1 (XRCC1). Published by Elsevier Inc.

Entities:  

Keywords:  Aging; DNA repair; Neurodegeneration; Oxidative DNA damage; PARP1; XRCC1

Mesh:

Substances:

Year:  2016        PMID: 27890643      PMCID: PMC5443707          DOI: 10.1016/j.freeradbiomed.2016.11.039

Source DB:  PubMed          Journal:  Free Radic Biol Med        ISSN: 0891-5849            Impact factor:   7.376


  305 in total

1.  Base excision repair intermediates as topoisomerase II poisons.

Authors:  A M Wilstermann; N Osheroff
Journal:  J Biol Chem       Date:  2001-10-08       Impact factor: 5.157

Review 2.  Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids.

Authors:  Jean Cadet; Steffen Loft; Ryszard Olinski; Mark D Evans; Karol Bialkowski; J Richard Wagner; Peter C Dedon; Peter Møller; Marc M Greenberg; Marcus S Cooke
Journal:  Free Radic Res       Date:  2012-02-22

3.  Use of two-dimensional thin-layer chromatography for the components study of poly(adenosine diphosphate ribose).

Authors:  G Keith; J Desgrès; G de Murcia
Journal:  Anal Biochem       Date:  1990-12       Impact factor: 3.365

Review 4.  Poly-ADP-ribose polymerase: machinery for nuclear processes.

Authors:  Colin Thomas; Alexei V Tulin
Journal:  Mol Aspects Med       Date:  2013-04-25

5.  Genetic diversity of UV-sensitive DNA repair mutants of Chinese hamster ovary cells.

Authors:  L H Thompson; D B Busch; K Brookman; C L Mooney; D A Glaser
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205

6.  Poly(ADP-ribose) (PAR) binding to apoptosis-inducing factor is critical for PAR polymerase-1-dependent cell death (parthanatos).

Authors:  Yingfei Wang; No Soo Kim; Jean-Francois Haince; Ho Chul Kang; Karen K David; Shaida A Andrabi; Guy G Poirier; Valina L Dawson; Ted M Dawson
Journal:  Sci Signal       Date:  2011-04-05       Impact factor: 8.192

7.  Poly(ADP-ribose)-binding zinc finger motifs in DNA repair/checkpoint proteins.

Authors:  Ivan Ahel; Dragana Ahel; Takahiro Matsusaka; Allison J Clark; Jonathon Pines; Simon J Boulton; Stephen C West
Journal:  Nature       Date:  2008-01-03       Impact factor: 49.962

8.  RNase H2-initiated ribonucleotide excision repair.

Authors:  Justin L Sparks; Hyongi Chon; Susana M Cerritelli; Thomas A Kunkel; Erik Johansson; Robert J Crouch; Peter M Burgers
Journal:  Mol Cell       Date:  2012-08-02       Impact factor: 17.970

9.  PARP-1 inhibition increases mitochondrial metabolism through SIRT1 activation.

Authors:  Péter Bai; Carles Cantó; Hugues Oudart; Attila Brunyánszki; Yana Cen; Charles Thomas; Hiroyasu Yamamoto; Aline Huber; Borbála Kiss; Riekelt H Houtkooper; Kristina Schoonjans; Valérie Schreiber; Anthony A Sauve; Josiane Menissier-de Murcia; Johan Auwerx
Journal:  Cell Metab       Date:  2011-04-06       Impact factor: 27.287

10.  The structure and catalytic mechanism of a poly(ADP-ribose) glycohydrolase.

Authors:  Dea Slade; Mark S Dunstan; Eva Barkauskaite; Ria Weston; Pierre Lafite; Neil Dixon; Marijan Ahel; David Leys; Ivan Ahel
Journal:  Nature       Date:  2011-09-04       Impact factor: 49.962

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  64 in total

1.  RAD51 paralogs promote genomic integrity and chemoresistance in cancer by facilitating homologous recombination.

Authors:  Janelle Louise Harris; Andrea Rabellino; Kum Kum Khanna
Journal:  Ann Transl Med       Date:  2018-12

2.  Apurinic endonuclease-1 preserves neural genome integrity to maintain homeostasis and thermoregulation and prevent brain tumors.

Authors:  Lavinia C Dumitrache; Mikio Shimada; Susanna M Downing; Young Don Kwak; Yang Li; Jennifer L Illuzzi; Helen R Russell; David M Wilson; Peter J McKinnon
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-11       Impact factor: 11.205

3.  Role of Oxidation of XRCC1 Protein in Regulation of Mammalian DNA Repair Process.

Authors:  I A Vasil'eva; N A Moor; O I Lavrik
Journal:  Dokl Biochem Biophys       Date:  2020-03-04       Impact factor: 0.788

4.  Poly(ADP-ribose) polymerase 1 (PARP1) promotes oxidative stress-induced association of Cockayne syndrome group B protein with chromatin.

Authors:  Erica L Boetefuer; Robert J Lake; Kostiantyn Dreval; Hua-Ying Fan
Journal:  J Biol Chem       Date:  2018-09-28       Impact factor: 5.157

5.  PARP-1/PAR Activity in Cultured Human Lens Epithelial Cells Exposed to Two Levels of UVB Light.

Authors:  Caroline S Cencer; Shravan K Chintala; Tenira J Townsend; Daniel P Feldmann; Mirna A Awrow; Nahrain A Putris; Mason E Geno; Maria G Donovan; Frank J Giblin
Journal:  Photochem Photobiol       Date:  2017-09-15       Impact factor: 3.421

6.  The relationship between DNA single-stranded damage response and double-stranded damage response.

Authors:  Aiqing Ma; Xianhua Dai
Journal:  Cell Cycle       Date:  2018-01-02       Impact factor: 4.534

Review 7.  Roles of UVA radiation and DNA damage responses in melanoma pathogenesis.

Authors:  Aiman Q Khan; Jeffrey B Travers; Michael G Kemp
Journal:  Environ Mol Mutagen       Date:  2018-02-21       Impact factor: 3.216

8.  Oxidative DNA damage & repair: An introduction.

Authors:  Jean Cadet; Kelvin J A Davies
Journal:  Free Radic Biol Med       Date:  2017-03-28       Impact factor: 7.376

Review 9.  DNA Damage and Associated DNA Repair Defects in Disease and Premature Aging.

Authors:  Vinod Tiwari; David M Wilson
Journal:  Am J Hum Genet       Date:  2019-08-01       Impact factor: 11.025

Review 10.  Medicinal Thiols: Current Status and New Perspectives.

Authors:  Annalise R Pfaff; Justin Beltz; Emily King; Nuran Ercal
Journal:  Mini Rev Med Chem       Date:  2020       Impact factor: 3.862

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