Literature DB >> 27852673

Progress in Quantitative Viral Load Testing: Variability and Impact of the WHO Quantitative International Standards.

R T Hayden1, Y Sun2, L Tang2, G W Procop3, D R Hillyard4, B A Pinsky5, S A Young6,7, A M Caliendo8.   

Abstract

It has been hoped that the recent availability of WHO quantitative standards would improve interlaboratory agreement for viral load testing; however, insufficient data are available to evaluate whether this has been the case. Results from 554 laboratories participating in proficiency testing surveys for quantitative PCR assays of cytomegalovirus (CMV), Epstein-Barr virus (EBV), BK virus (BKV), adenovirus (ADV), and human herpesvirus 6 (HHV6) were evaluated to determine overall result variability and then were stratified by assay manufacturer. The impact of calibration to international units/ml (CMV and EBV) on variability was also determined. Viral loads showed a high degree of interlaboratory variability for all tested viruses, with interquartile ranges as high as 1.46 log10 copies/ml and the overall range for a given sample up to 5.66 log10 copies/ml. Some improvement in result variability was seen when international units were adopted. This was particularly the case for EBV viral load results. Variability in viral load results remains a challenge across all viruses tested here; introduction of international quantitative standards may help reduce variability and does so more or less markedly for certain viruses.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  PCR; WHO; calibration; quantitative; variability; viral load

Mesh:

Year:  2016        PMID: 27852673      PMCID: PMC5277511          DOI: 10.1128/JCM.02044-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  15 in total

1.  Multicenter evaluation of a commercial cytomegalovirus quantitative standard: effects of commutability on interlaboratory concordance.

Authors:  R T Hayden; M D Shahbazian; A Valsamakis; J Boonyaratanakornkit; L Cook; X L Pang; J K Preiksaitis; E R Schönbrunner; A M Caliendo
Journal:  J Clin Microbiol       Date:  2013-09-11       Impact factor: 5.948

Review 2.  International standards and reference materials for quantitative molecular infectious disease testing.

Authors:  Roberta M Madej; Jack Davis; Marcia J Holden; Stan Kwang; Emmanuel Labourier; George J Schneider
Journal:  J Mol Diagn       Date:  2010-01-14       Impact factor: 5.568

Review 3.  Molecular diagnostics: harmonization through reference materials, documentary standards and proficiency testing.

Authors:  Marcia J Holden; Roberta M Madej; Philip Minor; Lisa V Kalman
Journal:  Expert Rev Mol Diagn       Date:  2011-09       Impact factor: 5.225

4.  Comparative evaluation of three commercial quantitative cytomegalovirus standards by use of digital and real-time PCR.

Authors:  R T Hayden; Z Gu; S S Sam; Y Sun; L Tang; S Pounds; A M Caliendo
Journal:  J Clin Microbiol       Date:  2015-02-18       Impact factor: 5.948

5.  Harmonisation of Measurement Procedures: how do we get it done?

Authors:  Mary Lou Gantzer; W Greg Miller
Journal:  Clin Biochem Rev       Date:  2012-08

6.  Factors contributing to variability of quantitative viral PCR results in proficiency testing samples: a multivariate analysis.

Authors:  R T Hayden; X Yan; M T Wick; A B Rodriguez; X Xiong; C C Ginocchio; M J Mitchell; A M Caliendo
Journal:  J Clin Microbiol       Date:  2011-11-23       Impact factor: 5.948

7.  Multicenter comparison of different real-time PCR assays for quantitative detection of Epstein-Barr virus.

Authors:  R T Hayden; K M Hokanson; S B Pounds; M J Bankowski; S W Belzer; J Carr; D Diorio; M S Forman; Y Joshi; D Hillyard; R L Hodinka; M N Nikiforova; C A Romain; J Stevenson; A Valsamakis; H H Balfour
Journal:  J Clin Microbiol       Date:  2007-11-07       Impact factor: 5.948

8.  Marked variability of BK virus load measurement using quantitative real-time PCR among commonly used assays.

Authors:  Noah G Hoffman; Linda Cook; Ederlyn E Atienza; Ajit P Limaye; Keith R Jerome
Journal:  J Clin Microbiol       Date:  2008-06-18       Impact factor: 5.948

9.  A commutable cytomegalovirus calibrator is required to improve the agreement of viral load values between laboratories.

Authors:  Angela M Caliendo; Mona D Shahbazian; Carl Schaper; Jessica Ingersoll; Deborah Abdul-Ali; Jerry Boonyaratanakornkit; Xiao-Li Pang; Julie Fox; Jutta Preiksaitis; E Ralf Schönbrunner
Journal:  Clin Chem       Date:  2009-07-02       Impact factor: 8.327

10.  Commutability of the Epstein-Barr virus WHO international standard across two quantitative PCR methods.

Authors:  Janaki Abeynayake; Ryan Johnson; Paolo Libiran; Malaya K Sahoo; Hongbin Cao; Raffick Bowen; K C Allen Chan; Quynh-Thu Le; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2014-07-30       Impact factor: 5.948

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  20 in total

Review 1.  Standardization of Nucleic Acid Tests: the Approach of the World Health Organization.

Authors:  S A Baylis; P Wallace; E McCulloch; H G M Niesters; C M Nübling
Journal:  J Clin Microbiol       Date:  2019-01-02       Impact factor: 5.948

Review 2.  Persistent Challenges of Interassay Variability in Transplant Viral Load Testing.

Authors:  R T Hayden; A M Caliendo
Journal:  J Clin Microbiol       Date:  2020-09-22       Impact factor: 5.948

3.  Calibration of BK Virus Nucleic Acid Amplification Testing to the 1st WHO International Standard for BK Virus.

Authors:  Susanna K Tan; Stephen Milligan; Malaya K Sahoo; Nathaniel Taylor; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2017-01-04       Impact factor: 5.948

4.  High prevalence of asymptomatic CMV shedding in healthy children attending the minnesota state fair.

Authors:  Jennifer M Geris; Logan G Spector; Michelle Roesler; Nelmary Hernandez-Alvarado; Mark Blackstad; Heather H Nelson; Mark R Schleiss
Journal:  J Clin Virol       Date:  2022-02-07       Impact factor: 3.168

5.  Matrix Matters: Assessment of Commutability among BK Virus Assays and Standards.

Authors:  R T Hayden; Y Su; J Boonyaratanakornkit; L Cook; Z Gu; K R Jerome; B A Pinsky; S S Sam; S K Tan; H Zhu; L Tang; A M Caliendo
Journal:  J Clin Microbiol       Date:  2022-08-23       Impact factor: 11.677

6.  Fragment Size-Based Enrichment of Viral Sequences in Plasma Cell-Free DNA.

Authors:  Quynh Phung; Michelle J Lin; Hong Xie; Alexander L Greninger
Journal:  J Mol Diagn       Date:  2022-02-22       Impact factor: 5.341

7.  Cytomegalovirus Viremia Associated With Increased Mortality in Cryptococcal Meningitis in Sub-Saharan Africa.

Authors:  Caleb Skipper; Mark R Schleiss; Ananta S Bangdiwala; Nelmary Hernandez-Alvarado; Kabanda Taseera; Henry W Nabeta; Abdu K Musubire; Sarah M Lofgren; Darin L Wiesner; Joshua Rhein; Radha Rajasingham; Charlotte Schutz; Graeme Meintjes; Conrad Muzoora; David B Meya; David R Boulware
Journal:  Clin Infect Dis       Date:  2020-07-27       Impact factor: 9.079

Review 8.  Progress and Challenges in the Prevention, Diagnosis, and Management of Cytomegalovirus Infection in Transplantation.

Authors:  Ajit P Limaye; Tara M Babu; Michael Boeckh
Journal:  Clin Microbiol Rev       Date:  2020-10-28       Impact factor: 26.132

9.  Impact of Fragmentation on Commutability of Epstein-Barr Virus and Cytomegalovirus Quantitative Standards.

Authors:  R T Hayden; L Tang; Y Su; L Cook; Z Gu; K R Jerome; J Boonyaratanakornkit; S Sam; S Pounds; A M Caliendo
Journal:  J Clin Microbiol       Date:  2019-12-23       Impact factor: 11.677

Review 10.  CMV Infection in Hematopoietic Stem Cell Transplantation: Prevention and Treatment Strategies.

Authors:  Niyati Jakharia; Dianna Howard; David J Riedel
Journal:  Curr Treat Options Infect Dis       Date:  2021-07-21
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